Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 1.6e-98 362.8 195 100.0
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 7.4e-96 354.0 196 98.0
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 1.2e-93 346.7 195 95.9
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 5.0e-92 341.3 195 94.4
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.2e-88 330.1 195 89.2
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 9.1e-86 320.5 199 85.4
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 1.3e-84 316.6 197 84.8
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 2.9e-84 315.5 198 90.4
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 5.0e-84 314.7 197 84.3
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 2.1e-82 309.3 196 83.2
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 3.0e-81 305.4 198 83.8
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 4.8e-79 298.1 198 82.3
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 1.3e-63 246.9 187 68.4
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 1.8e-62 243.0 137 87.6
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 2.4e-62 242.7 170 72.9
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.2e-62 242.3 160 76.9
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.1e-62 241.9 137 87.6
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 5.4e-62 241.5 198 64.1
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 9.2e-62 240.7 135 85.9
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 1.6e-61 240.0 173 71.1
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 2.0e-61 239.6 130 86.2
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 2.0e-61 239.6 198 65.7
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 2.7e-61 239.2 199 69.8
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 2.7e-61 239.2 128 89.1
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 3.5e-61 238.8 170 72.4
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 3.5e-61 238.8 128 90.6
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.5e-61 238.8 128 90.6
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 3.5e-61 238.8 130 85.4
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 4.6e-61 238.4 205 62.0
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 5.9e-61 238.0 137 82.5
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 7.8e-61 237.7 199 62.3
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 1.0e-60 237.3 135 83.7
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.7e-60 236.5 129 86.0
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 1.7e-60 236.5 188 67.6
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.7e-60 236.5 198 64.6
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 2.3e-60 236.1 138 80.4
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.3e-60 236.1 135 84.4
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.3e-60 236.1 135 84.4
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 2.3e-60 236.1 172 70.3
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 3.0e-60 235.7 138 81.9
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 3.0e-60 235.7 176 65.3
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 3.9e-60 235.3 136 82.4
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.9e-60 235.3 205 61.0
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 3.9e-60 235.3 128 86.7
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 5.0e-60 235.0 189 65.1
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 6.6e-60 234.6 129 85.3
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 1.5e-59 233.4 183 67.8
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 1.9e-59 233.0 129 84.5
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 7.3e-59 231.1 125 88.0
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 7.3e-59 231.1 129 83.7
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.2e-58 230.3 139 80.6
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 3.6e-58 228.8 130 81.5
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 6.2e-58 228.0 128 82.8
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.4e-57 226.9 143 78.3
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.4e-57 226.9 143 78.3
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 1.4e-57 226.9 200 62.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.4e-57 226.9 140 80.0
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.8e-57 226.5 167 68.3
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 3.1e-57 225.7 127 83.5
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 3.1e-57 225.7 121 89.3
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 3.1e-57 225.7 137 81.0
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 4.0e-57 225.3 182 63.2
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 4.0e-57 225.3 129 80.6
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 4.0e-57 225.3 129 80.6
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 5.2e-57 224.9 198 62.1
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 8.9e-57 224.2 175 65.1
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 8.9e-57 224.2 194 62.4
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 8.9e-57 224.2 137 79.6
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 1.2e-56 223.8 183 62.3
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 2.0e-56 223.0 143 76.9
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 2.0e-56 223.0 141 78.7
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 2.0e-56 223.0 133 79.7
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 3.4e-56 222.2 203 61.1
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 7.5e-56 221.1 189 61.9
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 7.5e-56 221.1 128 82.8
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 7.5e-56 221.1 140 76.4
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 1.7e-55 219.9 142 78.2
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 2.9e-55 219.2 194 58.8
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.7e-55 218.8 139 77.0
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 3.7e-55 218.8 129 82.2
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 1.4e-54 216.9 131 80.9
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 1.4e-54 216.9 197 61.9
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 1.9e-54 216.5 139 76.3
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 1.9e-54 216.5 200 62.5
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 1.9e-54 216.5 143 76.9
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 1.9e-54 216.5 143 76.9
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.9e-54 216.5 143 76.9
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.2e-53 213.8 182 67.0
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 3.5e-53 212.2 138 75.4
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 1.0e-52 210.7 204 60.8
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.3e-52 210.3 130 79.2
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 3.9e-52 208.8 131 76.3
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 5.0e-52 208.4 120 80.0
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 8.6e-52 207.6 209 54.5
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 8.1e-50 201.1 137 70.8
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 9.9e-48 194.1 120 78.3
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 4.9e-47 191.8 139 64.0
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 1.9e-46 189.9 172 59.3
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.9e-46 189.9 129 65.9
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 2.4e-46 189.5 113 77.9
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.2e-45 187.2 113 77.9
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.6e-45 186.8 129 65.1
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 5.1e-44 181.8 141 63.8
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.5e-43 180.3 111 74.8
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 1.2e-42 177.2 122 65.6
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 3.5e-37 159.1 126 55.6
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.7e-36 156.8 129 63.6
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 6.6e-36 154.8 140 58.6
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.3e-23 114.0 127 40.2
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 4.3e-19 99.0 112 42.0
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 4.0e-17 92.4 106 44.3
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 2.6e-16 89.7 54 74.1
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.1e-14 84.3 131 31.3


User provided reference genes

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