Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 2.1e-162 575.9 342 100.0
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.2e-159 565.8 342 98.8
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 3.2e-158 562.0 342 98.5
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 2.3e-156 555.8 343 97.1
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 2.3e-156 555.8 343 97.1
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 4.7e-154 548.1 342 95.3
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 2.7e-149 532.3 345 92.5
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 3.0e-148 528.9 345 92.5
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 1.5e-147 526.6 345 91.9
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 3.3e-147 525.4 345 92.2
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 1.6e-146 523.1 345 91.6
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 1.8e-145 519.6 345 91.0
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 2.8e-138 495.7 345 84.1
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 2.4e-113 412.9 342 76.6
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 9.7e-91 337.8 320 56.6
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 6.9e-89 331.6 318 55.3
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 2.9e-87 326.2 342 52.6
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 4.2e-86 322.4 338 58.0
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 7.2e-86 321.6 317 63.7
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 1.6e-85 320.5 318 63.5
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.7e-85 319.7 331 60.4
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 3.6e-85 319.3 318 66.0
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 7.9e-85 318.2 312 63.5
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 3.9e-84 315.8 323 50.5
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 5.1e-84 315.5 318 61.3
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 8.8e-84 314.7 318 59.7
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 8.8e-84 314.7 318 60.1
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.1e-83 314.3 335 60.9
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.5e-83 313.9 316 59.5
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 2.0e-83 313.5 346 60.1
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 2.6e-83 313.2 317 54.3
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.6e-83 313.2 313 61.0
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 5.7e-83 312.0 323 63.8
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 7.4e-83 311.6 319 57.1
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.3e-82 310.8 324 60.2
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 1.3e-82 310.8 320 60.3
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 2.8e-82 309.7 317 57.4
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.8e-82 309.7 323 50.2
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 3.7e-82 309.3 345 49.3
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 4.8e-82 308.9 318 61.9
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.8e-81 307.0 331 59.5
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 3.1e-81 306.2 343 61.2
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 4.1e-81 305.8 323 50.5
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 4.1e-81 305.8 321 50.8
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 6.9e-81 305.1 333 60.7
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 9.1e-81 304.7 317 52.1
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 1.5e-80 303.9 333 51.4
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 1.5e-80 303.9 320 58.1
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 7.7e-80 301.6 313 57.2
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.0e-79 301.2 321 59.5
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 1.7e-79 300.4 327 51.1
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 2.9e-79 299.7 318 51.6
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 3.8e-79 299.3 317 62.8
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 5.0e-79 298.9 318 51.6
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 5.0e-79 298.9 318 51.6
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 8.5e-79 298.1 322 50.6
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 8.5e-79 298.1 299 52.8
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 5.5e-78 295.4 315 63.2
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 1.6e-77 293.9 317 49.8
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.6e-77 293.9 327 50.2
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 2.7e-77 293.1 331 60.4
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 3.6e-77 292.7 318 61.3
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 8.0e-77 291.6 299 63.5
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 6.7e-76 288.5 336 57.1
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 8.8e-76 288.1 307 51.5
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 1.1e-75 287.7 318 56.0
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 1.1e-75 287.7 346 45.7
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.5e-75 287.3 329 54.4
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 4.4e-75 285.8 326 59.5
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 9.7e-75 284.6 330 48.2
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 4.8e-74 282.3 343 48.7
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 1.1e-73 281.2 346 46.2
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.4e-73 280.8 316 59.2
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 7.0e-73 278.5 312 47.8
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 9.1e-73 278.1 341 46.3
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 1.2e-72 277.7 339 46.6
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.0e-71 274.6 325 57.5
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 2.1e-69 266.9 340 54.1
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 2.1e-69 266.9 335 45.7
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 3.6e-69 266.2 345 43.5
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 5.2e-68 262.3 320 46.6
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 6.7e-68 261.9 320 47.8
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 2.0e-67 260.4 335 45.4
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 9.1e-65 251.5 318 42.8
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 3.5e-64 249.6 318 42.8
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.5e-62 244.2 329 55.0
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.7e-61 240.0 317 42.9
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 7.5e-59 231.9 319 50.8
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 2.4e-57 226.9 342 39.8
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 7.0e-57 225.3 268 46.6
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 8.6e-55 218.4 231 65.8
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 5.2e-44 182.6 164 56.1
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 5.8e-43 179.1 164 56.7
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 3.3e-38 163.3 185 48.1
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 1.4e-33 147.9 112 62.5
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 8.6e-31 138.7 100 64.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 8.6e-31 138.7 155 51.0
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.8e-28 131.0 98 64.3
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 6.8e-28 129.0 108 61.1
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 8.6e-23 112.1 174 40.2
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 5.6e-22 109.4 183 55.2
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 2.3e-15 87.4 95 44.2
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 3.3e-14 83.6 119 42.9
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.6e-08 64.7 109 40.4
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 9.6e-06 55.5 66 45.5


User provided reference genes

Program Settings