Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p14670 Brassica napus HOM05D013370 ORTHO05D016580 4.4e-95 351.3 176 100.0
BraA06t24403Z Brassica rapa HOM05D013370 ORTHO05D016580 6.7e-88 327.4 177 95.5
A06p12400 Brassica napus HOM05D013370 ORTHO05D016580 2.0e-87 325.9 177 94.9
BcaC05g25568 Brassica carinata HOM05D013370 ORTHO05D016580 1.2e-68 263.5 133 97.7
BolC5t30188H Brassica oleracea HOM05D013370 ORTHO05D016580 1.3e-46 190.3 94 100.0
BcaB02g06632 Brassica carinata HOM05D013370 ORTHO05D016580 1.5e-34 150.2 97 80.4
C05p14660 Brassica napus HOM05D013370 ORTHO05D016580 7.3e-34 147.9 113 69.9
BolC5t30187H Brassica oleracea HOM05D013370 ORTHO05D016580 7.3e-34 147.9 113 69.9
AL1G30600 Arabidopsis lyrata HOM05D013370 ORTHO05D016580 6.9e-24 114.8 157 44.6
BcaC05g25570 Brassica carinata HOM05D013370 ORTHO05D016580 1.9e-21 106.7 78 69.2
AL1G30590 Arabidopsis lyrata HOM05D014411 ORTHO05D015382 2.1e-17 93.2 129 43.4
CARHR018730 Cardamine hirsuta HOM05D013370 ORTHO05D015382 3.8e-14 82.4 132 40.2
Thhalv10008923m.g Eutrema salsugineum HOM05D003879 ORTHO05D003858 1.5e-10 70.5 175 34.3
arahy.Tifrunner.gnm1.ann1.WFL4FE Arachis hypogaea HOM05D003879 ORTHO05D003858 4.8e-09 65.5 120 34.2
Sp1g12410 Schrenkiella parvula HOM05D003879 ORTHO05D003858 6.2e-09 65.1 91 42.9
BcaC07g38860 Brassica carinata HOM05D014411 ORTHO05D015382 8.1e-09 64.7 101 35.6
C08p18000 Brassica napus HOM05D014411 ORTHO05D015382 8.1e-09 64.7 101 35.6
BolC8t49431H Brassica oleracea HOM05D014411 ORTHO05D015382 8.1e-09 64.7 101 35.6
THA.LOC104805175 Tarenaya hassleriana HOM05D003879 ORTHO05D003858 1.4e-08 63.9 88 44.3
BcaB03g13115 Brassica carinata HOM05D003879 ORTHO05D003858 1.8e-08 63.5 93 43.0
CARHR014450 Cardamine hirsuta HOM05D003879 ORTHO05D003858 2.4e-08 63.2 116 38.8
vmacro16344 Vaccinium macrocarpon HOM05D003879 ORTHO05D003858 6.9e-08 61.6 106 37.7
arahy.Tifrunner.gnm1.ann1.BSX7E4 Arachis hypogaea HOM05D003879 ORTHO05D003858 9.0e-08 61.2 88 37.5
A08p32120 Brassica napus HOM05D003879 ORTHO05D003858 9.0e-08 61.2 112 34.8
BraA08t35135Z Brassica rapa HOM05D003879 ORTHO05D003858 9.0e-08 61.2 112 34.8
PGR119G2196 Punica granatum HOM05D003879 ORTHO05D003858 9.0e-08 61.2 87 39.1
TAR622G1013 Trochodendron aralioides HOM05D003879 ORTHO05D003858 9.0e-08 61.2 108 35.2
CiPaw.06G087900 Carya illinoinensis HOM05D003879 ORTHO05D003858 1.2e-07 60.8 91 39.6
THA.LOC104824074 Tarenaya hassleriana HOM05D003879 ORTHO05D003858 1.2e-07 60.8 67 47.8
arahy.Tifrunner.gnm1.ann1.8KK2IT Arachis hypogaea HOM05D003879 ORTHO05D003858 2.0e-07 60.1 120 32.5
C08p19630 Brassica napus HOM05D015260 ORTHO05D003858 2.0e-07 60.1 138 34.8
Carub.0001s1375 Capsella rubella HOM05D003879 ORTHO05D003858 2.0e-07 60.1 64 48.4
Aqoxy4G02841 Aquilegia oxysepala HOM05D003879 ORTHO05D003858 2.6e-07 59.7 102 40.2
MSTRG.2335 Avicennia marina HOM05D003879 ORTHO05D003858 2.6e-07 59.7 79 40.5
Cpa.g.sc171.23 Carica papaya HOM05D003879 ORTHO05D003858 2.6e-07 59.7 149 30.9
