Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p12770 Brassica napus HOM05D000619 ORTHO05D023641 5.6e-68 260.8 128 100.0
BolC5t30020H Brassica oleracea HOM05D000619 ORTHO05D023641 4.9e-56 221.1 124 88.7
BraA06t24262Z Brassica rapa HOM05D000619 ORTHO05D007729 5.5e-39 164.5 124 68.5
BcaC05g25397 Brassica carinata HOM05D000619 ORTHO05D007729 1.6e-38 162.9 124 67.7
C05p12730 Brassica napus HOM05D000619 ORTHO05D007729 1.6e-38 162.9 124 67.7
BolC5t30017H Brassica oleracea HOM05D000619 ORTHO05D007729 1.6e-38 162.9 124 67.7
A06p10840 Brassica napus HOM05D000619 ORTHO05D007729 7.9e-38 160.6 124 66.9
BcaB02g06548 Brassica carinata HOM05D000619 ORTHO05D007729 8.8e-37 157.1 126 68.3
Sp1g13220 Schrenkiella parvula HOM05D000619 ORTHO05D007729 7.4e-36 154.1 125 66.4
A09p61800 Brassica napus HOM05D000619 ORTHO05D007729 1.7e-35 152.9 125 65.6
BraA09t41548Z Brassica rapa HOM05D000619 ORTHO05D007729 1.7e-35 152.9 125 65.6
Thhalv10007298m.g Eutrema salsugineum HOM05D000619 ORTHO05D007729 1.7e-35 152.9 125 66.4
C08p45420 Brassica napus HOM05D000619 ORTHO05D007729 1.1e-34 150.2 125 65.6
BolC8t52096H Brassica oleracea HOM05D000619 ORTHO05D007729 1.1e-34 150.2 125 65.6
BcaC07g41539 Brassica carinata HOM05D000619 ORTHO05D007729 3.1e-34 148.7 125 64.8
BcaB08g34409 Brassica carinata HOM05D000619 ORTHO05D007729 5.3e-34 147.9 124 62.1
AL1G26810 Arabidopsis lyrata HOM05D000619 ORTHO05D007729 2.7e-30 135.6 120 60.0
Aa31LG1G310 Aethionema arabicum HOM05D000619 ORTHO05D007729 1.8e-29 132.9 96 69.8
AT1G14780 Arabidopsis thaliana HOM05D000619 ORTHO05D007729 2.3e-29 132.5 120 58.3
CARHR015320 Cardamine hirsuta HOM05D000619 ORTHO05D007729 2.3e-29 132.5 119 59.7
Carub.0001s1458 Capsella rubella HOM05D000619 ORTHO05D007729 3.0e-29 132.1 120 59.2
AL7G45380 Arabidopsis lyrata HOM05D000619 ORTHO05D023641 9.1e-26 120.6 83 71.1
THA.LOC104824576 Tarenaya hassleriana HOM05D000619 ORTHO05D007729 2.5e-23 112.5 86 66.3
Dinv26360 Davidia involucrata HOM05D000619 ORTHO05D007729 5.0e-16 88.2 86 54.7
CiPaw.05G185200 Carya illinoinensis HOM05D000619 ORTHO05D007729 2.7e-14 82.4 82 53.7
TWI74G0413 Tripterygium wilfordii HOM05D000619 ORTHO05D007729 8.0e-14 80.9 82 52.4
Potri.008G136401 Populus trichocarpa HOM05D000619 ORTHO05D007729 1.0e-13 80.5 86 50.0
Phvul.002G322500 Phaseolus vulgaris HOM05D000619 ORTHO05D007729 1.4e-13 80.1 88 48.9
Actinidia34044 Actinidia chinensis HOM05D000619 ORTHO05D007729 1.8e-13 79.7 86 45.3
ClCG01G006630 Citrullus lanatus HOM05D000619 ORTHO05D007729 3.0e-13 79.0 87 49.4
Glyma.08G047300 Glycine max HOM05D000619 ORTHO05D007729 3.0e-13 79.0 88 48.9
Gorai.005G152300 Gossypium raimondii HOM05D000619 ORTHO05D007729 3.0e-13 79.0 89 47.2
Sabra10G0077200 Salix brachista HOM05D000619 ORTHO05D007729 3.0e-13 79.0 86 48.8
Atru.chr11.878 Acer truncatum HOM05D000619 ORTHO05D007729 4.0e-13 78.6 86 48.8
Hma1.2p1_2041F.1_g312200 Hydrangea macrophylla HOM05D000619 ORTHO05D007729 4.0e-13 78.6 86 51.2
Psat7g007160 Pisum sativum HOM05D000619 ORTHO05D007729 4.0e-13 78.6 81 50.6
Potri.010G104600 Populus trichocarpa HOM05D000619 ORTHO05D007729 4.0e-13 78.6 86 48.8
Haze_10856 Corylus avellana HOM05D000619 ORTHO05D007729 5.2e-13 78.2 86 46.5
