Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 5.9e-73 277.7 171 100.0
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 5.2e-69 264.6 171 95.9
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 5.2e-69 264.6 171 95.9
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 1.5e-68 263.1 171 80.1
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 7.5e-68 260.8 171 94.2
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 9.8e-68 260.4 171 94.7
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 1.6e-65 253.1 171 93.6
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 3.0e-64 248.8 171 91.2
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 5.0e-64 248.1 171 90.1
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 5.6e-63 244.6 172 91.9
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 1.2e-62 243.4 171 91.8
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 4.0e-61 238.4 166 94.0
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 1.2e-60 236.9 172 90.1
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 2.3e-24 116.3 173 46.2
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 8.7e-24 114.4 172 45.9
BolC1t05719H Brassica oleracea HOM05D000205 ORTHO05D000438 1.1e-23 114.0 89 95.5
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 5.3e-21 105.1 172 43.6
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 5.3e-21 105.1 96 62.5
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 9.0e-21 104.4 94 61.7
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 9.0e-21 104.4 94 61.7
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 2.0e-20 103.2 94 60.6
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 3.4e-20 102.4 96 61.5
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 1.0e-19 100.9 96 61.5
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.0e-19 100.9 185 41.6
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 1.3e-19 100.5 94 61.7
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 2.2e-19 99.8 96 61.5
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 3.8e-19 99.0 170 45.3
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.1e-18 97.4 181 40.3
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.4e-18 97.1 96 59.4
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.4e-18 97.1 96 59.4
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 2.5e-18 96.3 93 63.4
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 2.5e-18 96.3 93 63.4
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 5.5e-18 95.1 93 60.2
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 5.5e-18 95.1 182 41.8
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 9.3e-18 94.4 96 60.4
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 9.3e-18 94.4 96 60.4
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 1.2e-17 94.0 181 39.8
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 2.7e-17 92.8 91 60.4
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 2.7e-17 92.8 96 58.3
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 3.5e-17 92.4 94 58.5
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 7.9e-17 91.3 93 62.4
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 1.0e-16 90.9 182 41.2
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.3e-16 90.5 93 58.1
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 2.3e-16 89.7 93 58.1
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 3.0e-16 89.4 93 57.0
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 5.1e-16 88.6 161 44.1
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 5.1e-16 88.6 161 44.1
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 8.7e-16 87.8 93 60.2
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 1.1e-15 87.4 96 56.2
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 1.1e-15 87.4 93 60.2
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 1.1e-15 87.4 96 56.2
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 1.5e-15 87.0 93 55.9
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 1.9e-15 86.7 167 38.3
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 1.9e-15 86.7 167 38.3
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 2.5e-15 86.3 93 55.9
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 3.3e-15 85.9 97 53.6
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 3.3e-15 85.9 93 55.9
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 5.7e-15 85.1 169 40.2
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 5.7e-15 85.1 88 60.2
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 5.7e-15 85.1 175 39.4
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 9.6e-15 84.3 168 39.3
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 1.3e-14 84.0 173 39.9
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 1.6e-14 83.6 142 42.3
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 1.6e-14 83.6 93 54.8
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 1.6e-14 83.6 94 54.3
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 1.6e-14 83.6 142 42.3
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 2.1e-14 83.2 165 40.6
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 2.1e-14 83.2 95 53.7
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 2.8e-14 82.8 161 38.5
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 3.7e-14 82.4 157 42.0
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 3.7e-14 82.4 157 42.0
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 4.8e-14 82.0 93 60.2
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 4.8e-14 82.0 167 40.7
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 8.2e-14 81.3 98 52.0
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 2.4e-13 79.7 173 39.9
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 3.1e-13 79.3 93 58.1
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 3.1e-13 79.3 97 54.6
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 4.1e-13 79.0 91 54.9
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 5.3e-13 78.6 163 41.7
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 5.3e-13 78.6 163 41.7
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 6.9e-13 78.2 98 51.0
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 6.9e-13 78.2 169 40.8
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 9.0e-13 77.8 92 53.3
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 9.0e-13 77.8 169 39.1
