Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 6.4e-74 282.7 225 100.0
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 8.6e-71 272.3 225 96.4
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 3.3e-70 270.4 228 96.1
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 4.7e-69 266.5 228 95.6
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 8.1e-61 239.2 231 90.0
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 9.3e-57 225.7 236 86.0
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 1.2e-56 225.3 236 85.2
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 3.9e-55 220.3 236 84.3
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 1.5e-54 218.4 236 84.3
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 5.8e-51 206.5 238 82.8
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.9e-42 177.6 230 74.8
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 6.9e-36 156.4 235 72.8
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 7.2e-25 119.8 156 50.0
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.3e-23 115.5 148 48.6
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.6e-21 108.6 257 54.5
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 9.1e-20 102.8 145 44.8
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 1.2e-19 102.4 145 44.8
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 1.2e-19 102.4 244 60.2
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 2.0e-19 101.7 168 43.5
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 2.6e-19 101.3 236 60.6
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 4.5e-19 100.5 253 58.5
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 5.9e-19 100.1 236 60.2
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.3e-18 99.0 186 70.4
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 3.8e-18 97.4 177 41.2
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 5.0e-18 97.1 149 41.6
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 5.0e-18 97.1 244 57.4
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 6.5e-18 96.7 182 71.4
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 8.5e-18 96.3 192 71.4
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 2.5e-17 94.7 107 82.2
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 3.2e-17 94.4 152 78.3
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 4.2e-17 94.0 168 38.7
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 4.2e-17 94.0 152 78.3
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 4.2e-17 94.0 181 67.4
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 5.5e-17 93.6 200 60.0
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 9.4e-17 92.8 168 37.5
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 2.1e-16 91.7 156 77.6
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 2.1e-16 91.7 184 64.7
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 2.1e-16 91.7 233 61.8
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 4.6e-16 90.5 148 39.2
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 4.6e-16 90.5 170 40.0
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 4.6e-16 90.5 109 50.5
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 4.6e-16 90.5 93 57.0
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 6.1e-16 90.1 101 55.4
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 6.1e-16 90.1 182 68.7
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 7.9e-16 89.7 102 53.9
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 7.9e-16 89.7 151 55.0
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 1.0e-15 89.4 102 53.9
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 8.8e-15 86.3 130 42.3
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 8.8e-15 86.3 137 43.1
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 1.1e-14 85.9 142 77.5
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.1e-14 85.9 214 46.3
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 1.5e-14 85.5 184 66.8
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 1.5e-14 85.5 133 88.7
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 1.5e-14 85.5 133 88.0
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 2.6e-14 84.7 220 60.9
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 3.3e-14 84.3 148 40.5
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.3e-14 84.3 103 50.5
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 4.4e-14 84.0 198 52.5
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 4.4e-14 84.0 198 49.0
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 7.4e-14 83.2 235 60.9
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 9.7e-14 82.8 150 40.0
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 9.7e-14 82.8 182 68.1
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 9.7e-14 82.8 130 68.5
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.3e-13 82.4 132 42.4
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.7e-13 82.0 160 40.6
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.7e-13 82.0 124 72.6
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 1.7e-13 82.0 124 72.6
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.8e-13 81.3 205 46.3
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 3.7e-13 80.9 108 48.1
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 3.7e-13 80.9 108 48.1
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 1.1e-12 79.3 115 45.2
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.8e-12 78.6 169 36.7
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.8e-12 78.6 108 45.4
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 5.3e-12 77.0 154 68.2
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 9.1e-12 76.3 194 62.4
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 9.1e-12 76.3 96 83.3
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 9.1e-12 76.3 122 45.9
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.2e-11 75.9 140 40.7
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 2.6e-11 74.7 189 65.1
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 3.4e-11 74.3 178 35.4
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 7.7e-11 73.2 161 69.6
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 1.0e-10 72.8 119 45.4
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 1.7e-10 72.0 114 60.5
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.2e-10 71.6 158 58.2
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 6.5e-10 70.1 256 51.6
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 6.5e-10 70.1 96 44.8
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.1e-09 69.3 124 41.1
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 1.1e-09 69.3 174 51.7
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.4e-09 68.9 93 45.2
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.4e-09 68.9 82 48.8
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 2.5e-09 68.2 138 37.7
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.2e-09 67.8 82 47.6
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 9.4e-09 66.2 89 44.9
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 9.4e-09 66.2 161 33.5
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.2e-08 65.9 99 46.5
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.7e-08 63.9 93 41.9
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 6.1e-08 63.5 106 72.6
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.0e-07 62.8 145 57.9
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 1.0e-07 62.8 72 45.8
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 1.4e-07 62.4 89 43.8
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 1.4e-07 62.4 118 36.4
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 2.3e-07 61.6 95 44.2
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 2.3e-07 61.6 42 61.9
TPR.G12357 Trifolium pratense HOM05D006739 ORTHO05D008402 2.3e-07 61.6 56 51.8
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.9e-07 60.8 75 44.0
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.9e-07 60.8 75 44.0
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 9.7e-06 56.2 107 35.5


User provided reference genes

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