Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p64840 Brassica napus HOM05D005113 ORTHO05D006045 1.4e-39 166.0 94 100.0
BcaC02g07662 Brassica carinata HOM05D005113 ORTHO05D006045 8.7e-34 146.7 94 93.6
BolC4t27961H Brassica oleracea HOM05D005113 ORTHO05D006045 2.5e-33 145.2 94 92.6
A04p27340 Brassica napus HOM05D005113 ORTHO05D006045 3.2e-28 128.3 90 80.0
BraA04t18232Z Brassica rapa HOM05D005113 ORTHO05D006045 1.3e-26 122.9 90 81.1
BcaB06g28884 Brassica carinata HOM05D005113 ORTHO05D006045 2.0e-22 109.0 92 76.1
BcaB01g03875 Brassica carinata HOM05D005113 ORTHO05D006045 7.1e-20 100.5 89 76.4
AL4G31960 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 7.9e-19 97.1 93 63.4
A03p19780 Brassica napus HOM05D005113 ORTHO05D006045 2.3e-18 95.5 89 71.9
C03p23070 Brassica napus HOM05D005113 ORTHO05D006045 2.3e-18 95.5 89 71.9
BraA03t11230Z Brassica rapa HOM05D005113 ORTHO05D006045 2.3e-18 95.5 89 71.9
BcaC01g05698 Brassica carinata HOM05D005113 ORTHO05D006045 6.7e-18 94.0 89 70.8
BolC3t14709H Brassica oleracea HOM05D005113 ORTHO05D006045 6.7e-18 94.0 89 70.8
Carub.0004s1761 Capsella rubella HOM05D005113 ORTHO05D006045 3.7e-16 88.2 82 64.6
CARHR130110 Cardamine hirsuta HOM05D005113 ORTHO05D006045 3.7e-16 88.2 89 62.9
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 4.1e-15 84.7 86 57.0
AT2G35850 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 1.2e-14 83.2 87 64.4
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 5.9e-14 80.9 86 57.0
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 1.0e-13 80.1 86 55.8
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 1.3e-13 79.7 86 55.8
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 1.3e-13 79.7 86 55.8
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 1.3e-13 79.7 86 55.8
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 1.3e-13 79.7 86 55.8
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 1.3e-13 79.7 86 55.8
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 1.3e-13 79.7 86 55.8
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 2.9e-13 78.6 91 52.7
BcaC07g39601 Brassica carinata HOM05D005113 ORTHO05D006045 3.8e-13 78.2 85 55.3
C08p27550 Brassica napus HOM05D005113 ORTHO05D006045 3.8e-13 78.2 85 55.3
BolC8t50376H Brassica oleracea HOM05D005113 ORTHO05D006045 3.8e-13 78.2 85 55.3
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 5.0e-13 77.8 85 55.3
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 8.5e-13 77.0 79 55.7
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 8.5e-13 77.0 79 55.7
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 1.9e-12 75.9 79 55.7
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 1.9e-12 75.9 79 55.7
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 3.2e-12 75.1 84 52.4
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 4.2e-12 74.7 84 54.8
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 7.2e-12 73.9 88 51.1
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 3.6e-11 71.6 81 53.1
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 6.1e-11 70.9 96 49.0
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 1.4e-10 69.7 81 53.1
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 1.8e-10 69.3 78 51.3
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 1.8e-10 69.3 74 56.8
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 1.8e-10 69.3 81 51.9
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 3.9e-10 68.2 89 50.6
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 6.7e-10 67.4 79 50.6
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 8.8e-10 67.0 79 51.9
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.5e-09 66.2 83 51.8
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 2.5e-09 65.5 81 49.4
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 4.3e-09 64.7 78 48.7
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 4.3e-09 64.7 82 50.0
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 4.3e-09 64.7 81 50.6
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 4.3e-09 64.7 85 45.9
Sp4g18110 Schrenkiella parvula HOM05D005113 ORTHO05D006045 5.7e-09 64.3 39 87.2
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 5.7e-09 64.3 84 48.8
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 5.7e-09 64.3 89 47.2
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 1.3e-08 63.2 82 50.0
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 1.3e-08 63.2 99 43.4
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 1.3e-08 63.2 81 48.1
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.7e-08 62.8 86 47.7
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 2.2e-08 62.4 74 52.7
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 2.2e-08 62.4 74 51.4
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 2.8e-08 62.0 78 52.6
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 3.7e-08 61.6 77 46.8
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 3.7e-08 61.6 77 48.1
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 3.7e-08 61.6 88 46.6
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 4.8e-08 61.2 80 50.0
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.8e-08 61.2 82 48.8
BraA09t40003Z Brassica rapa HOM05D005113 ORTHO05D006045 8.2e-08 60.5 89 48.3
Thhalv10017703m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 1.1e-07 60.1 48 72.9
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 1.1e-07 60.1 82 51.2
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 1.8e-07 59.3 80 50.0
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.4e-07 58.9 82 50.0
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 2.4e-07 58.9 85 47.1
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 3.1e-07 58.5 82 48.8
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 3.1e-07 58.5 80 50.0
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 5.3e-07 57.8 90 46.7
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 6.9e-07 57.4 89 43.8
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 9.1e-07 57.0 89 47.2
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 1.5e-06 56.2 77 46.8
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 2.0e-06 55.8 78 47.4
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 2.0e-06 55.8 83 44.6
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 2.0e-06 55.8 83 44.6
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.6e-06 55.5 98 42.9
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.6e-06 55.5 98 42.9
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.6e-06 55.5 78 41.0
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.6e-06 55.5 83 47.0
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 2.6e-06 55.5 77 45.5
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 2.6e-06 55.5 78 44.9
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 2.6e-06 55.5 98 40.8
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.5e-06 54.7 100 42.0
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.5e-06 54.7 98 42.9
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 5.9e-06 54.3 84 46.4
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 5.9e-06 54.3 74 44.6
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 7.7e-06 53.9 78 48.7
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 7.7e-06 53.9 91 40.7
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 7.7e-06 53.9 91 40.7


User provided reference genes

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