Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p68190 Brassica napus HOM05D001518 ORTHO05D006498 6.0e-55 217.2 107 100.0
A04p30770 Brassica napus HOM05D001518 ORTHO05D006498 2.1e-28 129.0 71 88.7
BolC4t28323H Brassica oleracea HOM05D001518 ORTHO05D006498 2.1e-28 129.0 71 87.3
BraA04t18535Z Brassica rapa HOM05D001518 ORTHO05D006498 2.1e-28 129.0 71 88.7
C04p68170 Brassica napus HOM05D001518 ORTHO05D006498 4.8e-28 127.9 71 85.9
AT2G40400 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 4.5e-26 121.3 71 78.9
Carub.0004s2264 Capsella rubella HOM05D001518 ORTHO05D006498 4.5e-26 121.3 71 78.9
AT3G56140 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 7.6e-26 120.6 71 77.5
AL4G38220 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 1.7e-25 119.4 71 77.5
AL5G37460 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 1.7e-25 119.4 71 76.1
Thhalv10005804m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 1.7e-25 119.4 71 77.5
Thhalv10016304m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 1.1e-24 116.7 68 77.9
Sp4g22720 Schrenkiella parvula HOM05D001518 ORTHO05D006498 1.1e-24 116.7 71 77.5
Aa31LG5G19180 Aethionema arabicum HOM05D001518 ORTHO05D006498 1.4e-24 116.3 71 74.6
BcaC08g44762 Brassica carinata HOM05D001518 ORTHO05D006498 1.9e-24 115.9 71 76.1
Aa31LG10G11040 Aethionema arabicum HOM05D001518 ORTHO05D006498 5.4e-24 114.4 71 73.2
Sp5g06390 Schrenkiella parvula HOM05D001518 ORTHO05D006498 5.4e-24 114.4 71 76.1
Thecc.09G230400 Theobroma cacao HOM05D001518 ORTHO05D006498 7.1e-24 114.0 71 76.1
BcaB02g07667 Brassica carinata HOM05D001518 ORTHO05D006498 9.3e-24 113.6 67 79.1
A07p22800 Brassica napus HOM05D001518 ORTHO05D006498 1.2e-23 113.2 71 74.6
C06p23300 Brassica napus HOM05D001518 ORTHO05D006498 1.2e-23 113.2 71 74.6
BolC6t37503H Brassica oleracea HOM05D001518 ORTHO05D006498 1.2e-23 113.2 71 74.6
BraA07t29945Z Brassica rapa HOM05D001518 ORTHO05D006498 1.2e-23 113.2 71 74.6
CARHR135480 Cardamine hirsuta HOM05D001518 ORTHO05D006498 1.2e-23 113.2 71 73.2
THA.LOC104810131 Tarenaya hassleriana HOM05D001518 ORTHO05D006498 2.1e-23 112.5 71 74.6
Actinidia29734 Actinidia chinensis HOM05D001518 ORTHO05D006498 3.5e-23 111.7 71 73.2
FvH4_7g25380 Fragaria vesca HOM05D001518 ORTHO05D006498 3.5e-23 111.7 68 76.5
FAN06G3540 Fragaria x ananassa HOM05D001518 ORTHO05D006498 3.5e-23 111.7 68 76.5
Duzib168G1941 Durio zibethinus HOM05D001518 ORTHO05D006498 1.0e-22 110.2 71 73.2
MD01G1160000 Malus domestica HOM05D001518 ORTHO05D006498 1.0e-22 110.2 68 75.0
Prupe.2G258000 Prunus persica HOM05D001518 ORTHO05D006498 1.0e-22 110.2 71 73.2
