Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p68090 Brassica napus HOM05D025610 ORTHO05D016804 3.2e-74 281.6 134 100.0
BolC4t28314H Brassica oleracea HOM05D025610 ORTHO05D016804 3.2e-74 281.6 134 100.0
C04p68020 Brassica napus HOM05D025610 ORTHO05D016804 1.6e-44 183.0 125 75.2
BolC4t28308H Brassica oleracea HOM05D025610 ORTHO05D016804 1.6e-44 183.0 125 75.2
BraA06t25826Z Brassica rapa HOM05D003696 ORTHO05D016804 1.4e-24 116.7 62 90.3
A04p29630 Brassica napus HOM05D003696 ORTHO05D005158 1.3e-22 110.2 109 54.1
BraA04t18429Z Brassica rapa HOM05D003696 ORTHO05D005158 1.3e-22 110.2 109 54.1
Thhalv10016535m.g Eutrema salsugineum HOM05D003696 ORTHO05D005158 1.3e-22 110.2 109 54.1
Sp4g21230 Schrenkiella parvula HOM05D003696 ORTHO05D005158 1.3e-22 110.2 109 54.1
BcaC01g05515 Brassica carinata HOM05D003696 ORTHO05D005158 2.9e-22 109.0 109 53.2
A03p21680 Brassica napus HOM05D003696 ORTHO05D005158 2.9e-22 109.0 109 53.2
C03p25680 Brassica napus HOM05D003696 ORTHO05D005158 2.9e-22 109.0 109 53.2
BolC3t14954H Brassica oleracea HOM05D003696 ORTHO05D005158 2.9e-22 109.0 109 53.2
BraA03t11403Z Brassica rapa HOM05D003696 ORTHO05D005158 2.9e-22 109.0 109 53.2
CARHR133570 Cardamine hirsuta HOM05D003696 ORTHO05D005158 3.7e-22 108.6 109 52.3
BcaC02g07441 Brassica carinata HOM05D003696 ORTHO05D005158 4.9e-22 108.2 109 53.2
C04p66920 Brassica napus HOM05D003696 ORTHO05D005158 4.9e-22 108.2 109 53.2
Carub.0004s2087 Capsella rubella HOM05D003696 ORTHO05D005158 8.3e-22 107.5 105 54.3
BcaB01g03621 Brassica carinata HOM05D003696 ORTHO05D005158 1.9e-21 106.3 109 52.3
AL4G36150 Arabidopsis lyrata HOM05D003696 ORTHO05D005158 2.4e-21 105.9 105 53.3
AT2G38840 Arabidopsis thaliana HOM05D003696 ORTHO05D005158 2.4e-21 105.9 105 53.3
Aa31LG5G20830 Aethionema arabicum HOM05D003696 ORTHO05D005158 5.4e-21 104.8 109 51.4
BolC4t28193H Brassica oleracea HOM05D003696 ORTHO05D005158 2.1e-20 102.8 109 52.3
THA.LOC104804694 Tarenaya hassleriana HOM05D003696 ORTHO05D005158 4.6e-20 101.7 109 49.5
GSVIVG01000711001 Vitis vinifera HOM05D003696 ORTHO05D005158 1.0e-19 100.5 109 48.6
TWI75G1072 Tripterygium wilfordii HOM05D003696 ORTHO05D005158 1.7e-19 99.8 109 46.8
CsaV3_7G027640 Cucumis sativus L. HOM05D003696 ORTHO05D005158 2.3e-19 99.4 112 46.4
BcaC02g07333 Brassica carinata HOM05D001127 ORTHO05D016804 5.1e-19 98.2 48 95.8
TWI18G1352 Tripterygium wilfordii HOM05D003696 ORTHO05D005158 5.1e-19 98.2 109 45.9
ClCG09G007480 Citrullus lanatus HOM05D003696 ORTHO05D005158 6.6e-19 97.8 112 46.4
FvH4_2g22730 Fragaria vesca HOM05D003696 ORTHO05D005158 6.6e-19 97.8 109 47.7
FAN15G1876 Fragaria x ananassa HOM05D003696 ORTHO05D005158 6.6e-19 97.8 109 47.7
