Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p64500 Brassica napus HOM05D009099 ORTHO05D042737 1.2e-130 469.9 248 100.0
BolC4t27932H Brassica oleracea HOM05D009099 ORTHO05D042737 1.2e-130 469.9 248 100.0
BolC4t27930H Brassica oleracea HOM05D009099 ORTHO05D013788 5.1e-57 225.3 191 69.6
A04p27080 Brassica napus HOM05D009099 ORTHO05D013788 1.5e-56 223.8 187 70.1
C04p64470 Brassica napus HOM05D009099 ORTHO05D013788 2.6e-53 213.0 203 64.0
BcaC02g07695 Brassica carinata HOM05D009099 ORTHO05D013788 4.8e-47 192.2 169 68.6
BraA04t18206Z Brassica rapa HOM05D009099 ORTHO05D013788 2.0e-37 160.2 123 74.8
BcaB06g28854 Brassica carinata HOM05D009099 ORTHO05D013788 3.3e-32 142.9 189 52.4
BolC4t27937H Brassica oleracea HOM05D009099 ORTHO05D021936 2.4e-30 136.7 185 47.6
C04p64580 Brassica napus HOM05D009099 ORTHO05D021936 4.0e-30 136.0 185 47.0
A04p27100 Brassica napus HOM05D009099 ORTHO05D021936 6.9e-30 135.2 185 47.0
BraA04t18209Z Brassica rapa HOM05D009099 ORTHO05D021936 6.9e-30 135.2 185 47.0
BcaC02g07690 Brassica carinata HOM05D009099 ORTHO05D021936 9.0e-30 134.8 185 47.6
C04p64550 Brassica napus HOM05D009099 ORTHO05D021936 9.0e-30 134.8 185 47.6
BcaC02g07687 Brassica carinata HOM05D009099 ORTHO05D000512 1.2e-29 134.4 182 47.3
C04p64490 Brassica napus HOM05D009099 ORTHO05D013788 3.9e-25 119.4 189 43.9
C04p64530 Brassica napus HOM05D009099 ORTHO05D013788 3.9e-25 119.4 189 43.9
BolC4t27931H Brassica oleracea HOM05D009099 ORTHO05D013788 2.2e-23 113.6 204 40.7
BraA04t18207Z Brassica rapa HOM05D009099 ORTHO05D013788 2.2e-23 113.6 187 41.7
BcaC08g44239 Brassica carinata HOM05D009099 ORTHO05D013788 2.8e-23 113.2 187 42.2
BcaC02g07692 Brassica carinata HOM05D009099 ORTHO05D014276 3.7e-23 112.8 191 41.9
BolC4t27935H Brassica oleracea HOM05D009099 ORTHO05D013788 4.8e-23 112.5 184 42.9
BcaC02g07694 Brassica carinata HOM05D009099 ORTHO05D013788 4.1e-22 109.4 209 38.8
A01p29690 Brassica napus HOM05D009099 ORTHO05D013788 1.5e-21 107.5 190 42.1
BraA01t03096Z Brassica rapa HOM05D009099 ORTHO05D013788 1.5e-21 107.5 190 42.1
BcaB06g28888 Brassica carinata HOM05D000209 ORTHO05D000129 4.8e-15 85.9 45 91.1
BraA04t18234Z Brassica rapa HOM05D000209 ORTHO05D000129 9.1e-14 81.6 46 91.3
AL3G29470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.5e-13 79.3 49 79.6
C03p23110 Brassica napus HOM05D000209 ORTHO05D000129 5.9e-13 79.0 45 80.0
Thhalv10022412m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.7e-13 78.6 45 82.2
AT3G16580 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.0e-12 78.2 47 78.7
Thhalv10021923m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.0e-12 78.2 46 78.3
A04p27360 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-12 77.8 46 87.0
Thhalv10009548m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.2e-12 77.0 45 82.2
Thhalv10022086m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.2e-12 77.0 45 80.0
BcaC01g05695 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-12 76.6 45 77.8
C03p23130 Brassica napus HOM05D000209 ORTHO05D000129 2.9e-12 76.6 45 80.0
BolC3t14712H Brassica oleracea HOM05D000209 ORTHO05D000129 2.9e-12 76.6 45 77.8
BcaC02g07658 Brassica carinata HOM05D000209 ORTHO05D000129 6.5e-12 75.5 45 80.0
C04p64900 Brassica napus HOM05D000209 ORTHO05D000129 6.5e-12 75.5 45 80.0
BolC4t27963H Brassica oleracea HOM05D000209 ORTHO05D000129 6.5e-12 75.5 45 80.0
BcaC05g28863 Brassica carinata HOM05D000209 ORTHO05D000129 8.5e-12 75.1 44 79.5
A03p19810 Brassica napus HOM05D000209 ORTHO05D000129 8.5e-12 75.1 45 77.8
Carub.0003s1631 Capsella rubella HOM05D000209 ORTHO05D000129 8.5e-12 75.1 45 77.8
Sp5g16370 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.4e-11 74.3 45 80.0
BcaB06g28855 Brassica carinata HOM05D009099 ORTHO05D013788 1.9e-11 73.9 61 68.9
A05p32950 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-11 73.9 44 79.5
BraA05t22120Z Brassica rapa HOM05D000209 ORTHO05D000129 1.9e-11 73.9 44 79.5
AT2G14710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.5e-11 73.6 49 73.5
Sp1g27690 Schrenkiella parvula HOM05D000209 ORTHO05D000129 3.2e-11 73.2 45 75.6
CARHR091810 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.2e-11 72.8 45 73.3
BcaB06g25761 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-11 72.4 48 66.7
BcaC05g28867 Brassica carinata HOM05D000209 ORTHO05D000129 7.2e-11 72.0 44 81.8