ClCG11G005950 Citrullus lanatus HOM05D001518 ORTHO05D006498 1.3e-22 109.8 68 76.5
Ciclev10030811m.g Citrus clementina HOM05D001518 ORTHO05D006498 1.3e-22 109.8 71 71.8
CiPaw.01G302600 Carya illinoinensis HOM05D001518 ORTHO05D006498 1.8e-22 109.4 71 70.4
Dinv21799 Davidia involucrata HOM05D001518 ORTHO05D006498 1.8e-22 109.4 71 71.8
FAN01G2884 Fragaria x ananassa HOM05D001518 ORTHO05D006498 1.8e-22 109.4 68 76.5
PSO339G3904 Papaver somniferum HOM05D001518 ORTHO05D006498 3.9e-22 108.2 71 69.0
PGR044G0181 Punica granatum HOM05D001518 ORTHO05D006498 3.9e-22 108.2 71 69.0
Haze_17295 Corylus avellana HOM05D001518 ORTHO05D006498 5.1e-22 107.8 71 69.0
FAN03G1866 Fragaria x ananassa HOM05D001518 ORTHO05D006498 6.7e-22 107.5 68 75.0
Sed0021910 Sechium edule HOM05D001518 ORTHO05D006498 6.7e-22 107.5 68 75.0
vmacro06911 Vaccinium macrocarpon HOM05D001518 ORTHO05D006498 6.7e-22 107.5 71 70.4
Cfa001256 Carpinus fangiana HOM05D001518 ORTHO05D006498 8.7e-22 107.1 71 69.0
Nn2g11022 Nelumbo nucifera HOM05D001518 ORTHO05D006498 8.7e-22 107.1 68 72.1
GSVIVG01032735001 Vitis vinifera HOM05D001518 ORTHO05D006498 8.7e-22 107.1 71 71.8
Migut.F00620 Erythranthe guttata HOM05D001518 ORTHO05D006498 1.1e-21 106.7 68 72.1
Sc11g0005470 Simmondsia chinensis HOM05D001518 ORTHO05D006498 1.1e-21 106.7 68 72.1
CsaV3_6G002050 Cucumis sativus L. HOM05D001518 ORTHO05D006498 1.5e-21 106.3 68 73.5
RcHm_v2.0_Chr1g0371311 Rosa chinensis HOM05D001518 ORTHO05D006498 1.5e-21 106.3 68 70.6
TAR623G1694 Trochodendron aralioides HOM05D001518 ORTHO05D006498 1.5e-21 106.3 68 72.1
HanXRQChr07g0203501 Helianthus annuus HOM05D001518 ORTHO05D006498 1.9e-21 105.9 71 67.6
QL08p064026 Quercus lobata HOM05D001518 ORTHO05D006498 1.9e-21 105.9 65 73.8
Carub.0005s2289 Capsella rubella HOM05D001518 ORTHO05D006498 2.5e-21 105.5 65 72.3
Medtr3g071970 Medicago truncatula HOM05D001518 ORTHO05D006498 2.5e-21 105.5 68 69.1
Nitab4.5_0002854g0050 Nicotiana tabacum HOM05D001518 ORTHO05D006498 2.5e-21 105.5 71 69.0
PSO384G4720 Papaver somniferum HOM05D001518 ORTHO05D006498 2.5e-21 105.5 71 66.2
Sed0027098 Sechium edule HOM05D001518 ORTHO05D006498 2.5e-21 105.5 71 69.0
MELO3C008325.2 Cucumis melo HOM05D001518 ORTHO05D006498 3.3e-21 105.1 68 72.1
Manes.10G007200 Manihot esculenta HOM05D001518 ORTHO05D006498 3.3e-21 105.1 66 69.7
PGSC0003DMG400023943 Solanum tuberosum HOM05D001518 ORTHO05D006498 3.3e-21 105.1 71 69.0
COL.COLO4_24867 Corchorus olitorius HOM05D001518 ORTHO05D006498 4.3e-21 104.8 71 69.0
Solyc06g050620.3 Solanum lycopersicum HOM05D001518 ORTHO05D006498 4.3e-21 104.8 71 70.4
Sopen06g016190 Solanum pennellii HOM05D001518 ORTHO05D006498 4.3e-21 104.8 71 70.4