FAN20G1369 Fragaria x ananassa HOM05D003696 ORTHO05D005158 6.6e-19 97.8 109 47.7
FAN24G1113 Fragaria x ananassa HOM05D003696 ORTHO05D005158 6.6e-19 97.8 109 47.7
FAN27G2942 Fragaria x ananassa HOM05D003696 ORTHO05D005158 6.6e-19 97.8 109 47.7
MELO3C015756.2 Cucumis melo HOM05D003696 ORTHO05D005158 8.6e-19 97.4 112 46.4
Sopen06g035470 Solanum pennellii HOM05D003696 ORTHO05D005158 1.1e-18 97.1 109 46.8
Solyc06g084080.4 Solanum lycopersicum HOM05D003696 ORTHO05D005158 1.5e-18 96.7 109 46.8
PGSC0003DMG400020060 Solanum tuberosum HOM05D003696 ORTHO05D005158 1.5e-18 96.7 109 46.8
Sed0021830 Sechium edule HOM05D003696 ORTHO05D005158 1.9e-18 96.3 112 45.5
THA.LOC104824177 Tarenaya hassleriana HOM05D003696 ORTHO05D005158 1.9e-18 96.3 109 45.9
Lalb_Chr06g0162701 Lupinus albus HOM05D003696 ORTHO05D005158 2.5e-18 95.9 109 47.7
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 2.5e-18 95.9 105 49.5
HPP92_012304 Vanilla planifolia HOM05D003696 ORTHO05D005158 2.5e-18 95.9 105 46.7
CANSAT25G2047 Cannabis sativa HOM05D003696 ORTHO05D005158 3.3e-18 95.5 109 45.9
Manes.01G202600 Manihot esculenta HOM05D003696 ORTHO05D005158 3.3e-18 95.5 109 46.8
CAN.G1488.3 Capsicum annuum HOM05D003696 ORTHO05D005158 4.3e-18 95.1 109 45.0
Cc01_g18910 Coffea canephora HOM05D003696 ORTHO05D005158 4.3e-18 95.1 109 45.9
Haze_24522 Corylus avellana HOM05D003696 ORTHO05D005158 4.3e-18 95.1 114 44.7
RcHm_v2.0_Chr6g0289661 Rosa chinensis HOM05D003696 ORTHO05D005158 4.3e-18 95.1 109 45.0
Nitab4.5_0004899g0140 Nicotiana tabacum HOM05D003696 ORTHO05D005158 5.6e-18 94.7 109 45.9
Nitab4.5_0000187g0140 Nicotiana tabacum HOM05D003696 ORTHO05D005158 7.3e-18 94.4 109 44.0
Nitab4.5_0003053g0040 Nicotiana tabacum HOM05D003696 ORTHO05D005158 7.3e-18 94.4 109 44.0
Sabra02G0037000 Salix brachista HOM05D003696 ORTHO05D005158 7.3e-18 94.4 109 45.9
ATR0665G388 Amborella trichopoda HOM05D003696 ORTHO05D005158 9.5e-18 94.0 109 45.9
HanXRQChr01g0006891 Helianthus annuus HOM05D003696 ORTHO05D005158 9.5e-18 94.0 105 48.6
Lsat_1_v5_gn_5_186821 Lactuca sativa HOM05D003696 ORTHO05D005158 9.5e-18 94.0 109 45.0
Nn1g02525 Nelumbo nucifera HOM05D003696 ORTHO05D005158 9.5e-18 94.0 109 45.0
COL.COLO4_06092 Corchorus olitorius HOM05D003696 ORTHO05D005158 1.2e-17 93.6 109 45.9
Oeu011521.4 Olea europaea HOM05D003696 ORTHO05D005158 1.2e-17 93.6 109 45.9
PSO210G6865 Papaver somniferum HOM05D003696 ORTHO05D005158 1.2e-17 93.6 109 45.0
Potri.002G046000 Populus trichocarpa HOM05D003696 ORTHO05D005158 1.2e-17 93.6 109 45.0
Potri.005G217300 Populus trichocarpa HOM05D003696 ORTHO05D005158 1.2e-17 93.6 109 45.9
Lj2C1161G6 Lonicera japonica HOM05D003696 ORTHO05D005158 1.6e-17 93.2 109 45.9
