Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 2.8e-143 511.9 257 100.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.0e-140 503.4 257 98.1
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 6.7e-129 464.2 262 90.8
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.7e-127 458.4 262 90.5
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.5e-112 409.8 260 81.2
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 3.7e-111 405.2 263 79.5
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.6e-109 399.8 258 79.8
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.9e-107 392.9 262 79.8
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.9e-107 392.9 263 76.8
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.5e-107 392.5 264 78.8
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 4.6e-93 345.1 264 71.6
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 5.0e-92 341.7 264 67.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 4.3e-91 338.6 266 67.3
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 1.1e-65 254.2 261 53.3
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.8e-65 253.4 247 55.9
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 3.4e-64 249.2 204 59.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 3.8e-63 245.7 208 59.6
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 6.4e-63 245.0 228 57.0
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.1e-62 244.2 198 60.1
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 1.4e-62 243.8 248 55.6
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 1.4e-62 243.8 193 60.1
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.9e-62 243.4 236 55.9
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.9e-62 243.4 250 54.0
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.2e-62 242.7 251 53.8
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 3.2e-62 242.7 261 50.2
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 4.2e-62 242.3 191 59.7
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 7.1e-62 241.5 164 77.4
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 9.3e-62 241.1 250 54.4
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.2e-61 240.7 247 52.2
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.2e-61 240.7 247 52.6
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.2e-61 240.7 243 53.1
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.6e-61 240.4 189 59.3
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 1.6e-61 240.4 208 59.6
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.7e-61 239.6 260 50.4
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.7e-61 239.6 255 54.1
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.7e-61 239.6 261 52.9
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 4.6e-61 238.8 257 53.3
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 4.6e-61 238.8 246 52.4
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 7.8e-61 238.0 198 58.1
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.0e-60 237.7 189 59.8
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.3e-60 237.3 252 52.0
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.3e-60 237.3 234 51.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.7e-60 236.9 179 62.6
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.7e-60 236.9 185 62.2
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.7e-60 236.9 188 61.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 2.3e-60 236.5 198 61.1
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 3.0e-60 236.1 224 54.0
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.9e-60 235.7 247 53.0
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 5.1e-60 235.3 232 53.9
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 6.6e-60 235.0 207 55.6
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 8.7e-60 234.6 251 54.6
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 8.7e-60 234.6 190 59.5
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.5e-59 233.8 197 58.9
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 1.9e-59 233.4 254 52.8
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 1.9e-59 233.4 257 49.8
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 2.5e-59 233.0 249 50.2
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.3e-59 232.6 254 52.4
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.3e-59 232.6 180 60.0
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 5.6e-59 231.9 179 62.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.3e-58 230.7 250 52.4
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 1.6e-58 230.3 260 50.4
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.6e-58 230.3 250 51.6
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 2.8e-58 229.6 265 52.1
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 3.6e-58 229.2 244 52.9
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 3.6e-58 229.2 244 52.0
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 6.2e-58 228.4 255 50.6
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.4e-57 227.3 257 49.4
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 4.0e-57 225.7 244 50.4
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 5.3e-57 225.3 251 48.6
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 2.6e-56 223.0 238 51.7
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 3.4e-56 222.6 248 50.4
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 4.5e-56 222.2 184 59.8
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 5.8e-56 221.9 201 53.7
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.2e-55 219.9 176 59.7
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.9e-54 216.9 244 50.8
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 2.4e-54 216.5 247 50.2
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 7.1e-54 214.9 255 48.2
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.1e-51 207.6 185 58.4
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.8e-50 203.0 191 55.0
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 3.7e-50 202.6 191 53.4
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 4.8e-50 202.2 234 49.6
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 2.7e-45 186.4 199 50.3
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 5.1e-44 182.2 207 45.9
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 8.7e-44 181.4 111 72.1
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.1e-43 181.0 196 47.4
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.1e-42 176.8 182 51.1
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.4e-41 173.3 136 63.2
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.0e-40 170.2 181 48.6
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.3e-35 152.9 127 59.8
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.7e-29 133.3 119 54.6
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.3e-28 131.0 119 52.9
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 5.9e-24 115.5 125 49.6
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.4e-22 110.9 148 40.5
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.5e-16 90.9 54 74.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 4.2e-14 82.8 53 69.8
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 7.9e-13 78.6 109 44.0
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 2.8e-10 70.1 82 50.0
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 2.9e-07 60.1 73 50.7


User provided reference genes

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