SGA_v2.0_scaffold145G36000 Striga asiatica HOM05D001518 ORTHO05D006498 4.3e-21 104.8 71 69.0
ECA238G1259 Erigeron canadensis HOM05D001518 ORTHO05D006498 9.6e-21 103.6 71 64.8
Gohir.A07G124600 Gossypium hirsutum HOM05D001518 ORTHO05D006498 9.6e-21 103.6 71 69.0
Lj1C962G10 Lonicera japonica HOM05D001518 ORTHO05D006498 9.6e-21 103.6 88 61.4
Rhsim03G0148300 Rhododendron simsii HOM05D001518 ORTHO05D006498 9.6e-21 103.6 71 69.0
TWI53G0536 Tripterygium wilfordii HOM05D001518 ORTHO05D006498 9.6e-21 103.6 71 63.4
Lj6g0017401 Lotus japonicus HOM05D001518 ORTHO05D006498 1.3e-20 103.2 68 67.6
Phvul.001G247100 Phaseolus vulgaris HOM05D001518 ORTHO05D006498 1.3e-20 103.2 68 69.1
AUR62022961 Chenopodium quinoa HOM05D001518 ORTHO05D006498 1.6e-20 102.8 70 68.6
arahy.Tifrunner.gnm1.ann1.1N0RH8 Arachis hypogaea HOM05D001518 ORTHO05D006498 2.1e-20 102.4 71 66.2
EL10Ac2g04913 Beta vulgaris HOM05D001518 ORTHO05D006498 2.1e-20 102.4 71 66.2
Aqoxy2G00769 Aquilegia oxysepala HOM05D001518 ORTHO05D006498 2.8e-20 102.1 71 67.6
CAN.G659.7 Capsicum annuum HOM05D001518 ORTHO05D006498 2.8e-20 102.1 71 66.2
Ca_15169_v3 Cicer arietinum L. HOM05D001518 ORTHO05D006498 2.8e-20 102.1 68 69.1
Glyma.18G023200 Glycine max HOM05D001518 ORTHO05D006498 2.8e-20 102.1 68 67.6
Hma1.2p1_1687F.1_g297510 Hydrangea macrophylla HOM05D001518 ORTHO05D006498 2.8e-20 102.1 71 66.2
Nitab4.5_0001291g0130 Nicotiana tabacum HOM05D001518 ORTHO05D006498 2.8e-20 102.1 68 67.6
Gorai.001G139200 Gossypium raimondii HOM05D001518 ORTHO05D006498 3.7e-20 101.7 68 69.1
Lj8A60T48 Lonicera japonica HOM05D001518 ORTHO05D006498 3.7e-20 101.7 71 64.8
VMungo1383G3076 Vigna mungo HOM05D001518 ORTHO05D006498 3.7e-20 101.7 71 64.8
AUR62012321 Chenopodium quinoa HOM05D001518 ORTHO05D006498 4.8e-20 101.3 71 66.2
TPR.G29216 Trifolium pratense HOM05D001518 ORTHO05D006498 4.8e-20 101.3 68 64.7
arahy.Tifrunner.gnm1.ann1.73F65L Arachis hypogaea HOM05D001518 ORTHO05D006498 6.2e-20 100.9 71 64.8
Psat5g126120 Pisum sativum HOM05D001518 ORTHO05D006498 6.2e-20 100.9 68 64.7
CANSAT56G0726 Cannabis sativa HOM05D001518 ORTHO05D006498 8.1e-20 100.5 68 67.6
SalBow3G0728 Salvia bowleyana HOM05D001518 ORTHO05D006498 8.1e-20 100.5 71 64.8
Glyma.11G233800 Glycine max HOM05D001518 ORTHO05D006498 2.4e-19 99.0 68 64.7
Lalb_Chr08g0231381 Lupinus albus HOM05D001518 ORTHO05D006498 2.4e-19 99.0 68 63.2
Ah.16g104010 Amaranthus hybridus HOM05D001518 ORTHO05D006498 3.1e-19 98.6 71 62.0
Gohir.D07G128900 Gossypium hirsutum HOM05D001518 ORTHO05D006498 3.1e-19 98.6 68 67.6
Lsat_1_v5_gn_2_125780 Lactuca sativa HOM05D001518 ORTHO05D006498 4.0e-19 98.2 71 60.6
