Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p18410 Brassica napus HOM05D004523 ORTHO05D024032 6.3e-54 213.8 102 100.0
CARHR020380 Cardamine hirsuta HOM05D004523 ORTHO05D006021 2.7e-33 145.2 78 87.2
Thhalv10007331m.g Eutrema salsugineum HOM05D004523 ORTHO05D006021 3.6e-33 144.8 78 88.5
Sp1g17680 Schrenkiella parvula HOM05D004523 ORTHO05D006021 4.7e-33 144.4 81 86.4
BcaB07g32006 Brassica carinata HOM05D004523 ORTHO05D006021 5.7e-31 137.5 66 93.9
Carub.0001s1940 Capsella rubella HOM05D004523 ORTHO05D006021 9.8e-31 136.7 78 80.8
Aa31LG7G4380 Aethionema arabicum HOM05D004523 ORTHO05D006021 1.3e-30 136.3 80 78.8
Haze_22594 Corylus avellana HOM05D004523 ORTHO05D006021 1.7e-30 136.0 80 76.2
AL1G32610 Arabidopsis lyrata HOM05D004523 ORTHO05D006021 3.7e-30 134.8 78 80.8
AT1G19880 Arabidopsis thaliana HOM05D004523 ORTHO05D006021 3.7e-30 134.8 78 80.8
C07p23650 Brassica napus HOM05D004523 ORTHO05D006021 3.7e-30 134.8 78 82.1
Cfa013919 Carpinus fangiana HOM05D004523 ORTHO05D006021 4.8e-30 134.4 80 76.2
A07p16200 Brassica napus HOM05D004523 ORTHO05D006021 1.1e-29 133.3 76 82.9
BraA07t29346Z Brassica rapa HOM05D004523 ORTHO05D006021 1.1e-29 133.3 76 82.9
BcaB03g14360 Brassica carinata HOM05D004523 ORTHO05D006021 1.4e-29 132.9 81 79.0
BolC7t42897H Brassica oleracea HOM05D004523 ORTHO05D006021 1.4e-29 132.9 81 79.0
BcaC05g25884 Brassica carinata HOM05D004523 ORTHO05D024032 1.8e-29 132.5 63 100.0
Duzib093G2179 Durio zibethinus HOM05D004523 ORTHO05D006021 1.8e-29 132.5 82 73.2
Phvul.009G015100 Phaseolus vulgaris HOM05D004523 ORTHO05D006021 5.4e-29 131.0 81 74.1
Gohir.D06G001500 Gossypium hirsutum HOM05D004523 ORTHO05D006021 9.1e-29 130.2 81 70.4
Gorai.010G005900 Gossypium raimondii HOM05D004523 ORTHO05D006021 9.1e-29 130.2 81 70.4
Cpa.g.sc26.20 Carica papaya HOM05D004523 ORTHO05D006021 1.2e-28 129.8 79 70.9
Lj1g0008508 Lotus japonicus HOM05D004523 ORTHO05D006021 1.2e-28 129.8 84 72.6
Thecc.08G039300 Theobroma cacao HOM05D004523 ORTHO05D006021 1.6e-28 129.4 78 74.4
VMungo1309G0339 Vigna mungo HOM05D004523 ORTHO05D006021 2.7e-28 128.6 81 74.1
FvH4_2g38830 Fragaria vesca HOM05D004523 ORTHO05D006021 3.5e-28 128.3 80 71.2
GSVIVG01009847001 Vitis vinifera HOM05D004523 ORTHO05D006021 3.5e-28 128.3 80 71.2
Glyma.06G025900 Glycine max HOM05D004523 ORTHO05D006021 4.5e-28 127.9 85 69.4
Prupe.1G369200 Prunus persica HOM05D004523 ORTHO05D006021 4.5e-28 127.9 83 71.1
BraA06t24714Z Brassica rapa HOM05D004523 ORTHO05D006021 5.9e-28 127.5 82 76.8
Glyma.04G026100 Glycine max HOM05D004523 ORTHO05D006021 5.9e-28 127.5 83 71.1
Eucgr.F02093 Eucalyptus grandis HOM05D004523 ORTHO05D006021 7.7e-28 127.1 80 71.2
arahy.Tifrunner.gnm1.ann1.22W300 Arachis hypogaea HOM05D004523 ORTHO05D006021 1.0e-27 126.7 82 69.5
