Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 7.1e-116 420.6 215 100.0
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 7.2e-92 340.9 191 93.2
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 7.2e-92 340.9 191 93.2
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 5.7e-89 331.3 191 90.1
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 5.7e-89 331.3 191 90.1
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.8e-74 283.1 191 79.6
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 2.6e-73 279.3 187 80.2
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 4.5e-62 241.9 194 69.6
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 3.8e-61 238.8 140 85.7
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 2.1e-59 233.0 195 69.2
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.8e-59 232.6 195 68.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 2.2e-56 223.0 194 68.0
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 8.3e-56 221.1 198 65.7
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 7.5e-49 198.0 200 58.5
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 4.0e-42 175.6 149 63.1
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.7e-40 170.2 131 68.7
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 6.4e-40 168.3 132 66.7
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.1e-39 167.5 128 67.2
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 1.4e-39 167.2 151 59.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 5.4e-39 165.2 132 66.7
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.2e-38 164.1 127 66.9
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.2e-38 164.1 127 68.5
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.2e-38 164.1 128 67.2
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.6e-38 163.7 198 51.5
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.6e-38 163.7 127 67.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.6e-38 163.7 127 66.9
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 2.1e-38 163.3 132 65.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.1e-38 163.3 136 64.0
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.7e-38 162.9 135 63.7
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.5e-38 162.5 127 66.1
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 4.6e-38 162.2 127 64.6
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 4.6e-38 162.2 126 68.3
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 4.6e-38 162.2 132 64.4
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.6e-38 162.2 132 65.2
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 4.6e-38 162.2 135 63.7
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.0e-38 161.8 132 65.2
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.0e-38 161.8 132 65.2
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 6.0e-38 161.8 127 65.4
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 7.8e-38 161.4 126 68.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 7.8e-38 161.4 131 65.6
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.7e-37 160.2 127 67.7
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.7e-37 160.2 127 66.1
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 3.0e-37 159.5 127 66.9
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 3.9e-37 159.1 131 65.6
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 5.1e-37 158.7 130 61.5
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 6.6e-37 158.3 131 65.6
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 6.6e-37 158.3 169 55.0
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 8.6e-37 157.9 202 50.0
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 1.1e-36 157.5 127 64.6
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.1e-36 157.5 127 64.6
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.5e-36 157.1 131 63.4
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.9e-36 156.8 127 64.6
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 2.5e-36 156.4 125 65.6
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 3.3e-36 156.0 127 64.6
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 5.6e-36 155.2 127 64.6
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 9.5e-36 154.5 126 65.9
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 9.5e-36 154.5 194 47.9
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 9.5e-36 154.5 132 61.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.6e-35 153.7 127 63.8
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 6.2e-35 151.8 139 61.2
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 6.2e-35 151.8 127 63.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.1e-34 151.0 131 61.1
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.4e-34 150.6 128 61.7
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.4e-34 150.6 203 45.8
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.4e-34 150.6 123 66.7
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.8e-34 150.2 132 61.4
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.8e-34 150.2 128 61.7
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 2.3e-34 149.8 134 59.7
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 3.1e-34 149.4 130 60.8
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 4.0e-34 149.1 132 59.8
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 6.8e-34 148.3 126 62.7
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 6.8e-34 148.3 126 62.7
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 8.9e-34 147.9 126 62.7
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.2e-33 147.5 128 60.9
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.0e-33 146.7 127 59.8
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 4.4e-33 145.6 128 59.4
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 5.8e-33 145.2 118 65.3
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 9.9e-33 144.4 127 60.6
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.1e-31 141.0 194 49.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.4e-31 140.6 195 48.2
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 5.4e-31 138.7 127 58.3
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 5.4e-31 138.7 127 58.3
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 9.2e-31 137.9 128 60.2
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.3e-29 134.0 126 59.5
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.9e-29 132.5 170 48.8
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.6e-27 125.9 128 55.5
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.2e-24 116.7 132 52.3
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 4.9e-24 115.5 127 52.0
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 5.4e-23 112.1 127 51.2
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 9.3e-23 111.3 128 50.0
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 9.3e-23 111.3 128 50.0
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.5e-22 109.4 130 49.2
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.0e-21 107.8 131 49.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.1e-20 104.4 124 47.6
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.8e-19 99.8 83 62.7
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.2e-19 98.6 83 62.7
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.4e-18 97.4 127 45.7
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.3e-16 90.9 74 63.5
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 1.3e-16 90.9 132 41.7
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.7e-16 90.5 74 59.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 4.9e-16 89.0 74 58.1
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.4e-15 87.4 76 61.8


User provided reference genes

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