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 1.2e-12 77.4 173 37.0
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 1.2e-12 77.4 173 37.0
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 1.5e-12 77.0 148 38.5
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 1.5e-12 77.0 92 56.5
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 1.5e-12 77.0 169 40.2
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 2.0e-12 76.6 166 38.0
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 2.6e-12 76.3 72 62.5
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 3.4e-12 75.9 163 39.9
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 3.4e-12 75.9 143 42.0
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 3.4e-12 75.9 87 57.5
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 4.5e-12 75.5 93 58.1
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 4.5e-12 75.5 81 56.8
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 4.5e-12 75.5 81 56.8
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 4.5e-12 75.5 87 57.5
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 4.5e-12 75.5 163 41.1
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 4.5e-12 75.5 81 56.8
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 7.6e-12 74.7 90 52.2
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 7.6e-12 74.7 97 53.6
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 7.6e-12 74.7 87 55.2
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 7.6e-12 74.7 90 52.2
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.0e-11 74.3 98 51.0
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 1.3e-11 73.9 98 49.0
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 1.3e-11 73.9 98 49.0
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 1.7e-11 73.6 94 48.9
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 1.7e-11 73.6 142 41.5
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 1.7e-11 73.6 81 56.8
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 1.7e-11 73.6 98 50.0
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 2.2e-11 73.2 97 51.5
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 2.9e-11 72.8 92 47.8
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 2.9e-11 72.8 90 52.2
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 5.0e-11 72.0 83 56.6
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 6.5e-11 71.6 164 37.8
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 6.5e-11 71.6 81 54.3
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 1.1e-10 70.9 97 50.5
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.1e-10 70.9 172 36.0
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 1.1e-10 70.9 167 38.3
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 1.4e-10 70.5 81 56.8
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 1.4e-10 70.5 97 50.5
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 1.4e-10 70.5 97 50.5
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 1.9e-10 70.1 97 51.5
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 1.9e-10 70.1 161 39.8
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 2.5e-10 69.7 98 45.9
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 2.5e-10 69.7 72 63.9
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 3.2e-10 69.3 71 59.2
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 3.2e-10 69.3 83 55.4
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 5.5e-10 68.6 73 57.5
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 5.5e-10 68.6 160 36.9
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 5.5e-10 68.6 81 55.6
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 7.1e-10 68.2 76 53.9
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 7.1e-10 68.2 81 55.6
C08p50480 Brassica napus HOM05D003240 ORTHO05D101800 7.1e-10 68.2 60 66.7
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 9.3e-10 67.8 92 48.9
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 1.6e-09 67.0 163 39.9
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 2.1e-09 66.6 131 40.5
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 2.7e-09 66.2 98 48.0
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 3.5e-09 65.9 86 51.2
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 4.6e-09 65.5 98 48.0
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 6.1e-09 65.1 87 46.0
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 6.1e-09 65.1 98 48.0
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 1.0e-08 64.3 98 46.9
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 1.3e-08 63.9 177 33.9
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 2.3e-08 63.2 83 51.8
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 3.9e-08 62.4 61 60.7
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 3.9e-08 62.4 80 52.5
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 3.9e-08 62.4 61 60.7
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 5.1e-08 62.0 98 46.9
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 5.1e-08 62.0 177 33.9
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 5.1e-08 62.0 177 33.9
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 6.7e-08 61.6 140 40.0
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 6.7e-08 61.6 51 68.6
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 1.1e-07 60.8 73 52.1
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 1.9e-07 60.1 146 39.0
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 1.9e-07 60.1 96 45.8
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 3.3e-07 59.3 166 34.3
BolC5t34528H Brassica oleracea HOM05D003240 ORTHO05D019881 4.3e-07 58.9 73 50.7
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 7.4e-07 58.2 94 41.5
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 9.7e-07 57.8 80 55.0
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 9.7e-07 57.8 97 42.3
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 1.3e-06 57.4 88 40.9
BolC5t29061H Brassica oleracea HOM05D010893 ORTHO05D032720 2.2e-06 56.6 64 57.8
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 2.2e-06 56.6 63 57.1
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 2.8e-06 56.2 51 68.6
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 3.7e-06 55.8 80 43.8
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 8.2e-06 54.7 159 47.8


User provided reference genes

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