Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 4.8e-73 277.7 137 100.0
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 4.8e-73 277.7 137 100.0
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 4.8e-73 277.7 137 100.0
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 5.8e-71 270.8 137 97.1
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 5.8e-71 270.8 137 97.1
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.9e-69 265.8 137 94.2
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 3.1e-64 248.4 137 90.5
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 9.9e-63 243.4 139 89.2
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.7e-62 242.7 140 87.9
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.1e-61 240.0 140 86.4
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 2.3e-59 232.3 140 81.4
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 8.7e-59 230.3 140 83.6
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 9.6e-58 226.9 138 81.2
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.1e-50 203.4 135 69.6
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.6e-49 199.5 137 65.7
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.6e-49 199.5 135 69.6
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 4.8e-49 198.0 137 67.2
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.1e-48 195.3 135 67.4
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 3.1e-48 195.3 133 71.4
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 3.1e-48 195.3 135 67.4
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 5.3e-48 194.5 138 65.9
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.6e-47 192.2 135 64.4
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 5.9e-47 191.0 137 65.7
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.0e-46 190.3 137 65.7
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.3e-46 189.9 134 66.4
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 6.5e-46 187.6 134 67.2
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.5e-45 185.7 137 64.2
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 4.2e-45 184.9 135 63.7
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.6e-44 183.0 137 62.8
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 2.7e-44 182.2 135 65.9
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 3.6e-44 181.8 138 65.9
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 4.6e-44 181.4 137 62.0
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 6.1e-44 181.0 130 66.9
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 7.9e-44 180.6 137 63.5
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 7.9e-44 180.6 135 65.2
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 1.0e-43 180.3 136 62.5
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.0e-43 180.3 135 64.4
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 2.3e-43 179.1 135 61.5
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.0e-43 178.7 130 67.7
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 6.7e-43 177.6 135 61.5
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 8.8e-43 177.2 130 63.8
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.5e-42 176.4 143 63.6
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 1.5e-42 176.4 138 62.3
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.0e-42 176.0 136 63.2
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.0e-42 176.0 135 63.0
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 5.7e-42 174.5 136 61.8
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 7.4e-42 174.1 138 63.0
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.3e-41 173.3 138 63.0
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 3.1e-40 168.7 144 58.3
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 3.1e-40 168.7 145 57.9
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 3.1e-40 168.7 142 57.0
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 5.3e-40 167.9 136 59.6
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 9.1e-40 167.2 139 57.6
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 9.1e-40 167.2 142 57.0
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 9.1e-40 167.2 138 56.5
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 9.1e-40 167.2 138 56.5
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 9.1e-40 167.2 138 55.8
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.2e-39 166.8 133 58.6
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 3.4e-39 165.2 133 59.4
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 3.4e-39 165.2 138 58.0
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 5.9e-39 164.5 137 59.1
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 2.2e-38 162.5 134 58.2
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 2.9e-38 162.2 135 55.6
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 3.8e-38 161.8 157 53.5
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 5.0e-38 161.4 134 57.5
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 5.0e-38 161.4 133 60.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 6.5e-38 161.0 137 57.7
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 8.5e-38 160.6 130 59.2
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.9e-37 159.5 142 53.5
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.5e-37 159.1 138 57.2
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 5.5e-37 157.9 134 56.7
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 7.2e-37 157.5 137 57.7
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 7.2e-37 157.5 134 56.7
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 3.6e-36 155.2 169 47.9
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 4.7e-36 154.8 134 55.2
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 3.9e-35 151.8 106 65.1
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 2.2e-33 146.0 133 55.6
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 8.2e-33 144.1 138 51.4
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.1e-32 143.7 145 49.7
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.0e-30 137.1 97 62.9
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 8.5e-30 134.0 100 63.0
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 4.2e-29 131.7 99 63.6
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.6e-28 128.6 100 61.0
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 9.7e-26 120.6 137 49.6
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 9.7e-26 120.6 137 49.6
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 3.7e-25 118.6 135 51.1
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 4.8e-25 118.2 83 61.4
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.1e-24 115.5 120 50.0
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.6e-23 113.2 140 43.6
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 3.5e-23 112.1 142 45.8
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.9e-22 109.0 98 58.2
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 2.9e-22 109.0 99 58.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 3.8e-22 108.6 132 43.2
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.5e-21 105.9 95 56.8
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 9.4e-21 104.0 106 49.1
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 9.4e-21 104.0 123 45.5
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.0e-19 100.5 94 55.3
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 5.2e-19 98.2 147 41.5
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 1.2e-15 87.0 80 52.5
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.6e-15 86.7 82 52.4
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 2.2e-14 82.8 153 37.9
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.5e-13 80.1 82 51.2
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.0e-11 73.9 82 48.8
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 2.6e-10 69.3 88 47.7
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.8e-08 63.2 40 72.5
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 5.4e-08 61.6 60 50.0


User provided reference genes

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