Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p65950 Brassica napus HOM05D008508 ORTHO05D003325 2.8e-84 315.5 188 100.0
BolC4t28099H Brassica oleracea HOM05D008508 ORTHO05D003325 1.2e-79 300.1 188 95.7
A04p28630 Brassica napus HOM05D008508 ORTHO05D003325 2.6e-69 265.8 189 89.4
BraA04t18340Z Brassica rapa HOM05D008508 ORTHO05D003325 1.7e-68 263.1 190 83.2
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 1.2e-58 230.3 197 69.5
Sp4g19810 Schrenkiella parvula HOM05D008508 ORTHO05D003325 8.6e-57 224.2 196 75.0
BcaB06g28998 Brassica carinata HOM05D008508 ORTHO05D003325 2.3e-54 216.1 152 75.7
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 1.5e-53 213.4 193 75.1
AT2G37480 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 9.8e-53 210.7 196 69.4
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 2.9e-52 209.1 196 68.9
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 2.9e-52 209.1 196 68.9
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 2.9e-52 209.1 196 68.9
Carub.0004s1941 Capsella rubella HOM05D008508 ORTHO05D003325 4.1e-51 205.3 196 67.9
A03p20680 Brassica napus HOM05D008508 ORTHO05D003325 2.0e-50 203.0 197 69.5
BraA03t11309Z Brassica rapa HOM05D008508 ORTHO05D003325 2.0e-50 203.0 197 69.5
AL4G33980 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 1.0e-49 200.7 196 67.3
AL4G33940 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 3.0e-49 199.1 195 69.7
BcaB02g09283 Brassica carinata HOM05D008508 ORTHO05D003325 1.8e-46 189.9 205 66.8
BraA05t19816Z Brassica rapa HOM05D008508 ORTHO05D003325 1.7e-44 183.3 195 66.7
C04p10560 Brassica napus HOM05D008508 ORTHO05D003325 2.2e-44 183.0 196 69.9
BcaC02g11856 Brassica carinata HOM05D008508 ORTHO05D003325 6.4e-44 181.4 196 69.4
BolC4t22647H Brassica oleracea HOM05D008508 ORTHO05D003325 2.4e-43 179.5 201 67.7
A05p08470 Brassica napus HOM05D008508 ORTHO05D003325 3.9e-41 172.2 195 64.6
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 6.6e-41 171.4 201 56.2
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 1.1e-38 164.1 204 51.0
AL5G34640 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 1.2e-37 160.6 212 54.2
AT3G53670 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 3.7e-36 155.6 205 56.1
Thhalv10010719m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 9.2e-35 151.0 213 52.6
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 2.7e-34 149.4 203 54.7
BraA09t40129Z Brassica rapa HOM05D008508 ORTHO05D003325 4.6e-34 148.7 205 54.6
BcaB01g00256 Brassica carinata HOM05D008508 ORTHO05D003325 1.9e-32 143.3 199 54.3
Sp5g08700 Schrenkiella parvula HOM05D008508 ORTHO05D003325 1.9e-32 143.3 211 53.1
A09p46660 Brassica napus HOM05D008508 ORTHO05D003325 1.2e-31 140.6 207 52.7
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 3.1e-30 136.0 207 48.3
BraA07t29860Z Brassica rapa HOM05D008508 ORTHO05D003325 5.2e-30 135.2 202 54.0
BcaC07g39726 Brassica carinata HOM05D008508 ORTHO05D003325 8.9e-30 134.4 214 50.5
C08p28980 Brassica napus HOM05D008508 ORTHO05D003325 8.9e-30 134.4 214 50.5
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 9.9e-29 131.0 112 67.0
BolC8t50501H Brassica oleracea HOM05D008508 ORTHO05D003325 1.9e-27 126.7 212 50.0
BcaB02g07768 Brassica carinata HOM05D008508 ORTHO05D003325 3.5e-26 122.5 201 51.2
A07p21780 Brassica napus HOM05D008508 ORTHO05D003325 1.0e-25 120.9 200 51.0
BcaC02g07532 Brassica carinata HOM05D008508 ORTHO05D003325 8.1e-23 111.3 61 95.1
BolC6t37349H Brassica oleracea HOM05D008508 ORTHO05D003325 1.3e-20 104.0 197 48.2
CARHR163580 Cardamine hirsuta HOM05D008508 ORTHO05D003325 3.8e-20 102.4 239 39.7
BcaC08g44645 Brassica carinata HOM05D008508 ORTHO05D003325 6.4e-20 101.7 198 47.0
THA.LOC104806576 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 2.4e-19 99.8 138 48.6
C06p21610 Brassica napus HOM05D008508 ORTHO05D003325 4.2e-19 99.0 198 46.5
CARHR132130 Cardamine hirsuta HOM05D008508 ORTHO05D003325 5.6e-16 88.6 76 67.1
THA.LOC104824529 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 5.8e-13 78.6 105 44.8
BcaB01g00255 Brassica carinata HOM05D008508 ORTHO05D003325 5.4e-11 72.0 86 62.8
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 1.8e-09 67.0 92 41.3
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 3.9e-09 65.9 164 34.1
