Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p72670 Brassica napus HOM05D002637 ORTHO05D015500 1.1e-121 439.9 210 100.0
C04p72790 Brassica napus HOM05D002637 ORTHO05D015500 4.7e-64 248.4 215 60.9
BolC4t28760H Brassica oleracea HOM05D002637 ORTHO05D015500 5.2e-63 245.0 215 60.5
BcaB06g29411 Brassica carinata HOM05D002637 ORTHO05D015500 9.6e-57 224.2 207 58.9
A03p61900 Brassica napus HOM05D002637 ORTHO05D015500 2.8e-48 196.1 210 51.9
C04p71980 Brassica napus HOM05D002637 ORTHO05D015500 8.1e-48 194.5 174 60.3
A01p01530 Brassica napus HOM05D002637 ORTHO05D016052 5.8e-46 188.3 204 52.5
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 4.9e-45 185.3 204 51.5
C01p02860 Brassica napus HOM05D002637 ORTHO05D016052 1.9e-44 183.3 201 52.2
C01p02830 Brassica napus HOM05D002637 ORTHO05D016052 2.4e-44 183.0 201 51.7
BcaC02g06975 Brassica carinata HOM05D002637 ORTHO05D015500 4.2e-44 182.2 175 57.1
BcaNung00759 Brassica carinata HOM05D002637 ORTHO05D016052 6.7e-42 174.9 203 50.7
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 2.5e-41 172.9 220 47.7
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 4.3e-41 172.2 216 47.7
C01p02840 Brassica napus HOM05D002637 ORTHO05D016052 1.6e-40 170.2 220 46.4
C01p23540 Brassica napus HOM05D002637 ORTHO05D015500 2.8e-40 169.5 212 46.7
BolC1t00270H Brassica oleracea HOM05D002637 ORTHO05D016052 2.8e-40 169.5 220 46.4
BraA03t15227Z Brassica rapa HOM05D002637 ORTHO05D015500 5.3e-39 165.2 140 61.4
BolC4t28696H Brassica oleracea HOM05D002637 ORTHO05D015500 2.9e-37 159.5 133 61.7
BraSC79t46682Z Brassica rapa HOM05D002637 ORTHO05D107880 3.1e-31 139.4 66 97.0
BraSC79t46681Z Brassica rapa HOM05D002637 ORTHO05D015500 3.3e-25 119.4 62 93.5
A08p02290 Brassica napus HOM05D021878 ORTHO05D024469 1.4e-23 114.0 196 41.3
A04p34940 Brassica napus HOM05D002637 ORTHO05D015500 4.5e-22 109.0 84 66.7
BolC1t00272H Brassica oleracea HOM05D002637 ORTHO05D016052 2.9e-21 106.3 121 50.4
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 1.7e-16 90.5 208 35.6
BcaNung04685 Brassica carinata HOM05D033825 ORTHO05D011036 5.9e-14 82.0 201 33.3
AL3G38360 Arabidopsis lyrata HOM05D001636 ORTHO05D018456 7.7e-14 81.6 203 33.5
Carub.0005s2203 Capsella rubella HOM05D001636 ORTHO05D013186 1.3e-13 80.9 198 28.8
BcaC09g48422 Brassica carinata HOM05D021878 ORTHO05D024469 2.9e-13 79.7 72 55.6
Thhalv10024069m.g Eutrema salsugineum HOM05D001636 ORTHO05D009134 5.0e-13 79.0 213 31.9
Carub.0001s4175 Capsella rubella HOM05D001636 ORTHO05D013186 8.5e-13 78.2 208 28.8