Zm00001eb060900 Zea mays HOM05D003696 ORTHO05D020192 1.6e-17 93.2 109 42.2
Atru.chr5.1552 Acer truncatum HOM05D003696 ORTHO05D005158 2.1e-17 92.8 109 44.0
Actinidia04660 Actinidia chinensis HOM05D003696 ORTHO05D005158 2.1e-17 92.8 112 44.6
Actinidia21150 Actinidia chinensis HOM05D003696 ORTHO05D005158 2.1e-17 92.8 112 44.6
Duzib133G0262 Durio zibethinus HOM05D003696 ORTHO05D005158 2.1e-17 92.8 109 45.9
PGR119G0829 Punica granatum HOM05D003696 ORTHO05D005158 2.1e-17 92.8 105 47.6
Solyc09g065810.3 Solanum lycopersicum HOM05D003696 ORTHO05D005158 2.1e-17 92.8 109 45.0
Sopen09g027590 Solanum pennellii HOM05D003696 ORTHO05D005158 2.1e-17 92.8 109 45.0
AUR62011954 Chenopodium quinoa HOM05D003696 ORTHO05D005158 2.8e-17 92.4 109 45.0
AUR62032267 Chenopodium quinoa HOM05D003696 ORTHO05D005158 2.8e-17 92.4 109 45.0
Dinv22488 Davidia involucrata HOM05D003696 ORTHO05D005158 2.8e-17 92.4 109 45.9
Eucgr.B01485 Eucalyptus grandis HOM05D003696 ORTHO05D005158 2.8e-17 92.4 105 47.6
Manes.05G083700 Manihot esculenta HOM05D003696 ORTHO05D005158 2.8e-17 92.4 109 45.0
PSO832G3077 Papaver somniferum HOM05D003696 ORTHO05D005158 2.8e-17 92.4 109 45.0
Ciclev10019381m.g Citrus clementina HOM05D003696 ORTHO05D005158 3.6e-17 92.0 109 45.0
Migut.D00342 Erythranthe guttata HOM05D003696 ORTHO05D005158 3.6e-17 92.0 105 47.6
Lalb_Chr01g0019921 Lupinus albus HOM05D003696 ORTHO05D005158 3.6e-17 92.0 109 45.9
Peaxi162Scf00049g02229 Petunia axillaris HOM05D003696 ORTHO05D005158 3.6e-17 92.0 105 45.7
Zm00001eb060800 Zea mays HOM05D003696 ORTHO05D005158 3.6e-17 92.0 109 41.3
ECA248G0710 Erigeron canadensis HOM05D003696 ORTHO05D005158 4.7e-17 91.7 105 47.6
Glyma.02G143000 Glycine max HOM05D003696 ORTHO05D005158 4.7e-17 91.7 109 44.0
HanXRQChr06g0177911 Helianthus annuus HOM05D003696 ORTHO05D005158 4.7e-17 91.7 105 47.6
Hma1.2p1_0760F.1_g214220 Hydrangea macrophylla HOM05D003696 ORTHO05D005158 4.7e-17 91.7 109 45.0
CSS0026583 Camellia sinensis var. sinensis HOM05D003696 ORTHO05D005158 6.2e-17 91.3 109 44.0
QL12p042578 Quercus lobata HOM05D003696 ORTHO05D005158 6.2e-17 91.3 109 45.0
Rhsim01G0270500 Rhododendron simsii HOM05D003696 ORTHO05D005158 6.2e-17 91.3 109 44.0
MD11G1276500 Malus domestica HOM05D003696 ORTHO05D005158 8.1e-17 90.9 109 45.0
Thecc.01G268800 Theobroma cacao HOM05D003696 ORTHO05D005158 8.1e-17 90.9 109 45.0
vmacro02623 Vaccinium macrocarpon HOM05D003696 ORTHO05D005158 8.1e-17 90.9 114 43.0
CiPaw.03G256800 Carya illinoinensis HOM05D003696 ORTHO05D005158 1.1e-16 90.5 109 45.0
Rhsim13G0030400 Rhododendron simsii HOM05D003696 ORTHO05D005158 1.1e-16 90.5 109 44.0
