Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 3.5e-266 921.0 451 100.0
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.1e-259 899.4 451 98.9
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 3.0e-257 891.3 451 97.6
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 3.0e-257 891.3 451 97.6
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 4.6e-242 840.9 455 91.4
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 1.8e-241 839.0 451 91.6
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 5.7e-240 833.9 451 91.4
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.8e-238 828.9 451 91.1
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 4.5e-229 797.7 455 87.5
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 2.0e-221 772.3 455 85.7
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 4.2e-211 738.0 416 85.6
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.3e-196 689.1 455 72.7
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 2.9e-196 688.7 457 72.6
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 2.5e-195 685.6 415 80.0
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.3e-193 679.1 453 73.1
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 3.0e-193 678.7 450 74.4
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 6.8e-193 677.6 450 75.1
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 1.2e-192 676.8 417 78.2
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.0e-192 676.0 448 74.1
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 3.4e-192 675.2 402 85.8
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 3.7e-191 671.8 419 77.3
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 4.9e-191 671.4 419 78.0
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.1e-190 670.2 431 74.5
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.1e-190 670.2 450 73.8
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.8e-190 669.5 442 72.4
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 2.4e-190 669.1 420 76.4
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 2.4e-190 669.1 422 77.0
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 3.2e-190 668.7 424 76.2
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 3.2e-190 668.7 456 71.5
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 4.1e-190 668.3 429 74.6
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 4.1e-190 668.3 429 74.6
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 4.1e-190 668.3 442 72.6
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 1.6e-189 666.4 451 72.1
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 7.8e-189 664.1 445 71.7
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.0e-188 663.7 420 76.9
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 1.3e-188 663.3 423 76.6
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 1.3e-188 663.3 423 74.0
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.3e-188 662.5 423 74.9
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.9e-187 659.4 428 74.8
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.9e-187 659.4 443 72.0
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.5e-187 659.1 433 74.4
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 3.3e-187 658.7 419 76.8
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 7.3e-187 657.5 422 74.2
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 7.3e-187 657.5 469 70.6
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 7.3e-187 657.5 451 70.3
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.6e-186 656.4 409 77.3
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 2.1e-186 656.0 479 69.9
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 2.1e-186 656.0 423 75.4
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 3.6e-186 655.2 452 72.3
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 4.7e-186 654.8 422 74.2
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 6.2e-186 654.4 456 70.4
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 8.0e-186 654.1 424 73.1
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 4.0e-185 651.7 427 74.9
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.0e-184 649.4 428 72.4
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 2.2e-183 646.0 450 70.0
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.9e-182 642.9 443 70.2
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.7e-181 639.0 419 75.4
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 3.5e-181 638.6 421 73.6
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 5.6e-179 631.3 448 70.8
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.6e-176 622.5 421 71.3
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 7.8e-173 610.9 362 80.1
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 5.6e-171 604.7 368 77.4
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 9.5e-171 604.0 431 68.7
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 7.6e-168 594.3 389 73.8
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 7.6e-168 594.3 358 79.6
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.0e-164 583.9 406 70.7
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.3e-164 583.6 378 74.6
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 3.0e-164 582.4 521 58.7
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.9e-164 582.0 443 67.5
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 5.1e-164 581.6 424 65.8
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 8.7e-164 580.9 419 68.0
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 1.5e-163 580.1 406 67.2
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 1.9e-163 579.7 548 58.0
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 9.0e-161 570.9 387 72.4
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.9e-155 553.1 447 63.8
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 2.8e-154 549.3 390 70.0
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 3.7e-146 522.3 358 70.4
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 3.8e-143 512.3 359 68.5
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.1e-142 510.8 344 73.0
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 1.1e-142 510.8 320 75.3
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.0e-140 504.2 377 66.3
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.4e-137 493.0 358 68.7
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.1e-133 479.9 353 66.3
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.0e-132 477.6 425 60.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.5e-123 447.2 285 75.4
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.6e-120 436.4 371 60.4
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 3.1e-113 412.9 406 50.7
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.2e-112 411.0 455 48.6
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 5.9e-112 408.7 405 52.1
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 8.8e-108 394.8 404 48.3
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 4.1e-105 386.0 315 61.0
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 5.5e-102 375.6 234 75.6
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 2.8e-82 310.1 240 64.6
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 2.4e-81 307.0 200 74.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.0e-80 303.9 230 64.3
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 8.3e-66 255.4 427 37.5
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.2e-61 241.5 395 37.5
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 4.9e-58 229.6 139 78.4
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.2e-57 226.9 127 83.5
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 5.6e-54 216.1 172 66.9
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 9.9e-43 178.7 226 46.9
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 8.4e-42 175.6 410 29.8
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-41 174.5 212 42.0
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 2.3e-39 167.5 435 31.3
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 4.0e-36 156.8 89 83.1
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.9e-34 150.6 89 74.2
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 1.9e-30 137.9 127 55.9
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 2.5e-30 137.5 114 59.6
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 1.0e-26 125.6 122 52.5
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.0e-23 115.5 72 69.4
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.6e-21 108.2 84 65.5
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 5.0e-18 96.7 65 70.8
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.1e-16 89.7 45 91.1
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.3e-14 84.0 56 64.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.4e-12 78.6 72 54.2
BcaB02g06893 Brassica carinata HOM05D000595 ORTHO05D008454 6.5e-10 69.7 52 76.9
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.3e-07 61.2 67 43.3
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 5.1e-07 60.1 37 78.4
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 5.1e-07 60.1 37 78.4
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.5e-06 58.5 35 80.0
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.5e-06 58.5 53 47.2


User provided reference genes

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