Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p15730 Brassica napus HOM05D004375 ORTHO05D028061 4.1e-104 381.3 184 100.0
C02p40620 Brassica napus HOM05D004375 ORTHO05D028061 1.2e-84 316.6 184 85.3
BolC2t10082H Brassica oleracea HOM05D004375 ORTHO05D028061 5.8e-74 281.2 170 83.5
BolC5t30279H Brassica oleracea HOM05D004375 ORTHO05D028061 2.3e-70 269.2 129 100.0
C06p19530 Brassica napus HOM05D004375 ORTHO05D008558 9.0e-43 177.6 92 92.4
BcaC01g06041 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-19 99.8 52 86.5
BolC9t58077H Brassica oleracea HOM05D004375 ORTHO05D027250 7.7e-18 94.7 52 82.7
C09p52110 Brassica napus HOM05D004375 ORTHO05D027250 2.2e-17 93.2 52 80.8
BcaB01g03337 Brassica carinata HOM05D004375 ORTHO05D016039 1.4e-16 90.5 52 78.8
BcaB06g26129 Brassica carinata HOM05D004375 ORTHO05D016039 1.4e-16 90.5 52 78.8
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 3.2e-16 89.4 52 78.8
BcaC03g14455 Brassica carinata HOM05D004375 ORTHO05D027250 7.2e-16 88.2 52 76.9
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 7.2e-16 88.2 52 75.0
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 7.2e-16 88.2 49 79.6
C03p82430 Brassica napus HOM05D004375 ORTHO05D027250 1.6e-15 87.0 52 76.9
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-15 86.7 52 73.1
BcaC03g15252 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-15 86.7 52 73.1
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 2.1e-15 86.7 52 73.1
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 2.1e-15 86.7 52 73.1
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 2.1e-15 86.7 52 73.1
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 2.7e-15 86.3 52 67.3
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 3.6e-15 85.9 52 73.1
BcaB01g03413 Brassica carinata HOM05D004375 ORTHO05D000395 4.7e-15 85.5 52 71.2
BcaB05g23867 Brassica carinata HOM05D004375 ORTHO05D008558 6.1e-15 85.1 52 65.4
A04p02330 Brassica napus HOM05D004375 ORTHO05D008558 6.1e-15 85.1 52 69.2
BolC2t08885H Brassica oleracea HOM05D004375 ORTHO05D008558 6.1e-15 85.1 52 71.2
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 1.0e-14 84.3 52 71.2
C09p31570 Brassica napus HOM05D004375 ORTHO05D008558 1.8e-14 83.6 52 69.2
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 1.8e-14 83.6 52 69.2
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 3.0e-14 82.8 52 69.2
BcaB05g22559 Brassica carinata HOM05D004375 ORTHO05D008558 5.1e-14 82.0 52 67.3
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 5.1e-14 82.0 52 67.3
BcaC09g50012 Brassica carinata HOM05D004375 ORTHO05D016090 6.7e-14 81.6 52 65.4
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 6.7e-14 81.6 52 69.2
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 6.7e-14 81.6 52 69.2
BolC7t43340H Brassica oleracea HOM05D004375 ORTHO05D032088 8.8e-14 81.3 52 69.2
BcaC03g14982 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-13 80.5 52 65.4
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-13 80.5 52 67.3
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 1.5e-13 80.5 52 67.3
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-13 80.1 52 65.4
A03p67640 Brassica napus HOM05D004375 ORTHO05D008558 2.6e-13 79.7 52 65.4
BolC2t07029H Brassica oleracea HOM05D004375 ORTHO05D008558 3.3e-13 79.3 52 69.2
BcaC02g10129 Brassica carinata HOM05D004375 ORTHO05D008558 5.7e-13 78.6 52 65.4
BcaC05g26718 Brassica carinata HOM05D004375 ORTHO05D008558 7.4e-13 78.2 52 63.5
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 9.7e-13 77.8 52 61.5
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-12 77.4 52 63.5
BcaB05g23103 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-12 77.4 52 61.5
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-12 77.4 52 63.5
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 1.3e-12 77.4 57 59.6
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 2.2e-12 76.6 54 57.4
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 2.8e-12 76.3 52 61.5
BcaB05g24369 Brassica carinata HOM05D004375 ORTHO05D000395 8.2e-12 74.7 52 61.5
BcaC03g14060 Brassica carinata HOM05D004375 ORTHO05D024058 1.1e-11 74.3 52 59.6
BolC2t07404H Brassica oleracea HOM05D020498 ORTHO05D027565 1.1e-11 74.3 52 59.6
BcaB01g02236 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-11 73.9 42 71.4
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 3.1e-11 72.8 54 59.3
C09p70730 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-10 70.9 52 57.7
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-10 70.5 43 69.8
BraA05t20802Z Brassica rapa HOM05D004375 ORTHO05D008558 1.6e-10 70.5 43 69.8
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 5.9e-10 68.6 36 80.6
BcaB03g16500 Brassica carinata HOM05D004375 ORTHO05D008558 1.9e-08 63.5 43 62.8
C07p35610 Brassica napus HOM05D004375 ORTHO05D042908 6.7e-06 55.1 36 69.4
BolC7t44084H Brassica oleracea HOM05D004375 ORTHO05D042908 6.7e-06 55.1 36 69.4


User provided reference genes

Program Settings