Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p10870 Brassica napus HOM05D000101 ORTHO05D000089 2.7e-86 322.0 167 100.0
BcaC05g25209 Brassica carinata HOM05D000101 ORTHO05D000089 6.4e-64 247.7 132 99.2
BolC5t29836H Brassica oleracea HOM05D000101 ORTHO05D000089 9.9e-57 223.8 256 55.5
C05p10930 Brassica napus HOM05D000101 ORTHO05D000089 1.1e-55 220.3 256 55.9
BcaB07g31809 Brassica carinata HOM05D000101 ORTHO05D000089 2.7e-54 215.7 255 54.9
BcaC05g25202 Brassica carinata HOM05D000137 ORTHO05D000089 3.4e-49 198.7 154 72.7
BolC5t29833H Brassica oleracea HOM05D000101 ORTHO05D000089 5.9e-41 171.4 88 98.9
Sp1g10910 Schrenkiella parvula HOM05D000101 ORTHO05D000089 2.9e-40 169.1 243 47.7
A09p63250 Brassica napus HOM05D000101 ORTHO05D027301 3.1e-26 122.5 128 55.5
BcaNung05799 Brassica carinata HOM05D000101 ORTHO05D000089 5.9e-25 118.2 129 54.3
A10p17490 Brassica napus HOM05D000101 ORTHO05D000089 4.7e-22 108.6 125 52.8
BraA10t43829Z Brassica rapa HOM05D000101 ORTHO05D000089 4.7e-22 108.6 125 52.8
BcaC04g19685 Brassica carinata HOM05D000101 ORTHO05D000089 2.2e-19 99.8 119 50.4
BcaC07g42581 Brassica carinata HOM05D000101 ORTHO05D000089 1.5e-12 77.0 137 38.0
BcaC07g41707 Brassica carinata HOM05D000101 ORTHO05D000089 4.4e-12 75.5 136 36.0
BraA09t41679Z Brassica rapa HOM05D000101 ORTHO05D000089 5.7e-12 75.1 139 35.3
AT4G10780 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 7.5e-12 74.7 143 35.7
Aa31LG1G2880 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.3e-11 73.9 136 36.0
AT1G12290 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.3e-11 73.9 126 41.3
BolC8t52286H Brassica oleracea HOM05D000101 ORTHO05D000089 1.3e-11 73.9 135 35.6
Thhalv10006784m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.3e-11 73.9 130 40.8
BcaC07g41710 Brassica carinata HOM05D000101 ORTHO05D000089 1.7e-11 73.6 136 34.6
CARHR012600 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.7e-11 73.6 130 42.3
A09p63940 Brassica napus HOM05D000101 ORTHO05D000089 2.8e-11 72.8 77 49.4
BolC8t52287H Brassica oleracea HOM05D000101 ORTHO05D000089 2.8e-11 72.8 74 52.7
BraA09t41740Z Brassica rapa HOM05D000101 ORTHO05D000089 2.8e-11 72.8 140 36.4
C08p46750 Brassica napus HOM05D000101 ORTHO05D000089 4.8e-11 72.0 72 51.4
A08p32950 Brassica napus HOM05D000101 ORTHO05D000089 6.3e-11 71.6 140 35.0
BraA08t35215Z Brassica rapa HOM05D000101 ORTHO05D000089 6.3e-11 71.6 140 35.0
A09p63930 Brassica napus HOM05D000101 ORTHO05D000089 8.2e-11 71.2 140 36.4
BolC5t29840H Brassica oleracea HOM05D000101 ORTHO05D000089 8.2e-11 71.2 119 40.3
CARHR255820 Cardamine hirsuta HOM05D000101 ORTHO05D000089 8.2e-11 71.2 137 36.5
Aa31LG1G2350 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.1e-10 70.9 76 53.9
C08p15270 Brassica napus HOM05D000101 ORTHO05D000089 1.1e-10 70.9 140 34.3
CARHR012520 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.1e-10 70.9 142 33.8
CARHR220850 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.4e-10 70.5 127 37.8
Aa31LG1G3680 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.8e-10 70.1 78 41.0
AT1G12220 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.8e-10 70.1 190 33.7
BraA06t24118Z Brassica rapa HOM05D000101 ORTHO05D000089 1.8e-10 70.1 122 37.7
Aa31LG8G10400 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.4e-10 69.7 135 36.3
Carub.0001s1196 Capsella rubella HOM05D000101 ORTHO05D000089 3.1e-10 69.3 127 39.4
Aa31LG1G3670 Aethionema arabicum HOM05D000101 ORTHO05D000089 5.3e-10 68.6 78 43.6