Thhalv10019735m.g Eutrema salsugineum HOM05D001456 ORTHO05D009134 1.4e-12 77.4 150 36.7
Carub.0008s0675 Capsella rubella HOM05D001636 ORTHO05D013186 2.5e-12 76.6 209 31.1
A04p34930 Brassica napus HOM05D002637 ORTHO05D016052 3.2e-12 76.3 46 71.7
Thhalv10000121m.g Eutrema salsugineum HOM05D001636 ORTHO05D009134 7.2e-12 75.1 200 30.0
AL7G41400 Arabidopsis lyrata HOM05D008913 ORTHO05D011317 2.7e-11 73.2 219 32.4
A02p42600 Brassica napus HOM05D001636 ORTHO05D009134 4.7e-11 72.4 207 30.4
AL1G11090 Arabidopsis lyrata HOM05D001456 ORTHO05D011036 1.0e-10 71.2 161 35.4
BraA05t18996Z Brassica rapa HOM05D001636 ORTHO05D018456 1.0e-10 71.2 199 31.7
BcaC09g52273 Brassica carinata HOM05D001636 ORTHO05D009134 3.0e-10 69.7 206 29.1
Carub.0007s3262 Capsella rubella HOM05D001636 ORTHO05D011036 3.0e-10 69.7 205 28.8
BraA01t04560Z Brassica rapa HOM05D001636 ORTHO05D033589 3.9e-10 69.3 210 29.0
BcaC03g18185 Brassica carinata HOM05D001636 ORTHO05D009134 8.8e-10 68.2 212 29.2
Carub.0006s0379 Capsella rubella HOM05D001636 ORTHO05D009134 8.8e-10 68.2 214 30.4
Carub.0008s0517 Capsella rubella HOM05D001636 ORTHO05D013186 2.0e-09 67.0 189 28.6
BcaB02g09846 Brassica carinata HOM05D001165 ORTHO05D001347 2.6e-09 66.6 198 27.3
C04p00350 Brassica napus HOM05D001636 ORTHO05D018456 3.3e-09 66.2 99 44.4
BolC4t21677H Brassica oleracea HOM05D001636 ORTHO05D018456 3.3e-09 66.2 99 44.4
A07p35040 Brassica napus HOM05D001636 ORTHO05D009134 4.4e-09 65.9 206 28.6
AL5G10320 Arabidopsis lyrata HOM05D001456 ORTHO05D001571 5.7e-09 65.5 197 27.4
AL9U10980 Arabidopsis lyrata HOM05D062308 ORTHO05D009134 5.7e-09 65.5 189 28.6
BcaC02g12800 Brassica carinata HOM05D001636 ORTHO05D018456 5.7e-09 65.5 110 41.8
BNapus_Darmor_BZH_scaffold_188p00110 Brassica napus HOM05D001636 ORTHO05D018456 5.7e-09 65.5 110 41.8
BolC1t02221H Brassica oleracea HOM05D001636 ORTHO05D009134 1.3e-08 64.3 150 32.7
Carub.0001s0454 Capsella rubella HOM05D001636 ORTHO05D013186 1.3e-08 64.3 71 46.5
BolSC55t61225H Brassica oleracea HOM05D001636 ORTHO05D018456 1.7e-08 63.9 110 40.9
BraA06t25197Z Brassica rapa HOM05D001636 ORTHO05D024225 2.2e-08 63.5 210 29.5
AL1G15310 Arabidopsis lyrata HOM05D001636 ORTHO05D011036 3.7e-08 62.8 209 27.8
BcaC02g09571 Brassica carinata HOM05D001636 ORTHO05D024225 3.7e-08 62.8 160 29.4
BolC4t26000H Brassica oleracea HOM05D001636 ORTHO05D024225 3.7e-08 62.8 160 29.4
A01p18890 Brassica napus HOM05D006174 ORTHO05D007987 4.8e-08 62.4 214 29.4
BolC2t11826H Brassica oleracea HOM05D001636 ORTHO05D009134 4.8e-08 62.4 197 28.9