Ca_02055_v3 Cicer arietinum L. HOM05D004523 ORTHO05D006021 1.0e-27 126.7 81 72.8
Gohir.A06G005700 Gossypium hirsutum HOM05D004523 ORTHO05D006021 1.3e-27 126.3 81 69.1
QL02p010964 Quercus lobata HOM05D004523 ORTHO05D006021 1.3e-27 126.3 84 69.0
Ciclev10000798m.g Citrus clementina HOM05D004523 ORTHO05D006021 1.7e-27 125.9 80 70.0
Potri.002G026600 Populus trichocarpa HOM05D004523 ORTHO05D006021 1.7e-27 125.9 81 72.8
arahy.Tifrunner.gnm1.ann1.F7HX5D Arachis hypogaea HOM05D004523 ORTHO05D006021 2.3e-27 125.6 82 69.5
RcHm_v2.0_Chr6g0302441 Rosa chinensis HOM05D004523 ORTHO05D006021 2.3e-27 125.6 82 68.3
CANSAT25G1932 Cannabis sativa HOM05D004523 ORTHO05D006021 2.9e-27 125.2 81 67.9
CsaV3_3G045630 Cucumis sativus L. HOM05D004523 ORTHO05D006021 2.9e-27 125.2 77 72.7
Manes.18G016300 Manihot esculenta HOM05D004523 ORTHO05D006021 2.9e-27 125.2 81 71.6
TPR.G30285 Trifolium pratense HOM05D004523 ORTHO05D006021 3.8e-27 124.8 81 71.6
MELO3C003774.2 Cucumis melo HOM05D004523 ORTHO05D006021 5.0e-27 124.4 77 71.4
BcaB03g14429 Brassica carinata HOM05D004523 ORTHO05D006021 6.5e-27 124.0 65 84.6
Medtr3g113250 Medicago truncatula HOM05D004523 ORTHO05D006021 6.5e-27 124.0 76 71.1
EL10Ac1g00454 Beta vulgaris HOM05D004523 ORTHO05D006021 8.6e-27 123.6 79 72.2
Dinv31821 Davidia involucrata HOM05D004523 ORTHO05D006021 1.1e-26 123.2 99 60.6
Sed0024533 Sechium edule HOM05D004523 ORTHO05D006021 1.1e-26 123.2 78 69.2
CiPaw.07G152800 Carya illinoinensis HOM05D004523 ORTHO05D006021 1.5e-26 122.9 69 78.3
Lalb_Chr08g0246121 Lupinus albus HOM05D004523 ORTHO05D006021 1.5e-26 122.9 81 67.9
Manes.05G151200 Manihot esculenta HOM05D004523 ORTHO05D006021 1.5e-26 122.9 76 72.4
THA.LOC104809379 Tarenaya hassleriana HOM05D004523 ORTHO05D006021 1.5e-26 122.9 80 72.5
TWI56G1290 Tripterygium wilfordii HOM05D004523 ORTHO05D006021 1.5e-26 122.9 82 68.3
AUR62014404 Chenopodium quinoa HOM05D004523 ORTHO05D006021 1.9e-26 122.5 81 67.9
AUR62019141 Chenopodium quinoa HOM05D004523 ORTHO05D006021 1.9e-26 122.5 81 67.9
Cc10_g01960 Coffea canephora HOM05D004523 ORTHO05D006021 1.9e-26 122.5 81 70.4
Sabra05G0182400 Salix brachista HOM05D004523 ORTHO05D006021 1.9e-26 122.5 82 69.5
Sed0001890 Sechium edule HOM05D004523 ORTHO05D006021 1.9e-26 122.5 78 69.2
MD15G1014900 Malus domestica HOM05D004523 ORTHO05D006021 4.2e-26 121.3 79 67.1
Lj4A28G65 Lonicera japonica HOM05D004523 ORTHO05D006021 5.5e-26 120.9 80 68.8
Atru.chr13.334 Acer truncatum HOM05D004523 ORTHO05D006021 9.5e-26 120.2 75 69.3
Aqoxy6G02327 Aquilegia oxysepala HOM05D004523 ORTHO05D006021 9.5e-26 120.2 79 70.9
CSS0014696 Camellia sinensis var. sinensis HOM05D004523 ORTHO05D006021 9.5e-26 120.2 80 67.5
MD08G1015900 Malus domestica HOM05D004523 ORTHO05D006021 9.5e-26 120.2 72 70.8
Sc02g0004880 Simmondsia chinensis HOM05D004523 ORTHO05D006021 9.5e-26 120.2 81 67.9
