Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p67020 Brassica napus HOM05D001636 ORTHO05D033314 4.0e-78 294.7 145 100.0
BolC4t28204H Brassica oleracea HOM05D001636 ORTHO05D033314 4.9e-60 234.6 118 95.8
BraA04t18438Z Brassica rapa HOM05D001636 ORTHO05D033314 1.9e-59 232.6 139 84.9
BraA05t18996Z Brassica rapa HOM05D001636 ORTHO05D018456 5.8e-37 157.9 121 69.4
BcaC02g12800 Brassica carinata HOM05D001636 ORTHO05D018456 3.8e-36 155.2 140 63.6
C04p00350 Brassica napus HOM05D001636 ORTHO05D018456 3.2e-35 152.1 121 67.8
BolC4t21677H Brassica oleracea HOM05D001636 ORTHO05D018456 3.2e-35 152.1 121 67.8
BolSC55t61225H Brassica oleracea HOM05D001636 ORTHO05D018456 3.2e-35 152.1 121 67.8
BcaC02g12798 Brassica carinata HOM05D001636 ORTHO05D018456 9.3e-35 150.6 121 66.9
BNapus_Darmor_BZH_scaffold_188p00110 Brassica napus HOM05D001636 ORTHO05D018456 2.3e-33 146.0 118 66.9
A04p29740 Brassica napus HOM05D001636 ORTHO05D102692 6.9e-30 134.4 67 97.0
AL3G38360 Arabidopsis lyrata HOM05D001636 ORTHO05D018456 4.9e-28 128.3 139 55.4
BolSC55t61221H Brassica oleracea HOM05D001636 ORTHO05D105315 2.9e-20 102.4 133 48.9
Carub.0002s1385 Capsella rubella HOM05D001636 ORTHO05D009134 4.3e-16 88.6 129 42.6
Thhalv10005934m.g Eutrema salsugineum HOM05D001636 ORTHO05D009134 6.3e-15 84.7 115 43.5
BolC9t58608H Brassica oleracea HOM05D001636 ORTHO05D009134 8.2e-15 84.3 120 40.8
Carub.0003s0625 Capsella rubella HOM05D001636 ORTHO05D009134 1.8e-14 83.2 116 39.7
C09p57360 Brassica napus HOM05D001636 ORTHO05D009134 3.1e-14 82.4 120 40.0
CARHR175440 Cardamine hirsuta HOM05D001636 ORTHO05D009134 1.2e-13 80.5 126 41.3
Thhalv10000121m.g Eutrema salsugineum HOM05D001636 ORTHO05D009134 1.2e-13 80.5 119 38.7
AL8G35170 Arabidopsis lyrata HOM05D001636 ORTHO05D009134 1.5e-13 80.1 121 40.5
AL5G45620 Arabidopsis lyrata HOM05D001636 ORTHO05D009134 3.4e-13 79.0 129 38.8
Carub.0006s0379 Capsella rubella HOM05D001636 ORTHO05D009134 7.7e-13 77.8 132 40.9
AL3G40410 Arabidopsis lyrata HOM05D001636 ORTHO05D009134 1.3e-12 77.0 121 38.8
Thhalv10024069m.g Eutrema salsugineum HOM05D001636 ORTHO05D009134 6.5e-12 74.7 125 39.2
A07p35040 Brassica napus HOM05D001636 ORTHO05D009134 1.1e-11 73.9 124 41.1
BcaB02g08776 Brassica carinata HOM05D001636 ORTHO05D009134 3.2e-11 72.4 121 38.0
AT3G62850 Arabidopsis thaliana HOM05D001636 ORTHO05D009134 4.2e-11 72.0 119 35.3
C06p41230 Brassica napus HOM05D001636 ORTHO05D009134 1.2e-10 70.5 124 40.3
BolC6t39302H Brassica oleracea HOM05D001636 ORTHO05D009134 1.2e-10 70.5 124 40.3
C04p70100 Brassica napus HOM05D001636 ORTHO05D009134 1.6e-10 70.1 121 37.2
C06p41280 Brassica napus HOM05D001636 ORTHO05D009134 1.6e-10 70.1 124 40.3
BolC3t16817H Brassica oleracea HOM05D001636 ORTHO05D009134 1.6e-10 70.1 112 39.3
C07p49300 Brassica napus HOM05D001636 ORTHO05D009134 2.1e-10 69.7 123 35.8
C03p60340 Brassica napus HOM05D001636 ORTHO05D021846 6.1e-10 68.2 130 34.6
BcaB02g09846 Brassica carinata HOM05D001165 ORTHO05D001347 1.4e-09 67.0 118 38.1
BcaC01g04096 Brassica carinata HOM05D001636 ORTHO05D009134 2.3e-09 66.2 112 37.5
BcaC01g02796 Brassica carinata HOM05D001636 ORTHO05D009134 3.9e-09 65.5 119 36.1
BcaC06g33505 Brassica carinata HOM05D001636 ORTHO05D009134 3.9e-09 65.5 113 37.2
C07p48170 Brassica napus HOM05D001636 ORTHO05D009134 3.9e-09 65.5 113 37.2
BolC7t45340H Brassica oleracea HOM05D001636 ORTHO05D009134 3.9e-09 65.5 113 37.2
BcaNung02679 Brassica carinata HOM05D001636 ORTHO05D021846 5.1e-09 65.1 121 34.7
BcaNung03075 Brassica carinata HOM05D001636 ORTHO05D009134 5.1e-09 65.1 113 38.1