vmacro14880 Vaccinium macrocarpon HOM05D003696 ORTHO05D005158 1.1e-16 90.5 147 36.1
DCAR_002690 Daucus carota HOM05D003696 ORTHO05D005158 1.4e-16 90.1 109 45.9
Gohir.A11G126500 Gossypium hirsutum HOM05D003696 ORTHO05D005158 1.4e-16 90.1 105 45.7
MD03G1255900 Malus domestica HOM05D003696 ORTHO05D005158 1.4e-16 90.1 109 44.0
TAR362G0028 Trochodendron aralioides HOM05D003696 ORTHO05D005158 1.4e-16 90.1 114 43.0
TAR365G0099 Trochodendron aralioides HOM05D003696 ORTHO05D005158 1.4e-16 90.1 105 46.7
Aqoxy2G03500 Aquilegia oxysepala HOM05D003696 ORTHO05D005158 2.3e-16 89.4 109 43.1
Aqoxy5G00373 Aquilegia oxysepala HOM05D003696 ORTHO05D005158 2.3e-16 89.4 105 44.8
Peaxi162Scf01311g00020 Petunia axillaris HOM05D003696 ORTHO05D005158 2.3e-16 89.4 109 45.0
SalBow4G1850 Salvia bowleyana HOM05D003696 ORTHO05D005158 2.3e-16 89.4 105 47.6
Hund22719 Selenicereus undatus HOM05D003696 ORTHO05D005158 2.3e-16 89.4 109 44.0
arahy.Tifrunner.gnm1.ann1.PHA4NK Arachis hypogaea HOM05D003696 ORTHO05D005158 3.1e-16 89.0 109 44.0
arahy.Tifrunner.gnm1.ann1.R5NTZZ Arachis hypogaea HOM05D003696 ORTHO05D005158 3.1e-16 89.0 109 44.0
Gohir.D11G132000 Gossypium hirsutum HOM05D003696 ORTHO05D005158 3.1e-16 89.0 105 44.8
Gorai.007G141200 Gossypium raimondii HOM05D003696 ORTHO05D005158 3.1e-16 89.0 105 44.8
Os07g0181700 Oryza sativa ssp. japonica HOM05D003696 ORTHO05D005158 3.1e-16 89.0 105 41.0
Phvul.007G176200 Phaseolus vulgaris HOM05D003696 ORTHO05D005158 3.1e-16 89.0 105 45.7
Prupe.8G233000 Prunus persica HOM05D003696 ORTHO05D005158 3.1e-16 89.0 109 43.1
CAN.G771.13 Capsicum annuum HOM05D003696 ORTHO05D005158 5.2e-16 88.2 105 44.8
Lj1g0000304 Lotus japonicus HOM05D003696 ORTHO05D005158 5.2e-16 88.2 109 42.2
Os03g0796800 Oryza sativa ssp. japonica HOM05D003696 ORTHO05D005158 5.2e-16 88.2 109 39.4
unitig_22.g5276 Utricularia gibba HOM05D003696 ORTHO05D005158 5.2e-16 88.2 105 44.8
EL10Ac5g10463 Beta vulgaris HOM05D003696 ORTHO05D005158 6.8e-16 87.8 109 42.2
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 6.8e-16 87.8 44 90.9
CDE07G1976 Ceratophyllum demersum HOM05D003696 ORTHO05D005158 6.8e-16 87.8 109 44.0
Glyma.10G031400 Glycine max HOM05D003696 ORTHO05D005158 6.8e-16 87.8 109 43.1
Gohir.A07G208500 Gossypium hirsutum HOM05D003696 ORTHO05D005158 8.9e-16 87.4 109 43.1
Gohir.D07G214400 Gossypium hirsutum HOM05D003696 ORTHO05D005158 8.9e-16 87.4 109 43.1
Gorai.001G242400 Gossypium raimondii HOM05D003696 ORTHO05D005158 8.9e-16 87.4 109 43.1
MSTRG.18280 Avicennia marina HOM05D003696 ORTHO05D005158 1.5e-15 86.7 105 46.7
CDE04G3179 Ceratophyllum demersum HOM05D003696 ORTHO05D005158 1.5e-15 86.7 109 43.1
SHI09972 Sapria himalayana HOM05D003696 ORTHO05D005158 2.0e-15 86.3 113 40.7