BraA01t01830Z Brassica rapa HOM05D006174 ORTHO05D007987 4.8e-08 62.4 214 29.4
C07p43040 Brassica napus HOM05D001636 ORTHO05D009134 8.2e-08 61.6 207 26.1
BcaC02g12798 Brassica carinata HOM05D001636 ORTHO05D018456 1.1e-07 61.2 106 41.5
BcaB07g31709 Brassica carinata HOM05D008913 ORTHO05D011317 1.4e-07 60.8 205 27.8
C09p57360 Brassica napus HOM05D001636 ORTHO05D009134 1.4e-07 60.8 207 29.0
Carub.0002s1385 Capsella rubella HOM05D001636 ORTHO05D009134 1.4e-07 60.8 198 28.8
AL4G13470 Arabidopsis lyrata HOM05D001636 ORTHO05D011036 1.8e-07 60.5 96 36.5
BolC6t39302H Brassica oleracea HOM05D001636 ORTHO05D009134 1.8e-07 60.5 196 28.1
CARHR179320 Cardamine hirsuta HOM05D001456 ORTHO05D011036 1.8e-07 60.5 71 45.1
AL5G21850 Arabidopsis lyrata HOM05D001456 ORTHO05D011036 2.4e-07 60.1 193 27.5
AL6G52880 Arabidopsis lyrata HOM05D001636 ORTHO05D013186 2.4e-07 60.1 98 37.8
BcaB02g09721 Brassica carinata HOM05D001636 ORTHO05D009134 2.4e-07 60.1 151 31.1
Thhalv10005934m.g Eutrema salsugineum HOM05D001636 ORTHO05D009134 2.4e-07 60.1 201 29.4
BcaB06g29167 Brassica carinata HOM05D001636 ORTHO05D009134 3.1e-07 59.7 71 43.7
BolC7t44832H Brassica oleracea HOM05D001636 ORTHO05D009134 3.1e-07 59.7 212 25.0
Carub.0001s0130 Capsella rubella HOM05D001456 ORTHO05D009134 3.1e-07 59.7 105 34.3
Carub.0002s0629 Capsella rubella HOM05D001636 ORTHO05D013186 3.1e-07 59.7 97 38.1
BolC3t16817H Brassica oleracea HOM05D001636 ORTHO05D009134 4.1e-07 59.3 197 25.9
BolC9t58608H Brassica oleracea HOM05D001636 ORTHO05D009134 4.1e-07 59.3 198 29.3
Carub.0007s3606 Capsella rubella HOM05D001456 ORTHO05D011036 4.1e-07 59.3 115 38.3
Thhalv10017693m.g Eutrema salsugineum HOM05D001456 ORTHO05D011317 4.1e-07 59.3 159 34.6
BcaB08g35996 Brassica carinata HOM05D011861 ORTHO05D027663 5.3e-07 58.9 75 46.7
BcaC02g09873 Brassica carinata HOM05D001456 ORTHO05D032772 5.3e-07 58.9 73 45.2
BolC4t25235H Brassica oleracea HOM05D001456 ORTHO05D011036 5.3e-07 58.9 73 45.2
C01p23810 Brassica napus HOM05D001636 ORTHO05D040027 7.0e-07 58.5 102 37.3
AL3G40410 Arabidopsis lyrata HOM05D001636 ORTHO05D009134 9.1e-07 58.2 207 30.4
BcaB03g15112 Brassica carinata HOM05D001636 ORTHO05D009134 9.1e-07 58.2 96 37.5
BcaB07g32632 Brassica carinata HOM05D001456 ORTHO05D011036 9.1e-07 58.2 69 49.3
BraA02t09188Z Brassica rapa HOM05D001636 ORTHO05D009134 9.1e-07 58.2 201 27.9
BcaC03g18165 Brassica carinata HOM05D001636 ORTHO05D009134 1.2e-06 57.8 197 29.4
BcaC07g40712 Brassica carinata HOM05D001456 ORTHO05D002799 1.2e-06 57.8 180 27.8