DCAR_022439 Daucus carota HOM05D004523 ORTHO05D006021 1.2e-25 119.8 80 68.8
Psat5g014360 Pisum sativum HOM05D004523 ORTHO05D006021 1.6e-25 119.4 83 66.3
CANSAT80G1473 Cannabis sativa HOM05D004523 ORTHO05D006021 2.1e-25 119.0 77 67.5
Potri.005G236000 Populus trichocarpa HOM05D004523 ORTHO05D006021 2.1e-25 119.0 82 65.9
Gohir.D05G259000 Gossypium hirsutum HOM05D004523 ORTHO05D006021 2.8e-25 118.6 65 76.9
Gorai.009G270600 Gossypium raimondii HOM05D004523 ORTHO05D006021 2.8e-25 118.6 65 76.9
Dinv39495 Davidia involucrata HOM05D004523 ORTHO05D006021 3.6e-25 118.2 76 69.7
HanXRQChr02g0044011 Helianthus annuus HOM05D004523 ORTHO05D006021 4.7e-25 117.9 79 68.4
Lsat_1_v5_gn_1_16121 Lactuca sativa HOM05D004523 ORTHO05D006021 4.7e-25 117.9 80 68.8
Lalb_Chr11g0062021 Lupinus albus HOM05D004523 ORTHO05D006021 4.7e-25 117.9 75 68.0
PGR031G3749 Punica granatum HOM05D004523 ORTHO05D006021 6.1e-25 117.5 78 66.7
COL.COLO4_26176 Corchorus olitorius HOM05D004523 ORTHO05D006021 1.4e-24 116.3 77 68.8
Gohir.A05G257600 Gossypium hirsutum HOM05D004523 ORTHO05D006021 1.4e-24 116.3 64 76.6
Actinidia15399 Actinidia chinensis HOM05D004523 ORTHO05D006021 1.8e-24 115.9 76 67.1
Nn5g29261 Nelumbo nucifera HOM05D004523 ORTHO05D006021 1.8e-24 115.9 77 67.5
TAR376G0074 Trochodendron aralioides HOM05D004523 ORTHO05D006021 1.8e-24 115.9 77 68.8
Hund17232 Selenicereus undatus HOM05D004523 ORTHO05D006021 2.3e-24 115.5 76 68.4
MSTRG.25223 Avicennia marina HOM05D004523 ORTHO05D006021 3.0e-24 115.2 76 67.1
Solyc04g081200.3 Solanum lycopersicum HOM05D004523 ORTHO05D006021 3.0e-24 115.2 66 74.2
Sopen04g034810 Solanum pennellii HOM05D004523 ORTHO05D006021 3.0e-24 115.2 66 74.2
PGSC0003DMG400003721 Solanum tuberosum HOM05D004523 ORTHO05D006021 3.0e-24 115.2 66 74.2
Nn6g32283 Nelumbo nucifera HOM05D004523 ORTHO05D006021 4.0e-24 114.8 77 68.8
PSO675G7270 Papaver somniferum HOM05D004523 ORTHO05D006021 5.2e-24 114.4 76 68.4
Peaxi162Scf00287g01630 Petunia axillaris HOM05D004523 ORTHO05D006021 5.2e-24 114.4 81 66.7
SalBow7G1964 Salvia bowleyana HOM05D004523 ORTHO05D006021 5.2e-24 114.4 78 64.1
Migut.C00821 Erythranthe guttata HOM05D004523 ORTHO05D006021 1.2e-23 113.2 81 64.2
Hma1.2p1_1339F.1_g276600 Hydrangea macrophylla HOM05D004523 ORTHO05D006021 1.2e-23 113.2 84 63.1
MSTRG.1214 Avicennia marina HOM05D004523 ORTHO05D006021 2.0e-23 112.5 81 64.2
CAN.G1271.10 Capsicum annuum HOM05D004523 ORTHO05D006021 2.0e-23 112.5 66 72.7
SGA_v2.0_scaffold92G28268 Striga asiatica HOM05D004523 ORTHO05D006021 2.6e-23 112.1 75 62.7
HanXRQChr04g0106361 Helianthus annuus HOM05D004523 ORTHO05D006021 3.4e-23 111.7 74 64.9
SGA_v2.0_scaffold11G05887 Striga asiatica HOM05D004523 ORTHO05D006021 5.7e-23 110.9 75 64.0
CDE09G0069 Ceratophyllum demersum HOM05D004523 ORTHO05D006021 7.5e-23 110.5 102 57.8