Duzib138G0212 Durio zibethinus HOM05D003696 ORTHO05D005158 3.4e-15 85.5 141 39.0
Medtr1g070940 Medicago truncatula HOM05D003696 ORTHO05D005158 5.8e-15 84.7 109 42.2
Lj5g0013019 Lotus japonicus HOM05D003696 ORTHO05D005158 7.6e-15 84.3 109 41.3
SEGI_18155 Sequoiadendron giganteum HOM05D003696 ORTHO05D005158 2.2e-14 82.8 105 43.8
VMungo0720G2873 Vigna mungo HOM05D003696 ORTHO05D005158 2.9e-14 82.4 105 42.9
arahy.Tifrunner.gnm1.ann1.YF2GLB Arachis hypogaea HOM05D003696 ORTHO05D005158 4.9e-14 81.6 105 42.9
TPR.G39048 Trifolium pratense HOM05D003696 ORTHO05D005158 8.4e-14 80.9 109 39.4
Cpa.g.sc52.106 Carica papaya HOM05D003696 ORTHO05D005158 1.4e-13 80.1 44 84.1
arahy.Tifrunner.gnm1.ann1.RW1UC5 Arachis hypogaea HOM05D003696 ORTHO05D005158 1.9e-13 79.7 105 42.9
Medtr7g096020 Medicago truncatula HOM05D003696 ORTHO05D005158 1.9e-13 79.7 109 39.4
Psat6g058040 Pisum sativum HOM05D003696 ORTHO05D005158 3.2e-13 79.0 103 42.7
Ca_08640_v3 Cicer arietinum L. HOM05D003696 ORTHO05D005158 5.4e-13 78.2 109 39.4
Sed0026747 Sechium edule HOM05D003696 ORTHO05D005158 5.4e-13 78.2 47 74.5
Psat3g060760 Pisum sativum HOM05D003696 ORTHO05D005158 7.1e-13 77.8 109 38.5
TPR.G19113 Trifolium pratense HOM05D003696 ORTHO05D005158 2.7e-12 75.9 109 38.5
Zm00001eb301480 Zea mays HOM05D003696 ORTHO05D005158 2.7e-12 75.9 105 35.2
arahy.Tifrunner.gnm1.ann1.1H3032 Arachis hypogaea HOM05D003696 ORTHO05D005158 6.0e-12 74.7 102 42.2
Oeu025782.1 Olea europaea HOM05D003696 ORTHO05D005158 3.0e-11 72.4 47 68.1
SMO358G0641 Selaginella moellendorffii HOM05D003696 ORTHO05D005158 6.6e-11 71.2 105 38.1
Dinv34560 Davidia involucrata HOM05D003696 ORTHO05D005158 1.9e-10 69.7 44 70.5
Pp3c22_17680 Physcomitrium patens HOM05D003696 ORTHO05D005158 1.9e-10 69.7 109 38.5
C04p68070 Brassica napus HOM05D003696 ORTHO05D016804 3.3e-10 68.9 44 77.3
BolC4t28312H Brassica oleracea HOM05D003696 ORTHO05D016804 3.3e-10 68.9 44 77.3
HanXRQChr04g0094761 Helianthus annuus HOM05D003696 ORTHO05D005158 3.3e-10 68.9 44 72.7
Nitab4.5_0001044g0030 Nicotiana tabacum HOM05D003696 ORTHO05D005158 3.3e-10 68.9 47 66.0
Sc05g0001070 Simmondsia chinensis HOM05D003696 ORTHO05D005158 4.3e-10 68.6 44 72.7
Actinidia24931 Actinidia chinensis HOM05D003696 ORTHO05D005158 5.6e-10 68.2 44 70.5
arahy.Tifrunner.gnm1.ann1.VHR0A7 Arachis hypogaea HOM05D001154 ORTHO05D010892 1.2e-09 67.0 93 40.9
DCAR_018442 Daucus carota HOM05D003696 ORTHO05D005158 1.2e-09 67.0 47 66.0
Mapoly0093s0035 Marchantia polymorpha HOM05D003696 ORTHO05D005158 2.1e-09 66.2 109 35.8
BraA04t18521Z Brassica rapa HOM05D000956 ORTHO05D016804 9.9e-07 57.4 34 79.4


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