Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 7.8e-184 647.1 357 100.0
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 1.3e-183 646.4 356 99.7
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 2.3e-175 619.0 359 93.3
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 1.1e-174 616.7 359 92.8
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 9.3e-161 570.5 360 86.1
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.7e-154 549.7 367 79.0
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 4.9e-154 548.1 367 80.4
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.5e-150 536.6 362 80.1
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 1.1e-148 530.4 367 78.5
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.8e-135 486.5 371 72.2
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.3e-130 470.3 363 69.1
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 2.9e-130 469.2 265 89.1
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 9.1e-124 447.6 367 65.1
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 2.6e-123 446.0 365 65.5
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.0e-122 444.1 370 65.4
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.1e-121 440.7 360 66.9
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 6.1e-120 434.9 363 64.7
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 3.9e-119 432.2 360 66.7
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 1.2e-115 420.6 362 63.5
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 4.5e-115 418.7 362 63.0
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 2.2e-114 416.4 365 63.8
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 2.5e-113 412.9 407 57.5
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 9.4e-113 411.0 405 57.5
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 2.7e-112 409.5 362 62.4
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 2.7e-112 409.5 362 62.4
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 1.4e-111 407.1 357 61.3
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 1.4e-111 407.1 359 62.4
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 4.4e-102 375.6 366 56.3
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 9.7e-102 374.4 260 70.8
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 2.8e-101 372.9 266 68.4
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 2.8e-101 372.9 388 53.9
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 3.7e-101 372.5 266 68.8
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 6.3e-101 371.7 271 66.4
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 1.4e-100 370.5 266 69.2
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 1.8e-100 370.2 389 52.4
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.8e-100 370.2 265 69.1
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.8e-100 370.2 265 68.7
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 2.4e-100 369.8 262 69.8
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.4e-100 369.8 366 55.7
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 3.1e-100 369.4 347 55.6
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 4.1e-100 369.0 388 53.6
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 5.3e-100 368.6 262 69.1
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 5.3e-100 368.6 256 69.1
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 2.7e-99 366.3 266 68.4
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 3.5e-99 365.9 271 67.5
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 4.5e-99 365.5 389 52.7
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 7.7e-99 364.8 265 67.2
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 1.0e-98 364.4 381 51.7
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.0e-98 364.4 258 67.8
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 1.7e-98 363.6 381 51.7
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.7e-98 363.6 257 68.5
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 2.2e-98 363.2 378 52.6
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.9e-98 362.8 264 69.3
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 2.9e-98 362.8 260 70.0
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 5.0e-98 362.1 253 70.0
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 5.0e-98 362.1 259 69.9
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 8.5e-98 361.3 253 70.0
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 8.5e-98 361.3 260 69.2
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 8.5e-98 361.3 363 53.4
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 1.1e-97 360.9 263 67.3
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 1.1e-97 360.9 260 68.5
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.5e-97 360.5 253 69.6
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 1.9e-97 360.1 390 50.3
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 3.2e-97 359.4 266 66.2
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 3.2e-97 359.4 266 66.2
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 5.5e-97 358.6 261 69.0
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 5.5e-97 358.6 386 52.1
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 1.2e-96 357.5 257 67.3
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 2.1e-96 356.7 268 66.4
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 2.1e-96 356.7 260 68.8
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 4.7e-96 355.5 266 66.9
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 4.7e-96 355.5 260 66.5
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 6.1e-96 355.1 267 66.3
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 1.8e-95 353.6 257 65.8
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 4.0e-95 352.4 261 68.2
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 8.8e-95 351.3 364 54.1
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 7.5e-94 348.2 261 66.7
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 9.8e-94 347.8 261 66.7
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 1.3e-93 347.4 255 67.8
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 1.7e-93 347.1 259 67.6
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 2.2e-93 346.7 266 63.5
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 8.3e-93 344.7 269 62.5
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 2.7e-91 339.7 268 63.8
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 2.2e-90 336.7 217 77.4
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 2.9e-90 336.3 260 62.7
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 6.5e-90 335.1 256 64.8
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 2.5e-89 333.2 253 66.4
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 7.2e-89 331.6 253 66.0
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.2e-88 330.9 263 63.5
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 1.2e-88 330.9 266 63.5
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.2e-88 330.9 253 66.0
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.6e-88 330.5 266 62.4
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 1.6e-88 330.5 260 63.1
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 2.8e-88 329.7 261 63.6
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 6.1e-88 328.6 266 63.2
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 6.1e-88 328.6 266 63.2
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 6.8e-87 325.1 250 61.6
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 8.8e-87 324.7 252 63.9
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.6e-86 323.2 255 61.6
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 3.4e-86 322.8 255 61.6
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 1.6e-83 313.9 268 57.5
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 2.0e-83 313.5 263 59.3
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 1.7e-82 310.5 258 58.1
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 2.9e-82 309.7 261 60.9
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 5.0e-82 308.9 267 59.9
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 6.6e-82 308.5 380 46.8
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 8.6e-82 308.1 259 58.7
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 2.8e-80 303.1 254 57.9
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 1.8e-79 300.4 251 57.0
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.8e-79 300.4 237 64.1
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 1.7e-77 293.9 252 55.6
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.9e-77 293.1 245 59.6
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 9.2e-76 288.1 360 43.9
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 1.2e-75 287.7 266 53.4
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.6e-75 287.3 245 58.8
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 2.0e-75 287.0 252 56.7
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 2.0e-75 287.0 272 54.4
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 3.0e-74 283.1 270 51.9
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 4.3e-73 279.3 255 56.1
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 4.1e-68 262.7 248 55.6
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 7.0e-68 261.9 263 50.6
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 4.7e-64 249.2 178 67.4
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 4.9e-61 239.2 259 49.0
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 4.6e-59 232.6 260 47.7
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 1.5e-57 227.6 235 55.7
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.8e-55 220.7 303 40.6
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 9.9e-54 214.9 303 38.3
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 2.4e-52 210.3 267 43.8
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 5.4e-52 209.1 300 39.7
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 2.1e-51 207.2 117 87.2
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.9e-50 203.0 293 37.9
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 2.4e-47 193.7 98 99.0
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 7.6e-22 109.0 51 100.0
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 2.0e-06 57.8 122 30.3
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 5.9e-06 56.2 101 33.7


User provided reference genes

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