Haze_11967 Corylus avellana HOM05D000508 ORTHO05D000371 2.6e-07 59.7 88 39.8
PSO017G6566 Papaver somniferum HOM05D003879 ORTHO05D003858 2.6e-07 59.7 63 49.2
Rhsim12G0132500 Rhododendron simsii HOM05D003879 ORTHO05D003858 2.6e-07 59.7 74 44.6
BcaC07g38717 Brassica carinata HOM05D003879 ORTHO05D003858 3.4e-07 59.3 91 41.8
C08p16470 Brassica napus HOM05D003879 ORTHO05D003858 3.4e-07 59.3 91 41.8
AL1G25920 Arabidopsis lyrata HOM05D003879 ORTHO05D003858 4.5e-07 58.9 85 41.2
Gohir.D11G305800 Gossypium hirsutum HOM05D003879 ORTHO05D003858 4.5e-07 58.9 111 35.1
Nn5g27527 Nelumbo nucifera HOM05D003879 ORTHO05D003858 4.5e-07 58.9 88 39.8
Aa31LG1G980 Aethionema arabicum HOM05D003879 ORTHO05D003858 5.8e-07 58.5 66 45.5
Cfa008939 Carpinus fangiana HOM05D003879 ORTHO05D003858 5.8e-07 58.5 67 46.3
MELO3C012121.2 Cucumis melo HOM05D003879 ORTHO05D003858 5.8e-07 58.5 75 44.0
Gorai.007G326500 Gossypium raimondii HOM05D003879 ORTHO05D003858 5.8e-07 58.5 87 40.2
Lj4g0017661 Lotus japonicus HOM05D003879 ORTHO05D003858 5.8e-07 58.5 74 43.2
Nn3g17308 Nelumbo nucifera HOM05D003879 ORTHO05D003858 5.8e-07 58.5 79 46.8
PSO478G4561 Papaver somniferum HOM05D003879 ORTHO05D003858 5.8e-07 58.5 63 47.6
Sed0022737 Sechium edule HOM05D003879 ORTHO05D003858 5.8e-07 58.5 74 43.2
TWI73G0721 Tripterygium wilfordii HOM05D003879 ORTHO05D003858 7.6e-07 58.2 67 46.3
TAR374G1047 Trochodendron aralioides HOM05D003879 ORTHO05D003858 7.6e-07 58.2 79 41.8
BolC8t49272H Brassica oleracea HOM05D003879 ORTHO05D003858 9.9e-07 57.8 66 45.5
CiPaw.07G072500 Carya illinoinensis HOM05D003879 ORTHO05D003858 9.9e-07 57.8 91 39.6
CDE04G3169 Ceratophyllum demersum HOM05D000406 ORTHO05D007930 9.9e-07 57.8 79 40.5
Gohir.A11G287541 Gossypium hirsutum HOM05D003879 ORTHO05D003858 9.9e-07 57.8 82 42.7
Lalb_Chr16g0385721 Lupinus albus HOM05D003879 ORTHO05D003858 9.9e-07 57.8 74 43.2
Manes.08G154000 Manihot esculenta HOM05D003879 ORTHO05D003858 9.9e-07 57.8 74 43.2
EL10Ac6g13251 Beta vulgaris HOM05D003879 ORTHO05D003858 1.3e-06 57.4 95 36.8
A08p32250 Brassica napus HOM05D015260 ORTHO05D003858 1.3e-06 57.4 109 36.7
BraA08t35148Z Brassica rapa HOM05D015260 ORTHO05D003858 1.3e-06 57.4 109 36.7
Migut.L01257 Erythranthe guttata HOM05D003879 ORTHO05D003858 1.3e-06 57.4 74 41.9
Potri.013G099100 Populus trichocarpa HOM05D003879 ORTHO05D003858 1.3e-06 57.4 77 44.2
Prupe.1G004000 Prunus persica HOM05D003879 ORTHO05D003858 1.3e-06 57.4 67 44.8
Thecc.02G340900 Theobroma cacao HOM05D003879 ORTHO05D003858 1.3e-06 57.4 74 41.9
ClCG05G024040 Citrullus lanatus HOM05D003879 ORTHO05D003858 1.7e-06 57.0 112 35.7
CsaV3_5G033000 Cucumis sativus L. HOM05D003879 ORTHO05D003858 1.7e-06 57.0 74 43.2
Duzib251G0512 Durio zibethinus HOM05D003879 ORTHO05D003858 1.7e-06 57.0 74 41.9
Atru.chr11.1737 Acer truncatum HOM05D003879 ORTHO05D003858 2.2e-06 56.6 74 40.5
AT1G14060 Arabidopsis thaliana HOM05D003879 ORTHO05D003858 2.2e-06 56.6 155 31.6
CARHR011770 Cardamine hirsuta HOM05D014411 ORTHO05D015382 2.2e-06 56.6 168 28.0