C05p49730 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-11 72.0 44 81.8
Carub.0001s3616 Capsella rubella HOM05D000209 ORTHO05D000129 7.2e-11 72.0 44 77.3
CARHR091790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.2e-11 72.0 48 77.1
AL1G53610 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-10 71.2 47 74.5
Thhalv10017596m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.1e-10 70.5 53 60.4
C03p54750 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-10 70.1 45 71.1
BcaC01g05693 Brassica carinata HOM05D000209 ORTHO05D000129 4.7e-10 69.3 37 86.5
BcaC02g07659 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-10 68.9 45 75.6
C04p64880 Brassica napus HOM05D000209 ORTHO05D000129 6.1e-10 68.9 45 75.6
BolC5t33724H Brassica oleracea HOM05D000209 ORTHO05D000129 6.1e-10 68.9 44 79.5
Carub.0003s2658 Capsella rubella HOM05D000209 ORTHO05D000129 1.0e-09 68.2 45 75.6
Carub.0003s2661 Capsella rubella HOM05D000209 ORTHO05D000129 1.0e-09 68.2 45 75.6
A09p34140 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-09 67.4 49 69.4
BolC5t31864H Brassica oleracea HOM05D000209 ORTHO05D000129 1.8e-09 67.4 49 69.4
CARHR031880 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.3e-09 67.0 44 68.2
AL1G46640 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-09 66.6 46 65.2
Carub.0003s2850 Capsella rubella HOM05D000209 ORTHO05D000129 3.0e-09 66.6 49 65.3
Carub.0003s2868 Capsella rubella HOM05D000209 ORTHO05D000129 3.0e-09 66.6 49 63.3
AT1G32430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.9e-09 66.2 45 64.4
BcaC05g27228 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-09 66.2 49 67.3
A05p38600 Brassica napus HOM05D000209 ORTHO05D000129 3.9e-09 66.2 46 65.2
BraA05t22651Z Brassica rapa HOM05D000209 ORTHO05D000129 3.9e-09 66.2 46 65.2
AT1G47390 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.1e-09 65.9 43 72.1
C05p57490 Brassica napus HOM05D000209 ORTHO05D000129 5.1e-09 65.9 46 65.2
AL1G46660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-09 65.5 45 66.7
AL8G22710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-09 65.5 45 73.3
BolC3t14714H Brassica oleracea HOM05D000209 ORTHO05D000129 6.7e-09 65.5 45 73.3
Carub.0003s2860 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-09 65.5 47 68.1
Carub.0003s2861 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-09 65.5 47 68.1
Carub.0003s2873 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-09 65.5 47 68.1
Carub.0001s3084 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-08 64.7 49 61.2
Carub.0003s2859 Capsella rubella HOM05D000209 ORTHO05D000129 1.5e-08 64.3 47 63.8
BcaB07g32863 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-08 63.9 46 65.2
Carub.0003s2875 Capsella rubella HOM05D000209 ORTHO05D000129 2.0e-08 63.9 44 68.2
Carub.0003s2862 Capsella rubella HOM05D000209 ORTHO05D000129 5.7e-08 62.4 47 66.0
BcaB07g32865 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-07 60.8 47 66.0
CARHR036380 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-07 60.8 47 66.0
Thhalv10009774m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.7e-07 59.7 42 71.4
A09p34150 Brassica napus HOM05D000209 ORTHO05D000129 4.8e-07 59.3 44 63.6
BraA09t38965Z Brassica rapa HOM05D000209 ORTHO05D000129 4.8e-07 59.3 44 63.6
Carub.0001s3085 Capsella rubella HOM05D000209 ORTHO05D000129 6.3e-07 58.9 48 58.3
CARHR031310 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.3e-07 58.9 43 69.8
AL3G46410 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.2e-07 58.5 49 61.2
BcaC05g29450 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 57.8 83 41.0
C05p31410 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-06 57.8 43 62.8
C05p57500 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-06 57.8 83 41.0
BolC5t31863H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 57.8 43 62.8
BolC5t34407H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 57.8 83 41.0
A05p38610 Brassica napus HOM05D000209 ORTHO05D000129 5.3e-06 55.8 83 41.0
BraA05t22652Z Brassica rapa HOM05D000209 ORTHO05D000129 5.3e-06 55.8 83 41.0
BcaC05g29449 Brassica carinata HOM05D000209 ORTHO05D000129 7.0e-06 55.5 48 56.2
BcaNung06520 Brassica carinata HOM05D000209 ORTHO05D000129 7.0e-06 55.5 48 56.2


User provided reference genes

Program Settings