A09p54270 Brassica napus HOM05D001456 ORTHO05D002799 1.2e-06 57.8 180 27.8
C02p62340 Brassica napus HOM05D001636 ORTHO05D009134 1.2e-06 57.8 197 29.4
C08p37150 Brassica napus HOM05D001456 ORTHO05D002799 1.2e-06 57.8 180 27.8
BolC8t51292H Brassica oleracea HOM05D001456 ORTHO05D002799 1.2e-06 57.8 180 27.8
BraA09t40839Z Brassica rapa HOM05D001456 ORTHO05D002799 1.2e-06 57.8 180 27.8
BcaNung02002 Brassica carinata HOM05D001636 ORTHO05D009134 1.5e-06 57.4 206 25.2
BcaC01g04096 Brassica carinata HOM05D001636 ORTHO05D009134 2.0e-06 57.0 197 25.4
C05p29980 Brassica napus HOM05D001636 ORTHO05D027512 2.0e-06 57.0 68 47.1
BolC5t31733H Brassica oleracea HOM05D001636 ORTHO05D027512 2.0e-06 57.0 68 47.1
DCAR_001416 Daucus carota HOM05D004262 ORTHO05D004886 2.0e-06 57.0 150 30.0
A04p34900 Brassica napus HOM05D002637 ORTHO05D097556 2.6e-06 56.6 27 88.9
Carub.0006s3667 Capsella rubella HOM05D001636 ORTHO05D013186 2.6e-06 56.6 151 30.5
Sp2g24420 Schrenkiella parvula HOM05D001456 ORTHO05D002799 2.6e-06 56.6 145 31.7
BcaC03g14332 Brassica carinata HOM05D001636 ORTHO05D009134 3.5e-06 56.2 200 27.5
BcaC09g47755 Brassica carinata HOM05D001636 ORTHO05D039559 3.5e-06 56.2 102 33.3
BraA06t26475Z Brassica rapa HOM05D001636 ORTHO05D009134 3.5e-06 56.2 214 24.3
AL1G16270 Arabidopsis lyrata HOM05D001456 ORTHO05D011036 4.5e-06 55.8 95 36.8
AL1G17090 Arabidopsis lyrata HOM05D001456 ORTHO05D013186 4.5e-06 55.8 94 37.2
C01p33890 Brassica napus HOM05D001636 ORTHO05D009134 4.5e-06 55.8 215 26.0
C06p31460 Brassica napus HOM05D001456 ORTHO05D011036 4.5e-06 55.8 110 36.4
BolC1t03356H Brassica oleracea HOM05D001636 ORTHO05D009134 4.5e-06 55.8 69 42.0
BraA06t23916Z Brassica rapa HOM05D008913 ORTHO05D011317 4.5e-06 55.8 207 26.6
AL1G14200 Arabidopsis lyrata HOM05D001636 ORTHO05D013186 5.9e-06 55.5 116 37.1
BcaC08g46306 Brassica carinata HOM05D001636 ORTHO05D009134 5.9e-06 55.5 192 27.6
A01p41350 Brassica napus HOM05D001636 ORTHO05D033589 5.9e-06 55.5 102 32.4
BNapus_Darmor_BZH_scaffold_78p00360 Brassica napus HOM05D001636 ORTHO05D033589 5.9e-06 55.5 102 32.4
BolC6t39297H Brassica oleracea HOM05D001636 ORTHO05D009134 5.9e-06 55.5 190 27.9
BraA03t14586Z Brassica rapa HOM05D001636 ORTHO05D009134 5.9e-06 55.5 199 28.6
Thhalv10017769m.g Eutrema salsugineum HOM05D001456 ORTHO05D011036 5.9e-06 55.5 77 44.2
C04p70100 Brassica napus HOM05D001636 ORTHO05D009134 7.7e-06 55.1 202 28.2
BolSC55t61220H Brassica oleracea HOM05D001636 ORTHO05D011036 7.7e-06 55.1 48 58.3


User provided reference genes

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