Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.5e-156 556.2 288 100.0
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 2.8e-152 542.0 288 96.5
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 1.1e-151 540.0 288 96.2
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 4.1e-151 538.1 287 96.2
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 1.3e-141 506.5 271 94.8
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 3.6e-139 498.4 287 89.5
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 4.4e-137 491.5 287 88.9
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 4.4e-137 491.5 290 89.7
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 2.4e-135 485.7 288 87.5
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 1.6e-131 473.0 288 84.4
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 6.4e-128 461.1 288 83.7
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 6.4e-128 461.1 288 82.3
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 4.6e-126 454.9 288 83.0
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 1.0e-117 427.2 266 81.2
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.3e-117 426.8 288 75.7
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 1.3e-101 373.6 288 65.3
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 8.7e-101 370.9 289 67.1
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.5e-100 370.2 289 67.1
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.5e-100 369.4 289 67.5
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 2.5e-100 369.4 289 67.1
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 9.6e-100 367.5 288 67.0
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 1.8e-98 363.2 288 66.7
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 3.1e-98 362.5 288 66.3
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 6.9e-98 361.3 290 64.5
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 4.5e-97 358.6 290 65.2
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 9.9e-97 357.5 287 63.4
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 3.8e-96 355.5 290 64.5
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 6.4e-96 354.8 290 63.8
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 8.4e-96 354.4 245 72.2
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 8.4e-96 354.4 287 62.0
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.4e-95 353.6 287 63.1
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.4e-95 352.8 288 65.6
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 7.1e-95 351.3 287 64.1
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 9.3e-95 350.9 288 62.8
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 1.2e-94 350.5 287 63.4
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 1.6e-94 350.1 289 62.6
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.6e-94 350.1 287 62.7
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 3.5e-94 349.0 289 63.0
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 7.9e-94 347.8 288 63.9
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.0e-93 347.4 288 61.8
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.3e-93 347.1 288 62.2
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.3e-93 347.1 288 61.8
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 3.0e-93 345.9 287 62.7
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.7e-93 344.7 287 64.8
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.5e-92 343.6 287 64.8
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.5e-92 343.6 288 64.9
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 1.9e-92 343.2 288 60.8
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 5.6e-92 341.7 287 62.0
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 9.6e-92 340.9 287 62.0
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.3e-91 340.5 288 61.5
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 1.6e-91 340.1 272 64.3
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 8.1e-91 337.8 287 61.3
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 2.4e-90 336.3 288 60.1
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 4.0e-90 335.5 287 59.6
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 5.3e-90 335.1 289 61.6
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 6.9e-90 334.7 287 63.1
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 9.0e-90 334.3 289 61.2
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.2e-89 334.0 269 64.3
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 1.2e-89 334.0 289 61.6
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 3.4e-89 332.4 292 59.9
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.1e-87 327.4 282 61.0
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.4e-87 327.0 292 61.0
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.9e-87 326.6 299 58.9
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.2e-87 325.9 267 65.9
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 5.5e-87 325.1 243 68.3
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 5.5e-87 325.1 287 58.5
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 7.1e-87 324.7 287 59.6
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 1.2e-86 323.9 290 56.6
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 2.7e-86 322.8 288 58.0
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 3.5e-86 322.4 257 62.6
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 4.6e-86 322.0 299 58.2
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 1.8e-85 320.1 279 59.9
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 2.3e-85 319.7 260 61.2
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 7.4e-84 314.7 224 67.9
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.3e-83 313.9 294 56.1
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.6e-83 313.5 222 68.0
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 4.8e-83 312.0 240 65.0
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 4.8e-83 312.0 222 68.0
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.4e-82 309.7 298 55.0
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 2.4e-82 309.7 290 58.3
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 4.1e-82 308.9 255 61.2
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 4.1e-82 308.9 287 57.8
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 2.0e-81 306.6 274 59.9
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 5.9e-81 305.1 294 55.8
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 1.3e-80 303.9 223 66.8
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 2.1e-78 296.6 249 65.1
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.8e-77 293.5 269 57.6
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.9e-77 292.4 246 64.2
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 5.1e-77 292.0 270 56.7
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 8.7e-77 291.2 266 60.5
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.5e-76 289.7 283 53.4
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 3.3e-76 289.3 245 58.4
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 4.3e-76 288.9 296 54.1
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 7.4e-76 288.1 313 54.0
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 2.4e-74 283.1 240 68.3
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 5.9e-73 278.5 284 53.2
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.9e-71 273.5 290 54.8
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 6.1e-70 268.5 268 54.5
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 8.2e-67 258.1 184 67.4
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.8e-66 256.9 273 51.3
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.2e-65 254.2 222 55.9
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.0e-64 251.1 222 52.7
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.3e-64 250.8 246 54.9
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 1.7e-64 250.4 223 55.2
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 1.7e-64 250.4 231 51.1
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 5.5e-63 245.4 251 51.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 7.2e-63 245.0 175 68.0
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.6e-62 243.8 173 67.1
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 2.0e-60 236.9 255 49.0
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 2.4e-58 229.9 321 43.3
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 1.8e-53 213.8 168 64.9
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 6.7e-53 211.8 293 42.3
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 7.5e-52 208.4 142 71.8
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.8e-50 203.8 186 51.6
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 5.5e-47 192.2 282 41.1
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 9.5e-39 164.9 138 64.5
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 9.5e-39 164.9 112 68.8
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 6.8e-37 158.7 218 44.0
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 3.4e-36 156.4 227 40.1
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 2.9e-32 143.3 112 63.4
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 6.6e-32 142.1 79 84.8
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 6.6e-32 142.1 79 83.5
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 3.3e-31 139.8 130 58.5
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 5.6e-31 139.0 79 83.5
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 1.2e-28 131.3 80 81.2
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 3.5e-25 119.8 188 36.2
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 3.9e-24 116.3 80 77.5
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 6.8e-21 105.5 74 63.5
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 3.5e-17 93.2 52 88.5
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 7.8e-17 92.0 146 31.5
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 5.0e-16 89.4 197 28.4
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 1.4e-13 81.3 104 50.0
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.8e-13 80.9 104 49.0
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.8e-13 80.9 104 49.0
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.1e-13 80.1 104 49.0
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 6.8e-13 79.0 104 48.1
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 3.7e-11 73.2 103 44.7
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 1.4e-10 71.2 65 53.8
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 2.1e-09 67.4 54 63.0
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 2.3e-08 63.9 60 56.7
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 3.9e-08 63.2 234 28.6
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.6e-06 57.8 131 33.6


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