Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 8.7e-207 723.4 364 100.0
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 7.4e-206 720.3 364 99.5
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.0e-194 683.3 364 95.1
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.0e-194 683.3 364 95.1
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.9e-190 669.1 364 91.5
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.1e-188 663.3 366 91.0
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 6.7e-183 644.0 368 89.1
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 5.7e-182 641.0 368 88.3
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 3.7e-181 638.3 369 88.6
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 1.5e-179 632.9 364 88.7
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 2.6e-179 632.1 368 87.2
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 4.4e-174 614.8 367 83.1
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.4e-156 556.6 363 75.8
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.8e-143 513.1 304 78.9
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 1.8e-143 513.1 317 77.3
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 4.4e-142 508.4 362 70.7
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 2.9e-141 505.8 365 67.9
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.7e-141 505.4 311 76.2
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 4.9e-141 505.0 372 68.0
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 8.3e-141 504.2 296 79.1
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 1.1e-140 503.8 300 78.7
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 1.1e-140 503.8 366 68.0
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 1.1e-140 503.8 363 68.9
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.9e-140 503.1 359 69.9
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 3.2e-140 502.3 296 80.1
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 5.4e-140 501.5 373 67.0
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 9.2e-140 500.7 313 74.8
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 9.2e-140 500.7 292 80.5
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 1.2e-139 500.4 291 80.1
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.0e-139 499.6 313 74.4
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.3e-138 496.9 314 73.6
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.3e-138 496.9 360 68.3
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-138 496.5 370 68.1
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.7e-138 496.5 314 73.6
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 2.3e-138 496.1 299 76.9
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 3.0e-138 495.7 370 67.3
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.0e-138 495.7 292 79.5
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 3.0e-138 495.7 311 75.2
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.9e-138 495.4 370 68.1
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.9e-138 495.4 370 68.1
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.9e-138 495.4 370 67.8
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 3.9e-138 495.4 368 67.4
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 6.6e-138 494.6 367 67.0
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 6.6e-138 494.6 350 70.0
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 1.1e-137 493.8 370 67.8
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.9e-137 493.0 379 65.4
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.5e-137 492.7 372 66.7
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 2.5e-137 492.7 355 69.6
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.3e-137 492.3 342 70.2
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.6e-137 491.5 373 67.0
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 5.6e-137 491.5 291 79.7
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 5.6e-137 491.5 348 67.2
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 7.3e-137 491.1 338 70.7
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 9.5e-137 490.7 355 69.0
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 2.1e-136 489.6 357 67.5
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 2.1e-136 489.6 298 76.5
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.1e-136 489.6 314 72.3
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 3.6e-136 488.8 359 69.6
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 4.7e-136 488.4 366 67.8
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 6.2e-136 488.0 330 72.7
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 6.2e-136 488.0 295 76.9
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 6.2e-136 488.0 290 78.3
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 8.0e-136 487.6 321 71.0
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.4e-135 486.9 348 70.7
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.8e-135 486.5 352 67.6
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 3.1e-135 485.7 292 78.1
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 4.0e-135 485.3 361 66.2
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 1.2e-134 483.8 351 69.8
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.2e-134 483.8 299 74.2
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 1.2e-134 483.8 291 77.3
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 2.6e-134 482.6 373 65.7
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 3.4e-134 482.3 299 74.2
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 3.4e-134 482.3 363 66.1
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 9.8e-134 480.7 376 65.7
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 9.8e-134 480.7 419 59.9
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.7e-133 479.9 365 64.4
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 6.4e-133 478.0 298 74.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.9e-132 476.5 350 66.9
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 4.1e-132 475.3 364 63.2
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 5.4e-132 474.9 353 66.0
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 5.4e-132 474.9 348 68.4
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 7.0e-132 474.6 304 73.4
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 2.1e-131 473.0 374 64.2
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 2.1e-131 473.0 362 65.7
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 3.5e-131 472.2 298 74.2
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.3e-130 469.5 330 67.3
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 3.0e-130 469.2 325 68.9
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.0e-130 469.2 376 62.5
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.5e-129 466.8 368 64.4
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 3.6e-128 462.2 287 74.6
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.6e-128 462.2 363 64.2
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 6.2e-128 461.5 418 59.8
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 1.1e-124 450.7 397 58.7
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 3.9e-122 442.2 343 65.3
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 5.1e-122 441.8 358 64.2
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 9.5e-121 437.6 330 63.9
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 4.7e-120 435.3 365 59.2
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 8.1e-120 434.5 270 75.2
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 4.4e-118 428.7 291 67.0
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 2.1e-115 419.9 304 63.8
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 6.0e-115 418.3 327 60.6
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.7e-114 416.8 329 63.8
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 5.6e-113 411.8 327 59.9
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.6e-112 410.2 310 61.6
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.4e-110 402.5 229 80.8
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 5.3e-103 378.6 409 52.6
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 1.3e-96 357.5 301 59.1
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 5.1e-90 335.5 305 61.3
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 4.8e-88 328.9 182 79.7
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 2.3e-82 310.1 212 72.6
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.9e-82 309.3 258 66.3
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 4.3e-81 305.8 215 65.6
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 4.2e-76 289.3 211 66.8
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 7.2e-76 288.5 256 59.4
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 5.7e-73 278.9 185 69.7
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 3.2e-68 263.1 291 50.2
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.4e-57 226.1 242 55.8
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.7e-21 107.8 63 81.0
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 2.5e-20 104.0 94 53.2
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.2e-17 95.1 95 52.6
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 4.4e-17 93.2 95 51.6
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 1.9e-07 61.2 36 66.7


User provided reference genes

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