Glyma.05G240200 Glycine max HOM05D000619 ORTHO05D007729 5.2e-13 78.2 88 47.7
Gohir.D02G136300 Gossypium hirsutum HOM05D000619 ORTHO05D007729 5.2e-13 78.2 89 46.1
Hma1.2p1_0234F.1_g098480 Hydrangea macrophylla HOM05D000619 ORTHO05D007729 5.2e-13 78.2 86 51.2
Gohir.A03G111700 Gossypium hirsutum HOM05D000619 ORTHO05D007729 8.8e-13 77.4 89 46.1
Oeu044000.1 Olea europaea HOM05D000619 ORTHO05D007729 8.8e-13 77.4 87 47.1
COL.COLO4_27628 Corchorus olitorius HOM05D000619 ORTHO05D007729 1.2e-12 77.0 87 49.4
Cfa015043 Carpinus fangiana HOM05D000619 ORTHO05D007729 1.5e-12 76.6 86 44.2
Duzib268G0705 Durio zibethinus HOM05D000619 ORTHO05D007729 1.5e-12 76.6 86 47.7
Prupe.1G334800 Prunus persica HOM05D000619 ORTHO05D007729 1.5e-12 76.6 108 39.8
QL03p037162 Quercus lobata HOM05D000619 ORTHO05D007729 1.5e-12 76.6 97 44.3
QL03p037519 Quercus lobata HOM05D000619 ORTHO05D007729 1.5e-12 76.6 97 44.3
Thecc.02G308800 Theobroma cacao HOM05D000619 ORTHO05D007729 1.5e-12 76.6 86 47.7
GSVIVG01011635001 Vitis vinifera HOM05D000619 ORTHO05D007729 1.5e-12 76.6 89 43.8
Ciclev10014601m.g Citrus clementina HOM05D000619 ORTHO05D007729 2.6e-12 75.9 86 45.3
Lalb_Chr05g0222111 Lupinus albus HOM05D000619 ORTHO05D007729 4.4e-12 75.1 87 49.4
Dinv06128 Davidia involucrata HOM05D000619 ORTHO05D007729 5.7e-12 74.7 86 48.8
ATR0118G031 Amborella trichopoda HOM05D000619 ORTHO05D007729 7.5e-12 74.3 81 49.4
MELO3C005258.2 Cucumis melo HOM05D000619 ORTHO05D007729 7.5e-12 74.3 94 47.9
Lsat_1_v5_gn_8_35241 Lactuca sativa HOM05D000619 ORTHO05D007729 7.5e-12 74.3 87 46.0
Lalb_Chr16g0387471 Lupinus albus HOM05D000619 ORTHO05D007729 7.5e-12 74.3 81 51.9
CsaV3_5G027960 Cucumis sativus L. HOM05D000619 ORTHO05D007729 1.3e-11 73.6 89 47.2
Lj3C863G4 Lonicera japonica HOM05D000619 ORTHO05D007729 1.3e-11 73.6 89 42.7
MD13G1019100 Malus domestica HOM05D000619 ORTHO05D007729 1.3e-11 73.6 89 41.6
Gohir.A13G027400 Gossypium hirsutum HOM05D000619 ORTHO05D007729 2.2e-11 72.8 87 47.1
Manes.17G085300 Manihot esculenta HOM05D000619 ORTHO05D007729 2.2e-11 72.8 87 46.0
Cpa.g.sc2.172 Carica papaya HOM05D000619 ORTHO05D007729 2.8e-11 72.4 97 42.3
Sabra08G0104200 Salix brachista HOM05D000619 ORTHO05D007729 2.8e-11 72.4 86 44.2
Nn4g24444 Nelumbo nucifera HOM05D000619 ORTHO05D007729 3.7e-11 72.0 86 45.3
Gohir.D13G026200 Gossypium hirsutum HOM05D000619 ORTHO05D007729 4.8e-11 71.6 87 46.0
Ca_17269_v3 Cicer arietinum L. HOM05D000619 ORTHO05D007729 6.3e-11 71.2 88 40.9
TAR629G2323 Trochodendron aralioides HOM05D000619 ORTHO05D007729 6.3e-11 71.2 89 43.8
DCAR_002674 Daucus carota HOM05D000619 ORTHO05D007729 8.3e-11 70.9 82 43.9
Gorai.013G029400 Gossypium raimondii HOM05D000619 ORTHO05D007729 8.3e-11 70.9 87 46.0
VMungo0251G1088 Vigna mungo HOM05D000619 ORTHO05D007729 8.3e-11 70.9 88 44.3
arahy.Tifrunner.gnm1.ann1.0U64IK Arachis hypogaea HOM05D000619 ORTHO05D007729 1.1e-10 70.5 90 45.6
arahy.Tifrunner.gnm1.ann1.NE9ZZ9 Arachis hypogaea HOM05D000619 ORTHO05D007729 1.1e-10 70.5 90 45.6
HanXRQChr08g0224251 Helianthus annuus HOM05D000619 ORTHO05D007729 1.1e-10 70.5 82 43.9
Manes.15G136000 Manihot esculenta HOM05D000619 ORTHO05D007729 1.1e-10 70.5 83 48.2