AT1G12280 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 5.3e-10 68.6 129 38.8
Aa31csc22G200 Aethionema arabicum HOM05D000101 ORTHO05D000089 7.0e-10 68.2 82 45.1
BcaC07g41708 Brassica carinata HOM05D000101 ORTHO05D000089 9.1e-10 67.8 144 34.0
BolC8t52215H Brassica oleracea HOM05D000101 ORTHO05D000089 1.2e-09 67.4 137 35.8
Aa31LG1G3700 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.6e-09 67.0 80 42.5
BcaB02g07270 Brassica carinata HOM05D000101 ORTHO05D000089 1.6e-09 67.0 109 42.2
BcaC07g42588 Brassica carinata HOM05D000101 ORTHO05D000089 1.6e-09 67.0 68 51.5
A09p63260 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-09 67.0 134 35.8
Aa31LG1G3570 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.0e-09 66.6 149 33.6
Aa31LG1G3690 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.0e-09 66.6 150 32.0
Aa31LG1G3710 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.0e-09 66.6 152 28.3
Aa31LG1G3730 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.0e-09 66.6 144 32.6
AL1G23630 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 2.0e-09 66.6 88 43.2
BcaC07g41711 Brassica carinata HOM05D000101 ORTHO05D000089 2.0e-09 66.6 124 36.3
BcaC07g42587 Brassica carinata HOM05D000101 ORTHO05D000089 2.0e-09 66.6 68 51.5
BolC8t52214H Brassica oleracea HOM05D000101 ORTHO05D000089 2.0e-09 66.6 134 35.8
BolC8t52288H Brassica oleracea HOM05D000101 ORTHO05D000089 2.0e-09 66.6 124 36.3
BraA09t41678Z Brassica rapa HOM05D000101 ORTHO05D000089 2.0e-09 66.6 134 35.8
AL4G23030 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 2.7e-09 66.2 136 33.1
BcaC05g24942 Brassica carinata HOM05D000101 ORTHO05D000089 3.5e-09 65.9 146 31.5
C08p47470 Brassica napus HOM05D000101 ORTHO05D000089 3.5e-09 65.9 124 36.3
Aa31LG1G2500 Aethionema arabicum HOM05D000101 ORTHO05D000089 4.5e-09 65.5 87 41.4
AL1G23590 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 4.5e-09 65.5 118 39.0
C08p47460 Brassica napus HOM05D000101 ORTHO05D000089 4.5e-09 65.5 74 50.0
Thhalv10002924m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 5.9e-09 65.1 105 42.9
Aa31LG1G2360 Aethionema arabicum HOM05D000101 ORTHO05D000089 7.7e-09 64.7 150 30.7
Aa31LG1G2890 Aethionema arabicum HOM05D000101 ORTHO05D000089 7.7e-09 64.7 78 47.4
BcaC05g24943 Brassica carinata HOM05D000101 ORTHO05D000089 1.0e-08 64.3 146 31.5
BolC6t35351H Brassica oleracea HOM05D000101 ORTHO05D000089 1.0e-08 64.3 127 37.8
BcaC08g42981 Brassica carinata HOM05D000101 ORTHO05D000089 1.3e-08 63.9 127 37.8
C06p02230 Brassica napus HOM05D000101 ORTHO05D000089 1.3e-08 63.9 127 37.8
AL1G23500 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.7e-08 63.5 148 35.1
BcaB03g13202 Brassica carinata HOM05D000101 ORTHO05D000089 1.7e-08 63.5 135 33.3
CARHR012590 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.7e-08 63.5 128 35.9
Sp1g10900 Schrenkiella parvula HOM05D000101 ORTHO05D000089 2.2e-08 63.2 124 37.1
AL1G23480 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 2.9e-08 62.8 148 31.1
BcaB03g13138 Brassica carinata HOM05D000101 ORTHO05D000089 2.9e-08 62.8 128 36.7
A06p09300 Brassica napus HOM05D000101 ORTHO05D000089 3.8e-08 62.4 122 33.6
C08p47550 Brassica napus HOM05D000101 ORTHO05D000089 3.8e-08 62.4 108 41.7
BraA06t24117Z Brassica rapa HOM05D000101 ORTHO05D000089 3.8e-08 62.4 124 33.1
A08p32910 Brassica napus HOM05D000101 ORTHO05D000089 5.0e-08 62.0 140 32.1
BraA10t42883Z Brassica rapa HOM05D000101 ORTHO05D000089 5.0e-08 62.0 125 39.2
Sp4g11155 Schrenkiella parvula HOM05D000101 ORTHO05D000089 6.5e-08 61.6 153 29.4
