Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.1e-173 613.2 311 100.0
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.1e-173 613.2 311 100.0
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.7e-158 562.8 313 93.3
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 7.8e-156 553.9 311 90.4
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 3.6e-153 545.0 311 90.4
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.6e-148 529.6 311 87.8
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 3.0e-131 472.2 338 75.1
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.5e-124 448.7 334 71.9
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.0e-123 447.2 328 72.6
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 7.4e-122 441.0 347 68.0
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 2.8e-121 439.1 331 71.9
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 2.4e-120 436.0 319 73.0
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.4e-111 405.6 298 73.2
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 2.1e-108 396.4 329 64.7
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.6e-100 370.2 322 59.9
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 4.7e-100 368.6 322 59.6
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.4e-99 367.1 322 59.9
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 6.7e-99 364.8 329 57.8
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 7.4e-98 361.3 332 56.3
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.8e-96 356.7 325 58.5
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 4.1e-96 355.5 322 57.1
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 7.0e-96 354.8 332 57.5
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 9.1e-96 354.4 333 55.9
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 3.5e-95 352.4 322 57.1
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 5.9e-95 351.7 345 54.2
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 7.7e-95 351.3 332 57.5
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.7e-94 350.1 313 56.5
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.5e-93 347.1 326 56.4
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.5e-93 346.3 329 55.9
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.5e-93 346.3 329 55.9
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 3.2e-93 345.9 311 57.6
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 5.5e-93 345.1 333 57.1
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 1.2e-92 344.0 319 56.1
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.2e-92 344.0 326 55.2
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 6.1e-92 341.7 327 54.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 8.0e-92 341.3 332 55.1
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.0e-91 340.9 330 53.9
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.4e-91 340.5 331 55.6
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.8e-91 340.1 330 55.2
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.3e-91 339.7 326 54.0
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 6.7e-91 338.2 324 56.5
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 6.7e-91 338.2 323 55.1
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.1e-90 337.4 331 55.3
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.5e-90 337.0 322 55.9
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.5e-90 337.0 333 55.3
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 2.6e-90 336.3 319 55.2
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.3e-90 335.9 329 54.4
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 4.4e-90 335.5 325 55.7
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 7.4e-90 334.7 331 55.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 9.7e-90 334.3 331 55.0
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 1.3e-89 334.0 333 52.9
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 2.2e-89 333.2 318 55.3
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.2e-89 333.2 330 53.6
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 3.7e-89 332.4 333 54.1
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 6.3e-89 331.6 331 54.7
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 3.1e-88 329.3 326 54.3
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 4.1e-88 328.9 331 53.5
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 4.1e-88 328.9 331 54.7
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.0e-88 328.2 325 53.8
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 7.0e-88 328.2 321 53.3
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.2e-87 327.4 317 57.1
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 1.6e-87 327.0 326 54.6
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 4.5e-87 325.5 331 54.1
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.7e-86 323.6 332 53.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.7e-86 323.6 332 53.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 2.9e-86 322.8 330 52.4
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 6.5e-86 321.6 329 52.3
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.9e-85 320.1 330 52.4
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 5.5e-85 318.5 330 53.6
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.2e-84 317.4 319 51.1
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.6e-84 317.0 275 57.8
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 2.1e-84 316.6 322 55.0
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 3.6e-84 315.8 332 52.1
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 4.7e-84 315.5 330 52.7
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 4.7e-84 315.5 320 53.4
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 8.0e-84 314.7 318 52.5
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.5e-82 310.5 333 51.7
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.0e-82 310.1 321 48.9
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 2.2e-81 306.6 321 50.8
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 3.7e-81 305.8 300 53.7
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 8.3e-81 304.7 323 48.6
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 9.1e-80 301.2 334 48.2
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 4.5e-79 298.9 303 53.1
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.5e-77 293.9 317 50.2
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 4.0e-75 285.8 285 52.6
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 1.2e-74 284.3 334 47.3
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 5.7e-74 282.0 377 44.8
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 2.2e-73 280.0 326 48.2
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 2.4e-72 276.6 331 46.5
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 3.1e-72 276.2 337 48.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 3.1e-72 276.2 321 51.1
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.3e-70 270.0 326 48.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 5.5e-69 265.4 270 53.7
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 3.4e-66 256.1 262 50.4
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 9.2e-64 248.1 317 44.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.1e-61 241.1 329 41.6
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.0e-59 234.6 252 54.0
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.8e-59 233.8 358 39.7
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 5.2e-59 232.3 340 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 2.4e-56 223.4 335 40.3
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 3.1e-51 206.5 317 38.5
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 4.4e-50 202.6 181 60.8
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 7.1e-48 195.3 390 34.6
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.7e-46 190.7 389 34.2
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.8e-44 183.3 209 49.8
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 3.2e-40 169.9 134 63.4
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.4e-35 154.5 133 60.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.4e-32 144.4 148 51.4
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 4.2e-32 142.9 121 62.0
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 1.3e-30 137.9 320 29.4
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.3e-30 137.1 119 61.3
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.5e-29 133.7 119 54.6
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 8.1e-28 128.6 200 38.0
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.0e-27 126.3 134 50.7
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 2.3e-22 110.5 108 51.9
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 8.7e-22 108.6 87 59.8
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.5e-21 107.8 96 53.1
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 2.9e-17 93.6 321 27.1
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 7.1e-16 89.0 144 41.0
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.1e-15 87.4 69 65.2
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.3e-14 84.0 79 55.7
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.4e-11 74.7 109 41.3
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.2e-10 71.6 136 36.8
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 1.7e-09 67.8 56 58.9


User provided reference genes

Program Settings