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 1.1e-08 64.3 147 42.9
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 1.1e-08 64.3 84 45.2
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.9e-08 63.5 103 39.8
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.3e-08 62.8 55 54.5
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.3e-08 62.8 55 54.5
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 5.6e-08 62.0 91 44.0
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 5.6e-08 62.0 82 46.3
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 5.6e-08 62.0 76 44.7
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 7.4e-08 61.6 50 58.0
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 9.6e-08 61.2 51 62.7
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 9.6e-08 61.2 82 45.1
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 9.6e-08 61.2 92 44.6
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 9.6e-08 61.2 91 47.3
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 1.3e-07 60.8 82 59.8
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.3e-07 60.8 82 45.1
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.3e-07 60.8 82 45.1
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 1.3e-07 60.8 52 57.7
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.6e-07 60.5 49 57.1
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 2.1e-07 60.1 59 54.2
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 2.1e-07 60.1 52 53.8
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 2.1e-07 60.1 62 50.0
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 2.8e-07 59.7 154 31.2
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 2.8e-07 59.7 56 51.8
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.8e-07 59.7 101 37.6
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 3.7e-07 59.3 62 51.6
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 3.7e-07 59.3 63 52.4
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 6.2e-07 58.5 49 57.1
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 6.2e-07 58.5 93 39.8
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 8.1e-07 58.2 59 54.2
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 8.1e-07 58.2 52 55.8
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.1e-07 58.2 48 56.2
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 8.1e-07 58.2 48 56.2
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 8.1e-07 58.2 82 47.6
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.1e-06 57.8 60 46.7
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.1e-06 57.8 91 42.9
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 1.1e-06 57.8 138 34.8
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 1.4e-06 57.4 52 53.8
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.8e-06 57.0 42 61.9
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.8e-06 57.0 88 53.4
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.4e-06 56.6 47 57.4
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 2.4e-06 56.6 48 56.2
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 3.1e-06 56.2 153 35.9
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 4.0e-06 55.8 62 53.2
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 4.0e-06 55.8 160 32.5
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 5.3e-06 55.5 59 52.5
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 5.3e-06 55.5 119 37.0
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 5.3e-06 55.5 63 47.6
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 5.3e-06 55.5 51 58.8
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 6.9e-06 55.1 70 45.7
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 6.9e-06 55.1 82 39.0
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 6.9e-06 55.1 63 42.9
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 6.9e-06 55.1 54 57.4
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 6.9e-06 55.1 65 44.6
AL5G37360 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 9.0e-06 54.7 64 51.6
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 9.0e-06 54.7 52 51.9
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 9.0e-06 54.7 41 56.1


User provided reference genes

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