TAR625G0232 Trochodendron aralioides HOM05D004523 ORTHO05D006021 3.7e-22 108.2 79 64.6
MBI09_g35920_MAGBIO Magnolia biondii HOM05D004523 ORTHO05D006021 1.8e-21 105.9 79 59.5
ATR0147G022 Amborella trichopoda HOM05D004523 ORTHO05D006021 3.1e-21 105.1 81 60.5
PSO782G5581 Papaver somniferum HOM05D004523 ORTHO05D006021 3.1e-21 105.1 78 64.1
PSO782G4507 Papaver somniferum HOM05D004523 ORTHO05D006021 5.4e-21 104.4 77 67.5
ECA232G3022 Erigeron canadensis HOM05D004523 ORTHO05D006021 1.6e-20 102.8 76 61.8
HPP92_024533 Vanilla planifolia HOM05D004523 ORTHO05D006021 2.0e-20 102.4 77 59.7
Lsat_1_v5_gn_4_114800 Lactuca sativa HOM05D004523 ORTHO05D006021 3.5e-20 101.7 81 60.5
ECA247G3421 Erigeron canadensis HOM05D004523 ORTHO05D006021 4.5e-20 101.3 73 65.8
PSO478G0253 Papaver somniferum HOM05D004523 ORTHO05D006021 1.0e-19 100.1 75 64.0
Os04g0662800 Oryza sativa ssp. japonica HOM05D004523 ORTHO05D006021 1.3e-19 99.8 83 55.4
Rhsim07G0245600 Rhododendron simsii HOM05D004523 ORTHO05D006021 3.8e-19 98.2 81 59.3
SEGI_17732 Sequoiadendron giganteum HOM05D004523 ORTHO05D024032 5.0e-19 97.8 77 58.4
SEGI_37381 Sequoiadendron giganteum HOM05D004523 ORTHO05D006021 5.0e-19 97.8 77 58.4
CSS0004717 Camellia sinensis var. sinensis HOM05D004523 ORTHO05D006021 1.2e-17 93.2 81 61.7
FAN15G3344 Fragaria x ananassa HOM05D004523 ORTHO05D006021 4.7e-17 91.3 62 66.1
FAN27G1233 Fragaria x ananassa HOM05D004523 ORTHO05D006021 4.7e-17 91.3 62 66.1
Sabra02G0020700 Salix brachista HOM05D004523 ORTHO05D006021 8.0e-17 90.5 63 68.3
ClCG05G018540 Citrullus lanatus HOM05D004523 ORTHO05D006021 6.8e-16 87.4 60 63.3
Mapoly0046s0091 Marchantia polymorpha HOM05D004523 ORTHO05D006021 2.6e-15 85.5 68 55.9
Pp3c23_7830 Physcomitrium patens HOM05D004523 ORTHO05D006021 4.9e-14 81.3 77 50.6
Oeu007048.1 Olea europaea HOM05D004523 ORTHO05D006021 8.3e-14 80.5 60 63.3
unitig_32.g11145 Utricularia gibba HOM05D004523 ORTHO05D006021 1.1e-13 80.1 84 47.6
Nitab4.5_0005185g0050 Nicotiana tabacum HOM05D004523 ORTHO05D006021 9.2e-13 77.0 62 62.9
Oeu007351.3 Olea europaea HOM05D004523 ORTHO05D006021 3.5e-12 75.1 65 55.4
CDE02G0589 Ceratophyllum demersum HOM05D004523 ORTHO05D024032 5.0e-11 71.2 65 53.8
CBR_g15958 Chara braunii HOM05D004523 ORTHO05D006021 1.9e-10 69.3 97 40.2
SMO164G0139 Selaginella moellendorffii HOM05D004523 ORTHO05D006021 4.7e-09 64.7 58 53.4
MCO09G275 Micromonas commoda HOM05D004523 ORTHO05D006021 1.1e-08 63.5 91 36.3
vmacro04335 Vaccinium macrocarpon HOM05D004523 ORTHO05D006021 1.4e-08 63.2 61 54.1
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 1.8e-08 62.8 79 43.0
A06p16090 Brassica napus HOM05D004523 ORTHO05D006021 2.6e-07 58.9 76 46.1


User provided reference genes

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