Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.1e-219 765.4 387 100.0
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 2.5e-212 741.9 389 97.9
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.2e-211 739.6 388 96.9
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 4.7e-211 737.6 389 96.9
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 2.3e-205 718.8 384 94.5
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.2e-198 696.4 393 90.1
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 3.0e-197 691.8 393 90.1
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 8.7e-197 690.3 393 90.1
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 8.1e-195 683.7 392 89.5
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 3.1e-194 681.8 388 89.7
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 4.9e-192 674.5 392 88.3
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 6.3e-171 604.4 307 99.0
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.1e-159 567.0 385 77.4
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.4e-146 523.5 385 70.6
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.3e-136 490.3 355 70.1
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 7.2e-135 484.6 336 71.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 2.8e-134 482.6 356 69.7
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 4.7e-134 481.9 336 71.1
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 6.1e-134 481.5 336 71.1
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.0e-133 480.7 319 74.0
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.7e-131 472.2 315 73.7
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 6.3e-131 471.5 315 73.7
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.1e-130 470.7 374 65.2
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.4e-130 470.3 341 69.5
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 3.1e-130 469.2 350 68.0
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 2.7e-129 466.1 317 72.6
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 4.5e-129 465.3 328 68.0
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 4.5e-129 465.3 329 69.6
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.0e-128 464.2 321 71.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.9e-128 462.6 323 69.0
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 5.0e-128 461.8 309 73.5
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.1e-127 460.7 319 69.9
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.3e-127 459.1 321 72.3
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 7.3e-127 458.0 316 70.3
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 7.3e-127 458.0 316 70.3
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 7.3e-127 458.0 341 68.0
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.3e-127 458.0 323 68.4
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 9.5e-127 457.6 324 70.1
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.2e-126 457.2 336 68.2
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.1e-126 454.9 323 67.8
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 8.0e-126 454.5 334 66.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.4e-125 453.8 307 70.7
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.4e-125 453.8 324 67.6
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.8e-125 453.4 312 70.2
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 4.4e-124 448.7 314 68.2
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 5.8e-124 448.4 314 68.5
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.3e-123 447.2 340 65.3
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.3e-123 447.2 389 59.4
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.4e-123 444.9 358 62.3
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.1e-122 444.1 307 69.4
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 3.2e-122 442.6 380 59.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 7.0e-122 441.4 319 66.8
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.2e-121 440.7 313 68.4
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 1.2e-121 440.7 326 67.5
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.7e-121 439.5 381 59.3
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 3.5e-121 439.1 375 60.5
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 3.5e-121 439.1 314 67.2
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 8.6e-120 434.5 383 59.8
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.5e-119 433.0 387 57.6
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 2.5e-119 433.0 316 65.2
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 5.6e-119 431.8 316 64.9
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 5.6e-119 431.8 316 64.9
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 6.2e-118 428.3 324 63.6
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.4e-117 427.2 310 68.1
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 3.1e-117 426.0 334 64.7
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 5.2e-117 425.2 310 67.7
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 6.8e-117 424.9 359 59.1
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 1.2e-116 424.1 329 65.3
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.6e-116 422.9 350 60.6
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 7.5e-116 421.4 321 64.8
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 3.7e-115 419.1 298 68.8
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.4e-114 417.2 323 63.2
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 3.2e-114 416.0 302 67.2
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 6.6e-112 408.3 318 62.6
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 3.3e-111 406.0 343 61.2
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 4.3e-111 405.6 322 64.0
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 1.6e-110 403.7 301 64.5
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 3.6e-110 402.5 312 64.4
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 1.1e-109 401.0 298 66.8
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 3.7e-107 392.5 370 54.9
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 8.3e-107 391.3 310 61.6
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-106 391.0 282 67.7
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 3.5e-105 386.0 318 61.0
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 3.5e-105 386.0 288 65.3
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.3e-104 384.0 315 60.3
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 3.9e-104 382.5 339 55.8
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 4.7e-102 375.6 320 60.3
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.1e-101 374.4 382 53.1
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.8e-101 373.6 290 63.4
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.5e-100 370.5 272 67.6
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 6.4e-99 365.2 356 54.2
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.4e-98 364.0 335 57.9
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 7.8e-97 358.2 291 61.9
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.6e-92 343.2 312 58.3
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.2e-91 340.1 277 60.6
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 4.9e-91 339.0 291 58.8
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 9.3e-90 334.7 327 55.0
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 9.3e-90 334.7 225 71.1
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 6.0e-89 332.0 304 55.3
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 2.9e-83 313.2 515 39.6
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 4.2e-82 309.3 358 46.1
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 4.5e-76 289.3 263 56.3
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 9.3e-74 281.6 304 47.4
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 1.5e-71 274.2 304 45.7
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.5e-71 274.2 316 43.4
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.7e-67 260.8 207 64.3
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 9.3e-66 255.0 178 75.8
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.1e-61 241.5 154 76.0
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.5e-60 236.1 199 61.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.2e-59 233.8 222 62.6
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 5.0e-59 232.6 200 59.5
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 2.4e-53 213.8 174 69.5
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 4.1e-53 213.0 176 68.2
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.3e-46 191.4 173 55.5
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.2e-43 180.6 226 44.2
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.4e-40 171.4 133 60.9
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 4.8e-38 162.9 129 59.7
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 2.7e-33 147.1 179 48.0
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 8.3e-30 135.6 112 60.7
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 8.3e-30 135.6 202 34.7
BcaC02g07709 Brassica carinata HOM05D006137 ORTHO05D007697 3.1e-29 133.7 86 83.7
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.9e-27 127.1 86 74.4
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 5.0e-27 126.3 126 54.8
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 7.5e-23 112.5 198 33.3
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 6.6e-19 99.4 100 62.0
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 5.5e-18 96.3 46 93.5
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 5.5e-18 96.3 46 93.5
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 7.3e-10 69.3 204 26.0
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 6.1e-09 66.2 31 90.3
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.4e-08 65.1 149 34.2
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 1.5e-07 61.6 170 27.1
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.4e-07 60.5 167 30.5
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 5.8e-07 59.7 119 34.5
CBR_g50831 Chara braunii HOM05D001789 ORTHO05D001755 8.3e-06 55.8 89 39.3


User provided reference genes

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