Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p71580 Brassica napus HOM05D003683 ORTHO05D004143 7.0e-66 253.8 131 100.0
BolC4t28663H Brassica oleracea HOM05D003683 ORTHO05D004143 7.0e-66 253.8 131 100.0
BcaC02g07091 Brassica carinata HOM05D003683 ORTHO05D004143 3.8e-43 178.3 93 100.0
A04p33850 Brassica napus HOM05D003683 ORTHO05D004143 6.0e-41 171.0 93 94.6
BraA04t18845Z Brassica rapa HOM05D003683 ORTHO05D004143 6.0e-41 171.0 93 94.6
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 2.4e-37 159.1 100 81.0
BcaB06g29422 Brassica carinata HOM05D003683 ORTHO05D004143 4.4e-36 154.8 93 87.1
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 1.3e-35 153.3 93 84.9
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 1.3e-35 153.3 93 84.9
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 1.7e-35 152.9 93 84.9
C03p30100 Brassica napus HOM05D003683 ORTHO05D004143 3.8e-35 151.8 93 83.9
BcaB01g03267 Brassica carinata HOM05D003683 ORTHO05D004143 4.9e-35 151.4 93 82.8
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 4.9e-35 151.4 93 83.9
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 4.9e-35 151.4 93 83.9
BcaC01g05122 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-34 150.2 93 82.8
BcaC01g05135 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-34 150.2 93 82.8
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 1.9e-34 149.4 93 82.8
A03p25230 Brassica napus HOM05D003683 ORTHO05D004143 1.6e-33 146.4 93 82.8
BcaB02g08986 Brassica carinata HOM05D003683 ORTHO05D004143 2.1e-33 146.0 86 86.0
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 7.9e-33 144.1 93 80.6
AL4G44620 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 2.3e-32 142.5 93 78.5
CARHR140640 Cardamine hirsuta HOM05D003683 ORTHO05D004143 3.9e-32 141.7 93 77.4
AT2G45450 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 5.1e-32 141.4 113 67.3
Carub.0004s2806 Capsella rubella HOM05D003683 ORTHO05D004143 1.6e-30 136.3 94 75.5
Aa31LG1G26950 Aethionema arabicum HOM05D003683 ORTHO05D004143 2.1e-22 109.4 101 62.4
Sp5g02360 Schrenkiella parvula HOM05D003683 ORTHO05D004143 2.1e-14 82.8 98 52.0
BcaB02g07396 Brassica carinata HOM05D003683 ORTHO05D004143 1.4e-13 80.1 101 51.5
Thhalv10006309m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 3.1e-13 79.0 94 52.1
AT3G60890 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 4.1e-13 78.6 95 49.5
A04p01350 Brassica napus HOM05D003683 ORTHO05D004143 4.1e-13 78.6 89 51.7
CARHR171270 Cardamine hirsuta HOM05D003683 ORTHO05D004143 6.9e-13 77.8 86 47.7
AL5G43210 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 2.0e-12 76.3 95 48.4
A07p25250 Brassica napus HOM05D003683 ORTHO05D004143 2.0e-12 76.3 91 48.4
BraA07t30167Z Brassica rapa HOM05D003683 ORTHO05D004143 2.0e-12 76.3 91 47.3
BcaC02g10196 Brassica carinata HOM05D003683 ORTHO05D004143 5.9e-12 74.7 91 50.5
Carub.0005s2764 Capsella rubella HOM05D003683 ORTHO05D004143 1.7e-11 73.2 96 50.0
C06p26960 Brassica napus HOM05D003683 ORTHO05D004143 2.9e-11 72.4 100 44.0
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 2.9e-11 72.4 97 44.3
BcaC08g45090 Brassica carinata HOM05D003683 ORTHO05D004143 2.5e-10 69.3 89 43.8
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 7.2e-10 67.8 92 44.6
C04p31700 Brassica napus HOM05D003683 ORTHO05D004143 9.3e-10 67.4 102 44.1
BolC6t37870H Brassica oleracea HOM05D003683 ORTHO05D004143 9.3e-10 67.4 102 43.1
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 1.2e-09 67.0 92 44.6
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-09 67.0 92 44.6
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-09 67.0 92 44.6
THA.LOC104801993 Tarenaya hassleriana HOM05D003683 ORTHO05D004143 1.2e-09 67.0 103 45.6
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 1.6e-09 66.6 69 55.1
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 6.1e-09 64.7 73 50.7
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.9e-09 64.3 73 49.3
