Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.5e-87 326.2 176 100.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.5e-87 326.2 176 100.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 2.2e-86 322.4 176 98.3
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.0e-83 313.5 176 97.7
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 6.3e-78 294.3 178 92.7
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 5.9e-76 287.7 175 90.3
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.3e-75 286.6 176 89.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.9e-74 282.7 176 88.6
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 4.2e-74 281.6 177 88.7
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 4.2e-74 281.6 177 88.1
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 9.4e-74 280.4 178 88.8
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.2e-73 280.0 177 87.6
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.6e-73 279.6 179 88.8
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.6e-73 279.6 179 88.8
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.3e-72 275.8 177 87.6
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 2.0e-71 272.7 179 86.6
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 7.0e-69 264.2 176 85.2
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.9e-58 229.6 176 73.9
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.9e-50 203.0 172 68.6
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.3e-50 201.8 179 67.6
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.6e-49 199.9 177 65.0
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 4.7e-49 198.4 175 64.6
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 8.0e-49 197.6 175 66.3
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.4e-48 196.8 175 68.0
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.8e-48 196.4 180 65.0
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.1e-48 195.7 177 67.2
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 6.8e-48 194.5 178 63.5
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.5e-47 193.4 177 65.5
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.5e-47 193.4 138 76.8
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.6e-47 192.6 173 65.3
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.4e-47 192.2 173 65.3
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 4.4e-47 191.8 182 63.7
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.3e-46 190.3 179 63.7
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 2.2e-46 189.5 187 62.6
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 2.2e-46 189.5 162 66.7
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 2.9e-46 189.1 180 62.2
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 4.9e-46 188.3 177 63.8
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 2.4e-45 186.0 180 61.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 2.4e-45 186.0 153 66.7
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.2e-45 185.7 125 76.0
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 3.2e-45 185.7 188 58.5
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 3.2e-45 185.7 177 61.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 5.4e-45 184.9 177 61.6
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 7.0e-45 184.5 180 61.1
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 9.2e-45 184.1 177 63.3
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 9.2e-45 184.1 170 63.5
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 9.2e-45 184.1 167 65.3
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.2e-44 183.7 143 68.5
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.6e-44 183.3 185 60.0
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 2.0e-44 183.0 178 59.6
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 2.0e-44 183.0 178 62.9
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.7e-44 182.6 136 75.0
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.7e-44 182.6 178 63.5
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 3.5e-44 182.2 178 61.8
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 6.0e-44 181.4 176 61.4
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.0e-43 180.6 179 60.3
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.0e-43 180.6 173 63.0
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.3e-43 180.3 174 61.5
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 1.3e-43 180.3 182 58.2
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.7e-43 179.9 170 62.4
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.7e-43 179.9 170 62.4
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.7e-43 179.9 136 69.9
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.7e-43 179.9 112 81.2
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.7e-43 179.9 175 59.4
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.3e-43 179.5 177 60.5
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.3e-43 179.5 174 60.9
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.3e-43 179.5 181 60.8
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.3e-43 179.5 174 62.1
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.0e-43 179.1 182 57.7
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.0e-43 179.1 115 78.3
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 6.6e-43 177.9 132 71.2
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.6e-43 177.9 174 62.6
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.6e-43 177.9 115 80.9
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.5e-42 176.8 173 63.6
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.5e-42 176.8 173 63.6
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.5e-42 176.8 137 69.3
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.5e-42 176.0 173 61.3
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 2.5e-42 176.0 172 61.0
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.3e-42 175.6 179 60.9
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.3e-42 175.6 175 60.0
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.3e-42 175.6 178 60.7
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 7.3e-42 174.5 176 58.5
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 9.5e-42 174.1 175 58.9
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.2e-41 173.7 136 69.1
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.2e-41 173.7 136 69.1
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.1e-41 172.9 166 59.0
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.1e-41 172.9 172 58.7
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.8e-41 172.6 172 58.7
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 2.8e-41 172.6 173 59.0
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 3.6e-41 172.2 175 58.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 4.7e-41 171.8 177 58.8
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 6.2e-41 171.4 173 59.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 6.2e-41 171.4 180 57.8
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 6.2e-41 171.4 179 57.5
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 8.1e-41 171.0 180 58.3
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 8.1e-41 171.0 180 57.8
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.1e-40 170.6 163 61.3
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.1e-40 170.6 181 59.7
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.4e-40 170.2 136 69.9
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.3e-40 169.5 133 68.4
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 2.3e-40 169.5 165 59.4
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 2.3e-40 169.5 174 58.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.3e-40 169.5 136 65.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 5.2e-40 168.3 178 57.3
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.2e-40 168.3 178 57.3
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 8.9e-40 167.5 172 57.0
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.2e-39 167.2 103 80.6
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.5e-39 166.8 182 55.5
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.6e-39 166.0 183 56.3
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 4.4e-39 165.2 107 75.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 5.8e-39 164.9 174 58.0
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 9.9e-39 164.1 170 57.6
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.9e-38 162.5 168 58.9
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 5.1e-35 151.8 171 57.3
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 3.3e-34 149.1 136 58.8
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 3.1e-32 142.5 85 81.2
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.2e-31 140.6 128 57.8
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 4.9e-30 135.2 110 62.7
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 2.1e-28 129.8 170 47.1
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.7e-27 126.7 138 57.2
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 3.0e-27 125.9 119 56.3
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 3.9e-27 125.6 178 44.4
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 7.6e-23 111.3 157 42.7
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.2e-22 109.8 125 52.0
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.9e-22 108.6 119 47.1
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 1.3e-17 94.0 125 51.2
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.2e-15 87.4 97 54.6
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.2e-15 87.4 131 48.1


User provided reference genes

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