A07p23110 Brassica napus HOM05D000101 ORTHO05D000089 8.5e-08 61.2 106 40.6
BraA08t35213Z Brassica rapa HOM05D000101 ORTHO05D000089 8.5e-08 61.2 144 31.2
Aa31LG1G2390 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.1e-07 60.8 155 32.3
A10p06150 Brassica napus HOM05D000101 ORTHO05D000089 1.5e-07 60.5 127 37.8
Aa31LG1G2310 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.9e-07 60.1 144 31.9
AT1G12210 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.9e-07 60.1 148 33.1
CARHR220970 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.9e-07 60.1 143 30.8
Aa31LG1G2930 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.5e-07 59.7 100 39.0
A09p64040 Brassica napus HOM05D000101 ORTHO05D000089 2.5e-07 59.7 110 40.0
Aa31LG1G2330 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.2e-07 59.3 158 31.6
BraA09t39784Z Brassica rapa HOM05D000101 ORTHO05D000089 3.2e-07 59.3 194 27.8
CARHR051470 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.2e-07 59.3 117 38.5
CARHR220990 Cardamine hirsuta HOM05D000101 ORTHO05D000089 4.2e-07 58.9 156 30.1
Aa31LG1G3560 Aethionema arabicum HOM05D000101 ORTHO05D000089 5.5e-07 58.5 143 30.1
THA.LOC104813584 Tarenaya hassleriana HOM05D000101 ORTHO05D000089 5.5e-07 58.5 119 39.5
BraA09t39791Z Brassica rapa HOM05D000101 ORTHO05D000089 7.2e-07 58.2 130 32.3
Aa31LG1G2370 Aethionema arabicum HOM05D000101 ORTHO05D000089 9.4e-07 57.8 68 47.1
BcaB03g13168 Brassica carinata HOM05D000101 ORTHO05D000089 9.4e-07 57.8 149 31.5
Thhalv10027047m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 9.4e-07 57.8 52 55.8
THA.LOC104813585 Tarenaya hassleriana HOM05D000101 ORTHO05D000089 9.4e-07 57.8 119 37.0
BcaB01g00645 Brassica carinata HOM05D000101 ORTHO05D000089 1.2e-06 57.4 135 31.9
Carub.0001s1197 Capsella rubella HOM05D000101 ORTHO05D000089 1.2e-06 57.4 132 35.6
Thhalv10023256m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.2e-06 57.4 137 33.6
C08p25200 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-06 57.0 130 31.5
Aa31LG1G2920 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.1e-06 56.6 139 33.8
BcaB01g00640 Brassica carinata HOM05D000101 ORTHO05D000089 2.1e-06 56.6 130 30.0
BcaC07g39476 Brassica carinata HOM05D000101 ORTHO05D000089 2.1e-06 56.6 130 31.5
A02p31050 Brassica napus HOM05D000011 ORTHO05D000018 2.1e-06 56.6 151 29.1
BcaB03g13197 Brassica carinata HOM05D000101 ORTHO05D000089 2.7e-06 56.2 149 31.5
BcaB07g33473 Brassica carinata HOM05D000101 ORTHO05D000089 2.7e-06 56.2 120 33.3
A09p43150 Brassica napus HOM05D000101 ORTHO05D000089 2.7e-06 56.2 138 31.2
BolC8t50140H Brassica oleracea HOM05D000101 ORTHO05D000089 2.7e-06 56.2 130 30.8
Aa31LG1G2290 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.6e-06 55.8 82 41.5
Aa31LG1G2480 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.6e-06 55.8 141 29.1
Thhalv10006759m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 3.6e-06 55.8 135 34.8
BcaC05g25198 Brassica carinata HOM05D000101 ORTHO05D000089 6.1e-06 55.1 80 40.0
C05p10970 Brassica napus HOM05D000101 ORTHO05D000089 6.1e-06 55.1 80 40.0
BolC5t29838H Brassica oleracea HOM05D000101 ORTHO05D000089 6.1e-06 55.1 80 40.0
BcaB02g09716 Brassica carinata HOM05D000101 ORTHO05D000089 8.0e-06 54.7 186 26.9
BcaB07g31810 Brassica carinata HOM05D000101 ORTHO05D000089 8.0e-06 54.7 84 42.9
C09p01440 Brassica napus HOM05D000101 ORTHO05D000089 8.0e-06 54.7 142 35.2
Thhalv10023266m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 8.0e-06 54.7 53 49.1


User provided reference genes

Program Settings