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 1.0e-08 63.9 99 42.4
CsaV3_3G009560 Cucumis sativus L. HOM05D003683 ORTHO05D004143 1.0e-08 63.9 91 46.2
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.3e-08 63.5 77 48.1
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.3e-08 63.5 61 52.5
COL.COLO4_23839 Corchorus olitorius HOM05D003683 ORTHO05D004143 1.3e-08 63.5 87 46.0
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.3e-08 63.5 92 44.6
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.3e-08 63.5 95 42.1
Lsat_1_v5_gn_6_10220 Lactuca sativa HOM05D003683 ORTHO05D004143 1.8e-08 63.2 103 40.8
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 1.8e-08 63.2 68 51.5
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 1.8e-08 63.2 92 44.6
GSVIVG01019925001 Vitis vinifera HOM05D003683 ORTHO05D004143 1.8e-08 63.2 87 43.7
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 2.3e-08 62.8 86 48.8
Medtr7g075120 Medicago truncatula HOM05D003683 ORTHO05D004143 2.3e-08 62.8 62 48.4
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 3.0e-08 62.4 82 45.1
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 3.0e-08 62.4 44 70.5
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 3.0e-08 62.4 102 41.2
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 3.9e-08 62.0 97 41.2
CSS0019244 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 5.1e-08 61.6 91 41.8
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 5.1e-08 61.6 91 42.9
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 5.1e-08 61.6 79 44.3
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 5.1e-08 61.6 101 43.6
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 6.7e-08 61.2 93 43.0
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 6.7e-08 61.2 47 63.8
BolC4t24719H Brassica oleracea HOM05D003683 ORTHO05D004143 8.7e-08 60.8 47 66.0
BraA04t15855Z Brassica rapa HOM05D003683 ORTHO05D004143 8.7e-08 60.8 47 66.0
Migut.E01009 Erythranthe guttata HOM05D003683 ORTHO05D004143 8.7e-08 60.8 67 56.7
Gohir.A12G222400 Gossypium hirsutum HOM05D003683 ORTHO05D004143 8.7e-08 60.8 61 54.1
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 8.7e-08 60.8 73 52.1
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 8.7e-08 60.8 97 40.2
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 8.7e-08 60.8 65 53.8
Thecc.03G264300 Theobroma cacao HOM05D003683 ORTHO05D004143 8.7e-08 60.8 114 41.2
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 1.1e-07 60.5 44 65.9
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 1.1e-07 60.5 61 52.5
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.1e-07 60.5 88 40.9
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.1e-07 60.5 88 40.9
BcaC08g45089 Brassica carinata HOM05D003683 ORTHO05D004143 1.5e-07 60.1 102 41.2
Ciclev10023705m.g Citrus clementina HOM05D003683 ORTHO05D004143 1.5e-07 60.1 107 38.3
Manes.01G071300 Manihot esculenta HOM05D003683 ORTHO05D004143 1.5e-07 60.1 61 54.1
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 1.9e-07 59.7 57 59.6
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 2.5e-07 59.3 93 43.0
FAN01G1734 Fragaria x ananassa HOM05D003683 ORTHO05D004143 2.5e-07 59.3 92 42.4
Gorai.008G241000 Gossypium raimondii HOM05D003683 ORTHO05D004143 2.5e-07 59.3 61 55.7
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 2.5e-07 59.3 104 37.5
Cc08_g13490 Coffea canephora HOM05D003683 ORTHO05D004143 3.3e-07 58.9 88 42.0
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 3.3e-07 58.9 92 42.4
ECA233G3941 Erigeron canadensis HOM05D003683 ORTHO05D004143 3.3e-07 58.9 72 44.4
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 3.3e-07 58.9 88 45.5
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 3.3e-07 58.9 89 40.4
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 3.3e-07 58.9 93 39.8
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 4.3e-07 58.5 94 38.3
Gohir.D03G159600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 5.7e-07 58.2 88 44.3