Dinv34127 Davidia involucrata HOM05D003879 ORTHO05D003858 2.2e-06 56.6 94 37.2
Gohir.D11G305600 Gossypium hirsutum HOM05D003879 ORTHO05D003858 2.2e-06 56.6 74 44.6
MD04G1004200 Malus domestica HOM05D003879 ORTHO05D003858 2.2e-06 56.6 67 46.3
Potri.013G109100 Populus trichocarpa HOM05D003879 ORTHO05D003858 2.2e-06 56.6 71 42.3
arahy.Tifrunner.gnm1.ann1.1F58IB Arachis hypogaea HOM05D003879 ORTHO05D003858 2.9e-06 56.2 121 33.1
BcaB08g34365 Brassica carinata HOM05D003879 ORTHO05D003858 2.9e-06 56.2 87 37.9
C08p16700 Brassica napus HOM05D015260 ORTHO05D003858 2.9e-06 56.2 129 35.7
CARHR014440 Cardamine hirsuta HOM05D003879 ORTHO05D003858 2.9e-06 56.2 70 40.0
Ca_08720_v3 Cicer arietinum L. HOM05D003879 ORTHO05D003858 2.9e-06 56.2 84 40.5
Ciclev10033434m.g Citrus clementina HOM05D003879 ORTHO05D003858 2.9e-06 56.2 79 40.5
Potri.019G081400 Populus trichocarpa HOM05D003879 ORTHO05D003858 2.9e-06 56.2 67 44.8
Ca_08721_v3 Cicer arietinum L. HOM05D003879 ORTHO05D003858 3.8e-06 55.8 100 38.0
Dinv16679 Davidia involucrata HOM05D003879 ORTHO05D003858 3.8e-06 55.8 105 36.2
Sabra13G0083700 Salix brachista HOM05D003879 ORTHO05D003858 3.8e-06 55.8 97 37.1
Sabra13G0085000 Salix brachista HOM05D003879 ORTHO05D003858 3.8e-06 55.8 97 37.1
TWI60G0224 Tripterygium wilfordii HOM05D003879 ORTHO05D003858 3.8e-06 55.8 77 42.9
FAN01G2110 Fragaria x ananassa HOM05D003879 ORTHO05D003858 4.9e-06 55.5 79 43.0
Glyma.20G032800 Glycine max HOM05D003879 ORTHO05D003858 4.9e-06 55.5 86 36.0
Ah.02g129450 Amaranthus hybridus HOM05D003879 ORTHO05D003858 6.4e-06 55.1 66 45.5
Ah.03g134780 Amaranthus hybridus HOM05D003879 ORTHO05D003858 6.4e-06 55.1 66 45.5
Carub.0004s2200 Capsella rubella HOM05D003879 ORTHO05D003858 6.4e-06 55.1 71 33.8
DCAR_014653 Daucus carota HOM05D003879 ORTHO05D003858 6.4e-06 55.1 81 39.5
Eucgr.B03201 Eucalyptus grandis HOM05D003879 ORTHO05D003858 6.4e-06 55.1 66 43.9
Phvul.002G169800 Phaseolus vulgaris HOM05D003879 ORTHO05D003858 6.4e-06 55.1 76 40.8
TPR.G34072 Trifolium pratense HOM05D003879 ORTHO05D003858 6.4e-06 55.1 113 34.5
CSS0010298 Camellia sinensis var. sinensis HOM05D003879 ORTHO05D003858 8.4e-06 54.7 67 44.8
FvH4_7g07760 Fragaria vesca HOM05D003879 ORTHO05D003858 8.4e-06 54.7 67 47.8
FAN06G4142 Fragaria x ananassa HOM05D003879 ORTHO05D003858 8.4e-06 54.7 67 47.8
Hma1.2p1_1079F.1_g254860 Hydrangea macrophylla HOM05D003879 ORTHO05D003858 8.4e-06 54.7 104 33.7
MBI07_g22385_MAGBIO Magnolia biondii HOM05D003879 ORTHO05D003858 8.4e-06 54.7 140 32.1
Sabra19G0093000 Salix brachista HOM05D003879 ORTHO05D003858 8.4e-06 54.7 103 37.9
Sp1g12000 Schrenkiella parvula HOM05D011464 ORTHO05D003858 8.4e-06 54.7 68 42.6
Sc04g0007930 Simmondsia chinensis HOM05D003879 ORTHO05D003858 8.4e-06 54.7 90 37.8
Thecc.07G109400 Theobroma cacao HOM05D003879 ORTHO05D003858 8.4e-06 54.7 97 37.1
Zm00001eb300270 Zea mays HOM05D003879 ORTHO05D003858 8.4e-06 54.7 69 40.6


User provided reference genes

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