Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p04480 Brassica napus HOM05D030240 ORTHO05D031710 2.1e-155 552.4 284 100.0
BolC5t29219H Brassica oleracea HOM05D030240 ORTHO05D031710 6.8e-98 361.3 202 92.6
BcaC05g24301 Brassica carinata HOM05D030240 ORTHO05D094818 5.1e-37 159.1 82 98.8
BcaC05g24300 Brassica carinata HOM05D030240 ORTHO05D031710 6.9e-34 148.7 71 100.0
BcaB08g36905 Brassica carinata HOM05D000008 ORTHO05D000005 1.3e-32 144.4 245 41.6
BolC3t13306H Brassica oleracea HOM05D000008 ORTHO05D000005 2.2e-27 127.1 247 38.5
BcaC04g18958 Brassica carinata HOM05D000008 ORTHO05D000005 2.8e-27 126.7 242 40.1
C03p08080 Brassica napus HOM05D000008 ORTHO05D000005 2.8e-27 126.7 247 38.5
C09p61800 Brassica napus HOM05D000008 ORTHO05D000005 2.8e-27 126.7 242 40.1
BolC9t59018H Brassica oleracea HOM05D000008 ORTHO05D000005 2.8e-27 126.7 242 40.1
Sp6g28760 Schrenkiella parvula HOM05D000008 ORTHO05D000005 4.5e-25 119.4 151 49.0
A10p23560 Brassica napus HOM05D000008 ORTHO05D000005 1.0e-24 118.2 243 38.7
BraA10t44422Z Brassica rapa HOM05D000008 ORTHO05D000005 1.0e-24 118.2 243 38.7
A03p07100 Brassica napus HOM05D000008 ORTHO05D000005 1.2e-22 111.3 249 37.3
BraA03t10032Z Brassica rapa HOM05D000008 ORTHO05D000005 1.2e-22 111.3 249 37.3
CARHR198000 Cardamine hirsuta HOM05D000008 ORTHO05D000005 5.1e-21 105.9 151 46.4
Thhalv10014101m.g Eutrema salsugineum HOM05D000008 ORTHO05D000005 6.7e-21 105.5 138 47.1
BcaB01g05063 Brassica carinata HOM05D000008 ORTHO05D000005 2.6e-20 103.6 247 36.0
AT5G15310 Arabidopsis thaliana HOM05D000008 ORTHO05D000005 6.9e-18 95.5 149 43.0
AL6G26190 Arabidopsis lyrata HOM05D000008 ORTHO05D000005 3.8e-16 89.7 153 41.8
Carub.0006s1350 Capsella rubella HOM05D000008 ORTHO05D000005 5.0e-16 89.4 137 45.3
C02p07650 Brassica napus HOM05D000008 ORTHO05D000005 3.3e-12 76.6 107 44.9
BcaC03g13416 Brassica carinata HOM05D000008 ORTHO05D000005 5.7e-12 75.9 133 39.8
BolC2t06697H Brassica oleracea HOM05D000008 ORTHO05D000005 5.7e-12 75.9 133 39.8
BraA02t05271Z Brassica rapa HOM05D000008 ORTHO05D000005 1.0e-08 65.1 135 37.8
A02p03000 Brassica napus HOM05D000008 ORTHO05D000005 1.7e-08 64.3 109 40.4
Aa31LG11G14230 Aethionema arabicum HOM05D000008 ORTHO05D000005 2.9e-08 63.5 182 37.4
BcaNung03316 Brassica carinata HOM05D000008 ORTHO05D000005 3.6e-06 56.6 107 38.3
BolC1t05930H Brassica oleracea HOM05D000008 ORTHO05D000005 4.7e-06 56.2 164 31.7


User provided reference genes

Program Settings