C07p49280 Brassica napus HOM05D001636 ORTHO05D009134 5.1e-09 65.1 113 37.2
C07p50280 Brassica napus HOM05D001636 ORTHO05D009134 5.1e-09 65.1 113 38.1
BolC3t18300H Brassica oleracea HOM05D001636 ORTHO05D021846 5.1e-09 65.1 119 36.1
BolC7t45530H Brassica oleracea HOM05D001636 ORTHO05D009134 5.1e-09 65.1 113 38.1
BraA03t14241Z Brassica rapa HOM05D001636 ORTHO05D009134 6.7e-09 64.7 109 40.4
A03p55260 Brassica napus HOM05D001636 ORTHO05D009134 8.8e-09 64.3 122 33.6
C03p60230 Brassica napus HOM05D001636 ORTHO05D009134 8.8e-09 64.3 122 35.2
BcaC09g52273 Brassica carinata HOM05D001636 ORTHO05D009134 1.5e-08 63.5 115 33.9
A02p42600 Brassica napus HOM05D001636 ORTHO05D009134 1.5e-08 63.5 116 34.5
C08p15280 Brassica napus HOM05D001636 ORTHO05D009134 1.5e-08 63.5 117 35.9
BolC3t18292H Brassica oleracea HOM05D001636 ORTHO05D009134 1.5e-08 63.5 114 36.8
BcaC01g02792 Brassica carinata HOM05D005381 ORTHO05D006674 2.0e-08 63.2 115 36.5
BcaC06g31371 Brassica carinata HOM05D001636 ORTHO05D009134 2.0e-08 63.2 115 36.5
C03p60400 Brassica napus HOM05D001636 ORTHO05D021846 2.0e-08 63.2 115 36.5
BolC3t18295H Brassica oleracea HOM05D001636 ORTHO05D021846 2.0e-08 63.2 115 36.5
BcaC03g14332 Brassica carinata HOM05D001636 ORTHO05D009134 5.7e-08 61.6 132 35.6
C02p17520 Brassica napus HOM05D001636 ORTHO05D009134 7.4e-08 61.2 130 36.2
C02p25960 Brassica napus HOM05D001636 ORTHO05D009134 7.4e-08 61.2 128 35.2
C07p53540 Brassica napus HOM05D001636 ORTHO05D009134 7.4e-08 61.2 122 33.6
BcaC03g18185 Brassica carinata HOM05D001636 ORTHO05D009134 1.3e-07 60.5 116 32.8
A03p50890 Brassica napus HOM05D001636 ORTHO05D009134 1.3e-07 60.5 115 36.5
C07p43040 Brassica napus HOM05D001636 ORTHO05D009134 1.3e-07 60.5 119 34.5
BraA06t26475Z Brassica rapa HOM05D001636 ORTHO05D009134 1.3e-07 60.5 119 34.5
BraA03t14176Z Brassica rapa HOM05D001636 ORTHO05D009134 1.7e-07 60.1 115 36.5
C01p33890 Brassica napus HOM05D001636 ORTHO05D009134 2.2e-07 59.7 130 35.4
BolC7t45436H Brassica oleracea HOM05D001636 ORTHO05D009134 2.2e-07 59.7 115 33.9
C02p17550 Brassica napus HOM05D001636 ORTHO05D009134 2.8e-07 59.3 117 34.2
Thhalv10019735m.g Eutrema salsugineum HOM05D001456 ORTHO05D009134 2.8e-07 59.3 67 47.8
BcaNung02002 Brassica carinata HOM05D001636 ORTHO05D009134 4.8e-07 58.5 118 33.9
BolC7t44832H Brassica oleracea HOM05D001636 ORTHO05D009134 4.8e-07 58.5 118 33.9
BcaNung02680 Brassica carinata HOM05D001636 ORTHO05D009134 8.2e-07 57.8 116 35.3
A03p51560 Brassica napus HOM05D001636 ORTHO05D009134 1.4e-06 57.0 153 31.4
BolC2t08674H Brassica oleracea HOM05D001636 ORTHO05D009134 1.4e-06 57.0 119 33.6
BolC3t18612H Brassica oleracea HOM05D001636 ORTHO05D009134 1.4e-06 57.0 124 34.7
BolC2t11826H Brassica oleracea HOM05D001636 ORTHO05D009134 2.4e-06 56.2 123 32.5
BcaC03g14330 Brassica carinata HOM05D001636 ORTHO05D009134 3.1e-06 55.8 117 34.2
BcaC03g18165 Brassica carinata HOM05D001636 ORTHO05D009134 4.1e-06 55.5 83 41.0
C02p62340 Brassica napus HOM05D001636 ORTHO05D009134 4.1e-06 55.5 71 43.7
BcaB02g09721 Brassica carinata HOM05D001636 ORTHO05D009134 6.9e-06 54.7 111 33.3
BcaC07g39706 Brassica carinata HOM05D008913 ORTHO05D011317 6.9e-06 54.7 118 33.1
A06p35510 Brassica napus HOM05D001636 ORTHO05D009134 6.9e-06 54.7 131 33.6
C08p28650 Brassica napus HOM05D008913 ORTHO05D011317 6.9e-06 54.7 118 33.1
Carub.0008s0155 Capsella rubella HOM05D001636 ORTHO05D009134 6.9e-06 54.7 110 32.7
BcaC07g39704 Brassica carinata HOM05D008913 ORTHO05D011317 9.1e-06 54.3 129 34.1
BcaC07g39705 Brassica carinata HOM05D008913 ORTHO05D011317 9.1e-06 54.3 129 34.1


User provided reference genes

Program Settings