Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p06960 Brassica napus HOM05D003118 ORTHO05D032428 3.2e-184 648.3 324 100.0
BolC5t29453H Brassica oleracea HOM05D003118 ORTHO05D032428 1.6e-175 619.4 311 99.4
BraA06t23787Z Brassica rapa HOM05D003118 ORTHO05D003618 5.1e-142 508.1 346 79.5
A06p05760 Brassica napus HOM05D003118 ORTHO05D003618 1.9e-141 506.1 359 77.7
BcaB07g34111 Brassica carinata HOM05D003118 ORTHO05D003618 1.1e-99 367.5 365 61.4
BcaC05g24746 Brassica carinata HOM05D003118 ORTHO05D032428 6.8e-78 295.0 311 57.6
Thhalv10007035m.g Eutrema salsugineum HOM05D003118 ORTHO05D003618 7.5e-77 291.6 407 49.1
Sp1g07530 Schrenkiella parvula HOM05D003118 ORTHO05D003618 8.6e-73 278.1 443 45.4
BraA08t35403Z Brassica rapa HOM05D003118 ORTHO05D003618 1.3e-68 264.2 401 46.6
C08p12330 Brassica napus HOM05D003118 ORTHO05D003618 1.2e-66 257.7 389 47.8
BolC8t48874H Brassica oleracea HOM05D003118 ORTHO05D003618 1.2e-66 257.7 389 47.8
A08p34920 Brassica napus HOM05D003118 ORTHO05D003618 2.1e-66 256.9 389 47.6
BraA09t41913Z Brassica rapa HOM05D003118 ORTHO05D003618 6.2e-63 245.4 402 45.5
A09p65700 Brassica napus HOM05D003118 ORTHO05D003618 8.4e-60 235.0 397 43.8
C08p49770 Brassica napus HOM05D003118 ORTHO05D003618 3.2e-59 233.0 398 43.7
BolC8t52504H Brassica oleracea HOM05D003118 ORTHO05D003618 5.1e-57 225.7 401 44.1
Carub.0001s0824 Capsella rubella HOM05D003118 ORTHO05D003618 1.5e-53 214.2 498 37.1
BcaC07g41918 Brassica carinata HOM05D003118 ORTHO05D003618 2.0e-53 213.8 397 42.3
AL1G19340 Arabidopsis lyrata HOM05D003118 ORTHO05D003618 3.4e-45 186.4 526 32.7
AT1G08910 Arabidopsis thaliana HOM05D003118 ORTHO05D003618 1.9e-43 180.6 518 33.4
CARHR008810 Cardamine hirsuta HOM05D003118 ORTHO05D003618 6.0e-42 175.6 508 33.5
Aa31sc17G150 Aethionema arabicum HOM05D003118 ORTHO05D003618 2.4e-30 137.1 361 36.8
BcaB03g13535 Brassica carinata HOM05D003118 ORTHO05D003618 1.3e-25 121.3 208 41.8
BcaB03g13534 Brassica carinata HOM05D003118 ORTHO05D095379 1.2e-10 71.6 59 71.2
Thecc.03G287000 Theobroma cacao HOM05D003118 ORTHO05D003618 4.1e-06 56.6 135 31.1


User provided reference genes

Program Settings