Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 3.0e-47 191.4 93 100.0
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 4.4e-46 187.6 93 98.9
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 3.7e-45 184.5 93 97.8
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.5e-41 171.8 93 90.3
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 9.5e-41 169.9 93 89.2
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 2.1e-40 168.7 94 89.4
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 2.1e-40 168.7 94 89.4
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.8e-40 168.3 93 89.2
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 1.4e-39 166.0 93 86.0
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 1.8e-39 165.6 94 89.4
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 9.8e-38 159.8 94 85.1
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 9.8e-38 159.8 94 85.1
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.3e-37 159.5 93 83.9
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 1.9e-36 155.6 94 86.2
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 1.9e-36 155.6 94 86.2
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.9e-36 155.6 94 86.2
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 4.1e-36 154.5 93 81.7
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 7.0e-36 153.7 94 83.0
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 7.0e-36 153.7 94 83.0
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 7.0e-36 153.7 94 83.0
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 1.2e-35 152.9 94 78.7
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.0e-35 152.1 94 77.7
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 3.5e-35 151.4 94 84.0
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 3.5e-35 151.4 94 84.0
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 6.0e-35 150.6 94 84.0
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 6.0e-35 150.6 94 76.6
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.3e-34 149.4 94 77.7
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.3e-34 148.7 94 75.5
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 2.3e-34 148.7 77 93.5
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 3.0e-34 148.3 77 92.2
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 3.0e-34 148.3 77 92.2
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 4.3e-33 144.4 93 77.4
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 2.8e-32 141.7 77 88.3
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 2.8e-32 141.7 77 88.3
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 8.1e-32 140.2 77 88.3
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 1.1e-31 139.8 77 87.0
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 4.0e-31 137.9 94 72.3
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 8.9e-31 136.7 95 74.7
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 8.9e-31 136.7 95 74.7
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 1.2e-30 136.3 95 73.7
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 4.4e-30 134.4 95 72.6
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 4.4e-30 134.4 95 72.6
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.2e-29 132.1 84 70.2
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 1.6e-27 125.9 94 67.0
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 1.1e-23 113.2 96 62.5
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 4.0e-23 111.3 92 63.0
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 2.6e-22 108.6 96 61.5
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 2.6e-22 108.6 96 58.3
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 4.4e-22 107.8 95 60.0
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 7.6e-22 107.1 96 57.3
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 9.9e-22 106.7 96 58.3
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 1.3e-21 106.3 96 57.3
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.3e-21 106.3 96 57.3
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 1.3e-21 106.3 103 58.3
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.3e-21 106.3 96 61.5
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.3e-21 106.3 96 60.4
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.3e-21 106.3 96 60.4
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.3e-21 106.3 96 61.5
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.7e-21 105.9 96 61.5
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.7e-21 105.9 96 61.5
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 4.9e-21 104.4 96 56.2
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 4.9e-21 104.4 103 57.3
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 6.4e-21 104.0 96 58.3
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 8.4e-21 103.6 96 59.4
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.1e-20 103.2 95 60.0
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.1e-20 103.2 96 59.4
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 1.9e-20 102.4 103 56.3
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.9e-20 102.4 107 56.1
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.4e-20 102.1 102 57.8
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 4.1e-20 101.3 95 57.9
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 5.4e-20 100.9 108 53.7
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 9.2e-20 100.1 105 56.2
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.2e-19 99.8 106 55.7
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 1.2e-19 99.8 96 58.3
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 1.2e-19 99.8 106 55.7
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.2e-19 99.8 93 59.1
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 1.6e-19 99.4 95 56.8
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 1.6e-19 99.4 96 58.3
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 1.6e-19 99.4 103 57.3
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 2.1e-19 99.0 106 52.8
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 2.1e-19 99.0 93 55.9
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 2.7e-19 98.6 91 57.1
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 3.5e-19 98.2 96 54.2
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 3.5e-19 98.2 106 53.8
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 4.6e-19 97.8 105 55.2
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 4.6e-19 97.8 103 55.3
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 4.6e-19 97.8 106 54.7
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 6.0e-19 97.4 103 57.3
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 6.0e-19 97.4 96 55.2
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 7.8e-19 97.1 103 55.3
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 7.8e-19 97.1 96 55.2