Solyc01g005220.3 Solanum lycopersicum HOM05D000619 ORTHO05D007729 1.1e-10 70.5 84 45.2
FvH4_4g33390 Fragaria vesca HOM05D000619 ORTHO05D007729 1.4e-10 70.1 87 41.4
FAN12G2541 Fragaria x ananassa HOM05D000619 ORTHO05D007729 1.4e-10 70.1 87 41.4
FAN17G1689 Fragaria x ananassa HOM05D000619 ORTHO05D007729 1.4e-10 70.1 87 41.4
FAN22G1766 Fragaria x ananassa HOM05D000619 ORTHO05D007729 1.4e-10 70.1 87 41.4
CAN.G282.117 Capsicum annuum HOM05D000619 ORTHO05D007729 1.8e-10 69.7 81 45.7
FAN07G1267 Fragaria x ananassa HOM05D000619 ORTHO05D007729 1.8e-10 69.7 87 41.4
vmacro08574 Vaccinium macrocarpon HOM05D000619 ORTHO05D007729 1.8e-10 69.7 82 43.9
RcHm_v2.0_Chr4g0442651 Rosa chinensis HOM05D000619 ORTHO05D007729 2.4e-10 69.3 87 42.5
Nitab4.5_0001406g0020 Nicotiana tabacum HOM05D000619 ORTHO05D007729 4.1e-10 68.6 90 41.1
PGSC0003DMG400022779 Solanum tuberosum HOM05D000619 ORTHO05D007729 5.4e-10 68.2 84 44.0
Sed0016627 Sechium edule HOM05D000619 ORTHO05D007729 7.0e-10 67.8 131 40.5
Ah.03g135890 Amaranthus hybridus HOM05D000619 ORTHO05D007729 9.1e-10 67.4 88 44.3
Lj4g0017564 Lotus japonicus HOM05D000619 ORTHO05D007729 9.1e-10 67.4 102 40.2
PGR142G3439 Punica granatum HOM05D000619 ORTHO05D007729 9.1e-10 67.4 86 43.0
SGA_v2.0_scaffold23G10177 Striga asiatica HOM05D000619 ORTHO05D007729 9.1e-10 67.4 83 47.0
Cc11_g06700 Coffea canephora HOM05D000619 ORTHO05D007729 1.6e-09 66.6 86 43.0
ECA233G1592 Erigeron canadensis HOM05D000619 ORTHO05D007729 1.6e-09 66.6 82 43.9
AUR62005662 Chenopodium quinoa HOM05D000619 ORTHO05D007729 2.0e-09 66.2 83 44.6
Eucgr.G01611 Eucalyptus grandis HOM05D000619 ORTHO05D007729 4.5e-09 65.1 69 47.8
MBI19_g09390_MAGBIO Magnolia biondii HOM05D000619 ORTHO05D007729 4.5e-09 65.1 89 40.4
CANSAT78G0619 Cannabis sativa HOM05D000619 ORTHO05D007729 1.3e-08 63.5 78 43.6
Nitab4.5_0000538g0030 Nicotiana tabacum HOM05D000619 ORTHO05D007729 1.7e-08 63.2 85 38.8
AUR62028891 Chenopodium quinoa HOM05D000619 ORTHO05D007729 2.2e-08 62.8 83 43.4
Peaxi162Scf00275g00077 Petunia axillaris HOM05D000619 ORTHO05D007729 3.8e-08 62.0 82 41.5
Zm00001eb371490 Zea mays HOM05D000619 ORTHO05D007729 5.0e-08 61.6 85 41.2
EL10Ac6g13547 Beta vulgaris HOM05D000619 ORTHO05D007729 1.1e-07 60.5 67 43.3
Migut.E00493 Erythranthe guttata HOM05D000619 ORTHO05D007729 1.1e-07 60.5 85 42.4
Os06g0251100 Oryza sativa ssp. japonica HOM05D000619 ORTHO05D007729 1.9e-07 59.7 87 41.4
MBI13_g24907_MAGBIO Magnolia biondii HOM05D000619 ORTHO05D007729 2.5e-07 59.3 79 44.3
Hund25485 Selenicereus undatus HOM05D000619 ORTHO05D007729 2.5e-07 59.3 69 50.7
Sc04g0010360 Simmondsia chinensis HOM05D000619 ORTHO05D007729 3.2e-07 58.9 93 40.9
unitig_27.g25307 Utricularia gibba HOM05D000619 ORTHO05D007729 9.4e-07 57.4 89 41.6
SalBow2G0975 Salvia bowleyana HOM05D000619 ORTHO05D007729 1.6e-06 56.6 87 41.4
SEGI_00635 Sequoiadendron giganteum HOM05D000619 ORTHO05D008420 1.6e-06 56.6 81 37.0
SEGI_41429 Sequoiadendron giganteum HOM05D000619 ORTHO05D008420 3.6e-06 55.5 89 32.6
ECA248G2948 Erigeron canadensis HOM05D000619 ORTHO05D008420 8.0e-06 54.3 85 34.1


User provided reference genes

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