Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 2.7e-86 322.0 169 100.0
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 4.6e-86 321.2 169 99.4
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 1.5e-84 316.2 169 98.2
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 1.5e-84 316.2 169 98.2
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 3.6e-78 295.0 169 90.5
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 1.1e-71 273.5 169 82.2
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 4.2e-71 271.6 169 81.7
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 9.4e-71 270.4 169 81.1
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 3.6e-70 268.5 169 80.5
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 4.7e-70 268.1 169 80.5
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 7.9e-70 267.3 169 80.5
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 2.8e-67 258.8 169 78.7
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 1.4e-66 256.5 169 76.9
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 9.1e-66 253.8 169 76.9
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 9.1e-66 253.8 167 78.4
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 2.2e-64 249.2 167 76.0
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 5.5e-63 244.6 169 74.6
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 1.9e-55 219.5 167 68.9
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.5e-52 209.9 171 65.5
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 9.7e-52 207.2 169 63.9
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 3.7e-51 205.3 168 63.1
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 2.9e-48 195.7 151 68.2
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 3.8e-48 195.3 169 61.5
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 3.2e-47 192.2 169 61.5
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 1.3e-43 180.3 168 57.1
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 7.7e-41 171.0 154 59.7
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 2.3e-40 169.5 143 58.7
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 5.0e-40 168.3 169 56.8
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 1.8e-37 159.8 168 52.4
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 1.2e-36 157.1 148 55.4
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 1.2e-36 157.1 148 55.4
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 2.0e-36 156.4 168 51.2
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 2.0e-36 156.4 168 51.2
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 5.6e-31 138.3 95 72.6
C08p13970 Brassica napus HOM05D009121 ORTHO05D001888 8.0e-22 107.8 71 77.5
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 3.3e-15 85.9 165 30.3
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 9.5e-15 84.3 155 34.2
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 9.5e-15 84.3 132 33.3
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 4.0e-13 79.0 151 33.8
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 4.0e-13 79.0 172 31.4
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 5.2e-13 78.6 147 30.6
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 1.5e-12 77.0 151 31.8
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 2.0e-12 76.6 133 33.8
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 2.0e-12 76.6 155 34.2
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 2.6e-12 76.3 158 33.5
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 3.4e-12 75.9 147 29.3
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 4.4e-12 75.5 152 29.6
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 7.5e-12 74.7 150 32.7
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.3e-11 73.9 133 30.8
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 1.3e-11 73.9 149 30.2
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 1.3e-11 73.9 150 32.7
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 1.3e-11 73.9 150 32.7
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 1.3e-11 73.9 150 32.7
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 1.3e-11 73.9 161 31.7
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.3e-11 73.9 149 32.2
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 2.2e-11 73.2 152 31.6
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 2.9e-11 72.8 133 30.1
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 2.9e-11 72.8 159 30.8
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 6.4e-11 71.6 136 30.1
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 6.4e-11 71.6 136 30.1
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 8.3e-11 71.2 133 30.1
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 1.1e-10 70.9 146 32.2
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 1.4e-10 70.5 134 29.9
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 1.9e-10 70.1 151 31.1
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 2.4e-10 69.7 162 28.4
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 2.4e-10 69.7 162 28.4
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 2.4e-10 69.7 134 26.1
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 2.4e-10 69.7 136 29.4
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 2.4e-10 69.7 146 28.1
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 2.4e-10 69.7 146 28.1
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 2.4e-10 69.7 143 27.3
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 2.4e-10 69.7 131 29.0
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 3.2e-10 69.3 148 29.7
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 4.1e-10 68.9 151 30.5
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 5.4e-10 68.6 151 30.5
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 7.1e-10 68.2 131 31.3
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 9.2e-10 67.8 152 26.3
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 9.2e-10 67.8 161 31.7
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 1.2e-09 67.4 160 31.2
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.2e-09 67.4 155 31.0
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 2.1e-09 66.6 153 30.1
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 2.1e-09 66.6 135 28.1
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 6.0e-09 65.1 162 32.7
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 7.8e-09 64.7 147 28.6
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.0e-08 64.3 152 27.0
Nn3g21713 Nelumbo nucifera HOM05D005742 ORTHO05D001888 1.0e-08 64.3 145 27.6
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.3e-08 63.9 153 29.4
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 2.3e-08 63.2 154 30.5
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 2.3e-08 63.2 132 32.6
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 2.3e-08 63.2 132 32.6
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 3.0e-08 62.8 155 30.3
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 3.0e-08 62.8 155 30.3
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 3.0e-08 62.8 149 28.9
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 5.1e-08 62.0 138 29.7
Sed0009222 Sechium edule HOM05D005742 ORTHO05D001888 5.1e-08 62.0 153 28.8
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 6.6e-08 61.6 155 30.3
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 8.6e-08 61.2 139 29.5
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.1e-07 60.8 134 29.9
Nn4g25584 Nelumbo nucifera HOM05D005742 ORTHO05D001888 1.5e-07 60.5 146 30.8
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 1.9e-07 60.1 144 31.2
Duzib052G0264 Durio zibethinus HOM05D005742 ORTHO05D001888 1.9e-07 60.1 151 28.5
TAR633G1530 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.9e-07 60.1 144 31.9
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 2.5e-07 59.7 145 29.7
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 2.5e-07 59.7 141 27.7
vmacro08056 Vaccinium macrocarpon HOM05D001258 ORTHO05D000158 2.5e-07 59.7 134 29.1
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 5.6e-07 58.5 137 29.2
RcHm_v2.0_Chr4g0424831 Rosa chinensis HOM05D005742 ORTHO05D001888 5.6e-07 58.5 146 28.1
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 9.5e-07 57.8 113 32.7
Prupe.1G249100 Prunus persica HOM05D008070 ORTHO05D001888 1.2e-06 57.4 147 26.5
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 1.6e-06 57.0 113 32.7
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 1.6e-06 57.0 153 26.1
Dinv44293 Davidia involucrata HOM05D005742 ORTHO05D001888 2.1e-06 56.6 143 28.7
Cpa.g.sc69.89 Carica papaya HOM05D008070 ORTHO05D001888 2.8e-06 56.2 166 28.3
Gohir.D02G058775 Gossypium hirsutum HOM05D005742 ORTHO05D001888 4.7e-06 55.5 146 28.8
Thecc.04G299300 Theobroma cacao HOM05D005742 ORTHO05D001888 4.7e-06 55.5 146 28.1
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 8.1e-06 54.7 121 28.1
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 8.1e-06 54.7 136 27.2
QL06p011856 Quercus lobata HOM05D005742 ORTHO05D001888 8.1e-06 54.7 144 30.6


User provided reference genes

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