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.8e-19 97.1 96 55.2
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 1.0e-18 96.7 94 57.4
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.0e-18 96.7 96 56.2
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 54.2
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 54.2
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.3e-18 96.3 96 54.2
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 1.7e-18 95.9 103 55.3
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 1.7e-18 95.9 96 56.2
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 1.7e-18 95.9 96 54.2
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 1.7e-18 95.9 105 54.3
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 3.9e-18 94.7 108 50.9
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 5.1e-18 94.4 96 54.2
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 5.1e-18 94.4 106 54.7
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 6.6e-18 94.0 96 54.2
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 6.6e-18 94.0 96 54.2
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 6.6e-18 94.0 106 53.8
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 6.6e-18 94.0 105 51.4
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 6.6e-18 94.0 104 53.8
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 8.6e-18 93.6 100 56.0
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 8.6e-18 93.6 96 54.2
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 1.1e-17 93.2 96 54.2
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 1.1e-17 93.2 93 53.8
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 1.5e-17 92.8 102 52.0
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 2.5e-17 92.0 102 52.0
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 3.3e-17 91.7 96 53.1
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 5.6e-17 90.9 100 55.0
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 5.6e-17 90.9 106 50.9
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 5.6e-17 90.9 103 53.4
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 5.6e-17 90.9 96 53.1
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 7.3e-17 90.5 104 50.0
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 9.6e-17 90.1 81 58.0
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 1.2e-16 89.7 100 51.0
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 1.6e-16 89.4 95 53.7
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 2.1e-16 89.0 96 52.1
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 2.1e-16 89.0 96 52.1
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 2.1e-16 89.0 106 52.8
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 2.8e-16 88.6 79 60.8
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.8e-16 88.6 106 51.9
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 2.8e-16 88.6 105 48.6
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 6.2e-16 87.4 77 59.7
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 6.2e-16 87.4 105 49.5
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 8.1e-16 87.0 96 52.1
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 1.1e-15 86.7 96 54.2
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.4e-15 86.3 107 50.5
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 1.4e-15 86.3 96 53.1
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.8e-15 85.9 105 52.4
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 1.8e-15 85.9 81 54.3
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.4e-15 85.5 94 47.9
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 2.4e-15 85.5 95 51.6
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 3.1e-15 85.1 94 51.1
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 5.2e-15 84.3 102 50.0
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 5.2e-15 84.3 84 56.0
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 5.2e-15 84.3 93 54.8
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 6.8e-15 84.0 107 49.5
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 6.8e-15 84.0 94 47.9
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 1.2e-14 83.2 103 49.5
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 1.2e-14 83.2 96 46.9
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.5e-14 82.8 97 53.6
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.5e-14 82.8 94 46.8
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 3.4e-14 81.6 94 48.9
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 5.8e-14 80.9 106 46.2
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 7.6e-14 80.5 72 59.7
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 1.3e-13 79.7 94 48.9
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 1.3e-13 79.7 99 47.5
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 1.3e-13 79.7 93 52.7
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.2e-13 79.0 73 56.2
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 2.9e-13 78.6 96 45.8
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 2.9e-13 78.6 93 46.2
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 4.9e-13 77.8 69 59.4
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 8.4e-13 77.0 98 51.0
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.1e-12 76.6 79 49.4
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.9e-12 75.9 78 56.4
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 1.9e-12 75.9 100 47.0
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 2.4e-12 75.5 104 48.1
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 4.2e-12 74.7 95 47.4
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 5.4e-12 74.3 93 48.4
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 1.2e-11 73.2 98 44.9
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 1.2e-11 73.2 92 50.0
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 2.1e-11 72.4 104 47.1
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 2.1e-11 72.4 101 43.6
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 2.7e-11 72.0 99 49.5
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 3.5e-11 71.6 94 46.8
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 6.0e-11 70.9 61 59.0
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.3e-10 69.7 75 49.3
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 3.0e-10 68.6 84 46.4
BraA07t30345Z Brassica rapa HOM05D003613 ORTHO05D004055 4.3e-09 64.7 39 74.4
C06p29730 Brassica napus HOM05D003613 ORTHO05D004055 5.6e-09 64.3 37 78.4
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 2.8e-08 62.0 80 41.2
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 6.9e-07 57.4 60 51.7
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 2.6e-06 55.5 77 46.8
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 5.8e-06 54.3 84 42.9
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 9.9e-06 53.5 71 46.5


User provided reference genes

Program Settings