Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p65090 Brassica napus HOM05D001280 ORTHO05D001125 5.4e-84 314.3 160 100.0
BcaC02g07638 Brassica carinata HOM05D001280 ORTHO05D001125 9.5e-73 276.9 142 100.0
A04p27590 Brassica napus HOM05D001280 ORTHO05D001125 9.5e-73 276.9 142 100.0
BolC4t27987H Brassica oleracea HOM05D001280 ORTHO05D001125 9.5e-73 276.9 142 100.0
BraA04t18254Z Brassica rapa HOM05D001280 ORTHO05D001125 9.5e-73 276.9 142 100.0
BcaB06g28908 Brassica carinata HOM05D001280 ORTHO05D001125 3.4e-70 268.5 142 96.5
BcaB01g03861 Brassica carinata HOM05D001280 ORTHO05D001125 1.3e-66 256.5 142 92.3
Sp4g18280 Schrenkiella parvula HOM05D001280 ORTHO05D001125 9.8e-62 240.4 142 88.7
A03p19920 Brassica napus HOM05D001280 ORTHO05D001125 8.3e-61 237.3 142 88.0
BraA03t11243Z Brassica rapa HOM05D001280 ORTHO05D001125 8.3e-61 237.3 142 88.0
AL4G32120 Arabidopsis lyrata HOM05D001280 ORTHO05D001125 4.1e-60 235.0 142 85.9
Thhalv10017124m.g Eutrema salsugineum HOM05D001280 ORTHO05D001125 1.6e-59 233.0 142 86.6
A05p09800 Brassica napus HOM05D001280 ORTHO05D001125 1.3e-58 229.9 142 85.9
BraA05t19932Z Brassica rapa HOM05D001280 ORTHO05D001125 1.3e-58 229.9 142 85.9
AT2G36020 Arabidopsis thaliana HOM05D001280 ORTHO05D001125 3.0e-58 228.8 142 83.8
BcaC02g11703 Brassica carinata HOM05D001280 ORTHO05D001125 2.5e-57 225.7 142 84.5
C04p12160 Brassica napus HOM05D001280 ORTHO05D001125 2.5e-57 225.7 142 84.5
Carub.0004s1777 Capsella rubella HOM05D001280 ORTHO05D001125 9.5e-57 223.8 142 81.7
BolC4t22860H Brassica oleracea HOM05D001280 ORTHO05D001125 1.4e-55 219.9 142 83.1
CARHR130280 Cardamine hirsuta HOM05D001280 ORTHO05D001125 7.5e-54 214.2 144 79.2
BolC3t14732H Brassica oleracea HOM05D001280 ORTHO05D001125 1.2e-46 190.3 142 74.6
BcaB02g09390 Brassica carinata HOM05D001280 ORTHO05D001125 5.8e-46 188.0 142 73.2
THA.LOC104799750 Tarenaya hassleriana HOM05D001280 ORTHO05D001125 8.4e-37 157.5 151 60.3
Aa31LG5G21160 Aethionema arabicum HOM05D001280 ORTHO05D001125 1.3e-34 150.2 142 64.1
BcaC01g05676 Brassica carinata HOM05D001280 ORTHO05D001125 3.3e-33 145.6 88 86.4
C03p23320 Brassica napus HOM05D001280 ORTHO05D001125 3.3e-33 145.6 88 86.4
Cpa.g.sc104.61 Carica papaya HOM05D001280 ORTHO05D001125 1.2e-11 73.9 154 35.7


User provided reference genes

Program Settings