Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 7.7e-115 417.2 210 100.0
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 3.2e-113 411.8 210 98.6
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 3.2e-113 411.8 210 98.6
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 9.4e-105 383.6 210 90.5
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 8.0e-104 380.6 210 90.0
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 6.0e-67 258.1 169 77.5
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 7.1e-60 234.6 183 66.7
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 6.9e-47 191.4 189 55.6
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 2.0e-46 189.9 196 53.1
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 5.8e-46 188.3 179 57.0
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.0e-42 177.6 186 51.6
C05p07370 Brassica napus HOM05D013394 ORTHO05D009712 3.9e-42 175.6 196 54.6
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 1.3e-13 80.9 180 31.1
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.7e-13 80.5 164 30.5
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 1.9e-12 77.0 165 32.1
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.5e-12 76.6 179 27.9
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 4.2e-12 75.9 169 27.8
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 1.2e-11 74.3 179 29.6
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 2.7e-11 73.2 179 29.1
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 6.1e-11 72.0 166 27.7
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 3.0e-10 69.7 167 26.9
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 8.8e-10 68.2 152 28.9
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.5e-09 67.4 159 25.8
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 2.0e-09 67.0 179 27.4
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 3.3e-09 66.2 147 27.2
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 4.4e-09 65.9 166 27.1
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 7.4e-09 65.1 176 26.1
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.2e-08 63.5 146 26.7
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 2.8e-08 63.2 151 27.8
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 2.8e-08 63.2 145 27.6
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 3.7e-08 62.8 147 26.5
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 3.7e-08 62.8 149 29.5
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 4.8e-08 62.4 149 28.9
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 4.8e-08 62.4 175 26.3
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 4.8e-08 62.4 149 28.9
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 8.2e-08 61.6 162 27.2
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.2e-08 61.6 162 27.2
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.2e-08 61.6 162 27.2
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 8.2e-08 61.6 142 26.8
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 8.2e-08 61.6 137 28.5
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.1e-07 61.2 149 26.8
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 1.1e-07 61.2 143 27.3
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.1e-07 61.2 143 27.3
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 1.1e-07 61.2 152 27.0
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 1.1e-07 61.2 149 28.2
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 1.4e-07 60.8 167 24.0
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.8e-07 60.5 144 28.5
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 4.1e-07 59.3 149 26.8
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 7.0e-07 58.5 170 25.9
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 1.2e-06 57.8 147 25.2


User provided reference genes

Program Settings