Gorai.003G167900 Gossypium raimondii HOM05D003683 ORTHO05D004143 5.7e-07 58.2 88 44.3
MD07G1124000 Malus domestica HOM05D003683 ORTHO05D004143 5.7e-07 58.2 48 60.4
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 5.7e-07 58.2 92 43.5
HanXRQChr17g0557021 Helianthus annuus HOM05D003683 ORTHO05D004143 7.4e-07 57.8 94 40.4
Peaxi162Scf00102g01336 Petunia axillaris HOM05D003683 ORTHO05D004143 7.4e-07 57.8 94 39.4
SalBow6G6235 Salvia bowleyana HOM05D003683 ORTHO05D004143 7.4e-07 57.8 75 49.3
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 7.4e-07 57.8 46 67.4
Atru.chr9.1472 Acer truncatum HOM05D003683 ORTHO05D004143 9.7e-07 57.4 86 46.5
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 9.7e-07 57.4 93 38.7
Lsat_1_v5_gn_4_37980 Lactuca sativa HOM05D003683 ORTHO05D004143 9.7e-07 57.4 105 36.2
QL12p015617 Quercus lobata HOM05D003683 ORTHO05D004143 9.7e-07 57.4 64 51.6
ClCG01G003480 Citrullus lanatus HOM05D003683 ORTHO05D004143 1.3e-06 57.0 61 50.8
HanXRQChr09g0246651 Helianthus annuus HOM05D003683 ORTHO05D004143 1.3e-06 57.0 99 39.4
Sabra01G0087900 Salix brachista HOM05D003683 ORTHO05D004143 1.3e-06 57.0 63 49.2
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.6e-06 56.6 103 35.9
CsaV3_5G003580 Cucumis sativus L. HOM05D003683 ORTHO05D004143 1.6e-06 56.6 55 58.2
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 1.6e-06 56.6 44 61.4
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.6e-06 56.6 87 41.4
TWI60G0451 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 1.6e-06 56.6 61 49.2
MELO3C006178.2 Cucumis melo HOM05D003683 ORTHO05D004143 2.2e-06 56.2 92 44.6
DCAR_008443 Daucus carota HOM05D003683 ORTHO05D004143 2.2e-06 56.2 102 38.2
Eucgr.E00491 Eucalyptus grandis HOM05D003683 ORTHO05D004143 2.2e-06 56.2 63 50.8
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 2.2e-06 56.2 55 58.2
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 2.2e-06 56.2 93 38.7
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 2.2e-06 56.2 101 38.6
TAR375G1063 Trochodendron aralioides HOM05D003683 ORTHO05D004143 2.2e-06 56.2 95 37.9
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 2.8e-06 55.8 69 47.8
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 2.8e-06 55.8 46 63.0
Phvul.008G075300 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 2.8e-06 55.8 71 45.1
Actinidia14483 Actinidia chinensis HOM05D003683 ORTHO05D004143 3.7e-06 55.5 94 40.4
Phvul.010G085600 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 3.7e-06 55.5 99 40.4
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 3.7e-06 55.5 68 45.6
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 3.7e-06 55.5 99 36.4
VMungo1383G1500 Vigna mungo HOM05D003683 ORTHO05D004143 3.7e-06 55.5 71 45.1
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 4.8e-06 55.1 76 42.1
MBI04_g32262_MAGBIO Magnolia biondii HOM05D003683 ORTHO05D004143 4.8e-06 55.1 93 39.8
PGR042G1830 Punica granatum HOM05D003683 ORTHO05D004143 4.8e-06 55.1 71 47.9
Sabra03G0081600 Salix brachista HOM05D003683 ORTHO05D004143 4.8e-06 55.1 63 49.2
ATR0810G009 Amborella trichopoda HOM05D003683 ORTHO05D004143 6.3e-06 54.7 85 47.1
Gohir.D12G224900 Gossypium hirsutum HOM05D003683 ORTHO05D004143 6.3e-06 54.7 61 52.5
HanXRQChr16g0521651 Helianthus annuus HOM05D003683 ORTHO05D004143 6.3e-06 54.7 102 36.3
Sed0005281 Sechium edule HOM05D003683 ORTHO05D004143 6.3e-06 54.7 63 49.2
CiPaw.11G145300 Carya illinoinensis HOM05D003683 ORTHO05D004143 8.2e-06 54.3 55 50.9
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 8.2e-06 54.3 79 43.0
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 8.2e-06 54.3 67 43.3
Sed0004645 Sechium edule HOM05D003683 ORTHO05D004143 8.2e-06 54.3 94 39.4
Hund14673 Selenicereus undatus HOM05D003683 ORTHO05D004143 8.2e-06 54.3 92 40.2
vmacro00217 Vaccinium macrocarpon HOM05D003683 ORTHO05D004143 8.2e-06 54.3 66 50.0


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