Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 1.2e-172 609.8 312 100.0
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 2.1e-145 519.2 279 95.0
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 3.0e-83 312.8 324 60.2
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 7.5e-82 308.1 324 59.6
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.7e-81 307.0 324 60.2
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 1.8e-80 303.5 325 59.4
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 1.2e-71 274.2 308 55.5
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 7.8e-71 271.6 317 53.9
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 3.9e-70 269.2 326 53.7
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 6.6e-70 268.5 318 54.1
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.5e-69 267.3 328 53.7
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 5.6e-69 265.4 318 52.8
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.8e-52 209.9 309 46.3
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 2.9e-49 199.9 318 44.0
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 8.4e-49 198.4 305 43.3
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 8.4e-49 198.4 330 43.0
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.9e-48 197.2 332 41.3
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 4.6e-47 192.6 330 42.1
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 7.8e-47 191.8 327 41.3
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 1.0e-46 191.4 309 41.4
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 5.1e-46 189.1 308 42.2
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 3.1e-43 179.9 323 36.8
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 1.2e-42 177.9 358 39.4
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 2.0e-42 177.2 133 78.9
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 2.6e-42 176.8 356 37.9
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.6e-39 167.5 279 46.2
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 7.8e-39 165.2 309 37.9
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.3e-38 164.5 300 35.7
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 3.0e-38 163.3 303 36.3
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 4.3e-37 159.5 306 35.9
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 5.6e-37 159.1 304 35.5
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 7.3e-37 158.7 301 35.2
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 7.3e-37 158.7 308 36.0
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 1.3e-36 157.9 307 35.8
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 1.6e-36 157.5 306 35.3
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 6.2e-36 155.6 301 35.5
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 6.2e-36 155.6 301 36.2
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.1e-35 154.8 296 35.1
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 2.4e-35 153.7 303 35.6
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 2.4e-35 153.7 298 35.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 3.1e-35 153.3 305 36.1
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 9.0e-35 151.8 277 40.1
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 1.2e-34 151.4 303 35.3
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.5e-34 151.0 306 35.6
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 2.0e-34 150.6 328 34.8
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 2.6e-34 150.2 293 34.1
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 3.4e-34 149.8 322 34.2
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 5.8e-34 149.1 301 36.2
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 5.8e-34 149.1 300 33.7
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 5.8e-34 149.1 287 32.8
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 9.9e-34 148.3 296 33.8
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.3e-33 147.9 300 35.3
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 1.7e-33 147.5 301 35.9
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 1.7e-33 147.5 309 34.6
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.9e-33 146.7 312 34.9
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 4.9e-33 146.0 287 35.2
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 6.4e-33 145.6 284 35.9
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 6.4e-33 145.6 301 33.2
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 8.4e-33 145.2 295 33.9
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.4e-33 145.2 299 34.4
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 1.4e-32 144.4 270 41.9
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.2e-32 142.9 306 35.0
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 5.4e-32 142.5 320 33.4
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 9.3e-32 141.7 283 36.4
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 9.3e-32 141.7 306 35.0
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.2e-31 141.4 301 32.9
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 2.1e-31 140.6 306 34.3
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 2.1e-31 140.6 306 35.0
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 2.1e-31 140.6 283 36.0
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 2.7e-31 140.2 305 32.5
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 3.5e-31 139.8 306 34.3
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 4.6e-31 139.4 302 31.1
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 6.0e-31 139.0 302 35.4
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 6.0e-31 139.0 284 36.3
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 6.0e-31 139.0 284 36.3
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.9e-31 138.7 312 35.3
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 2.3e-30 137.1 296 34.1
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 5.1e-30 136.0 294 33.7
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 5.6e-29 132.5 295 31.2
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 7.4e-29 132.1 300 33.7
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 3.7e-28 129.8 297 32.3
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 6.2e-28 129.0 286 31.5
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.2e-26 124.8 297 32.3
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 2.0e-26 124.0 274 33.2
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 2.0e-26 124.0 287 32.4
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 3.4e-26 123.2 302 30.1
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 5.8e-26 122.5 300 30.7
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 9.9e-26 121.7 283 34.3
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.3e-25 121.3 290 31.7
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.9e-24 117.5 306 31.0
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 2.7e-23 113.6 267 33.3
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.3e-22 111.3 73 63.0
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.8e-22 110.9 72 65.3
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 4.3e-21 106.3 73 60.3
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 5.6e-21 105.9 72 61.1
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 9.6e-21 105.1 71 62.0
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.3e-20 104.8 308 29.5
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.8e-19 100.9 295 30.5
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.8e-19 100.9 278 31.3
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 6.9e-19 99.0 70 64.3
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 6.9e-19 99.0 285 28.1
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 6.9e-19 99.0 277 29.2
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.5e-18 97.8 274 29.9
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 5.8e-18 95.9 298 27.5
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 7.6e-18 95.5 68 58.8
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 7.6e-18 95.5 82 76.8
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 4.9e-17 92.8 287 27.2
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 2.5e-16 90.5 264 29.5
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.2e-15 88.2 133 42.9
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 2.7e-15 87.0 137 43.8
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 3.5e-15 86.7 279 28.0
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 5.1e-14 82.8 132 39.4
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 6.7e-14 82.4 69 55.1
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 8.7e-14 82.0 262 28.2
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.5e-13 80.5 273 29.3
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 3.3e-13 80.1 61 55.7
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 5.7e-13 79.3 148 35.8
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 5.7e-13 79.3 66 57.6
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 3.7e-12 76.6 279 26.9
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.1e-11 73.6 117 40.2
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 4.1e-11 73.2 286 25.2
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.5e-10 71.2 103 39.8
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 3.6e-07 60.1 58 55.2
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 4.6e-07 59.7 57 49.1


User provided reference genes

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