CDE07G0354 Ceratophyllum demersum HOM05D001518 ORTHO05D006498 5.3e-19 97.8 68 67.6
Lalb_Chr11g0075101 Lupinus albus HOM05D001518 ORTHO05D006498 6.9e-19 97.4 66 65.2
ATR0594G213 Amborella trichopoda HOM05D001518 ORTHO05D006498 9.0e-19 97.1 65 67.7
Eucgr.J00163 Eucalyptus grandis HOM05D001518 ORTHO05D006498 1.5e-18 96.3 68 60.3
Cc02_g05880 Coffea canephora HOM05D001518 ORTHO05D006498 2.0e-18 95.9 71 59.2
Os01g0826900 Oryza sativa ssp. japonica HOM05D001518 ORTHO05D006498 2.0e-18 95.9 71 62.0
unitig_62.g23927 Utricularia gibba HOM05D001518 ORTHO05D006498 2.0e-18 95.9 68 64.7
SalBow5G2006 Salvia bowleyana HOM05D001518 ORTHO05D006498 3.4e-18 95.1 71 60.6
Sabra08G0055300 Salix brachista HOM05D001518 ORTHO05D006498 4.5e-18 94.7 71 59.2
SGA_v2.0_scaffold44G16654 Striga asiatica HOM05D001518 ORTHO05D006498 9.9e-18 93.6 68 63.2
Hund15866 Selenicereus undatus HOM05D001518 ORTHO05D006498 1.3e-17 93.2 71 59.2
Zm00001eb149270 Zea mays HOM05D001518 ORTHO05D006498 1.7e-17 92.8 65 64.6
HPP92_019734 Vanilla planifolia HOM05D001518 ORTHO05D006498 1.4e-16 89.7 64 62.5
DCAR_011861 Daucus carota HOM05D001518 ORTHO05D006498 2.4e-16 89.0 71 59.2
Zm00001eb351960 Zea mays HOM05D001518 ORTHO05D006498 3.2e-16 88.6 71 57.7
FAN10G1819 Fragaria x ananassa HOM05D001518 ORTHO05D006498 2.5e-13 79.0 70 62.9
Manes.07G135966 Manihot esculenta HOM05D001518 ORTHO05D006498 2.8e-12 75.5 53 62.3
Cpa.g.sc19.113 Carica papaya HOM05D001518 ORTHO05D006498 4.8e-12 74.7 76 48.7
SMO164G0201 Selaginella moellendorffii HOM05D001518 ORTHO05D006498 3.1e-11 72.0 71 47.9
Pp3c3_35080 Physcomitrium patens HOM05D001518 ORTHO05D006498 1.2e-10 70.1 65 49.2
Migut.F01461 Erythranthe guttata HOM05D001518 ORTHO05D006498 1.5e-10 69.7 41 70.7
Pp3c8_1750 Physcomitrium patens HOM05D001518 ORTHO05D006498 5.8e-10 67.8 65 50.8
MBI03_g45955_MAGBIO Magnolia biondii HOM05D001518 ORTHO05D006498 2.9e-09 65.5 38 65.8
CARHR166290 Cardamine hirsuta HOM05D001518 ORTHO05D006498 1.1e-08 63.5 36 72.2
CBR_g38031 Chara braunii HOM05D001518 ORTHO05D006498 9.3e-08 60.5 65 44.6
AagrBONN_evm.TU.Sc2ySwM_228.3192 Anthoceros agrestis HOM05D001518 ORTHO05D006498 1.2e-07 60.1 58 44.8
AL1G44650 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 3.5e-07 58.5 40 65.0
Mapoly0059s0064 Marchantia polymorpha HOM05D001518 ORTHO05D006498 3.5e-07 58.5 64 43.8
Oeu008086.2 Olea europaea HOM05D001518 ORTHO05D006498 1.0e-06 57.0 41 58.5
AL4G11590 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 2.3e-06 55.8 40 60.0
Potri.008G074300 Populus trichocarpa HOM05D001518 ORTHO05D006498 8.7e-06 53.9 36 58.3


User provided reference genes

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