Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 9.7e-40 166.4 86 100.0
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 9.7e-40 166.4 86 100.0
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 9.7e-40 166.4 86 100.0
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 9.7e-40 166.4 86 100.0
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 1.0e-36 156.4 86 96.5
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 2.7e-34 148.3 86 90.7
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 6.5e-28 127.1 87 80.5
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 6.5e-28 127.1 87 78.2
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 3.2e-27 124.8 86 79.1
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 1.2e-26 122.9 86 77.9
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 2.1e-26 122.1 86 79.1
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 3.0e-25 118.2 87 74.7
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 8.8e-25 116.7 93 69.9
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 3.5e-21 104.8 90 67.8
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 7.7e-21 103.6 86 66.3
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 2.2e-20 102.1 89 65.2
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 1.5e-19 99.4 84 63.1
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 1.9e-19 99.0 86 64.0
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 2.5e-19 98.6 86 61.6
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 3.2e-19 98.2 86 61.6
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 3.2e-19 98.2 88 64.8
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 4.2e-19 97.8 86 61.6
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 5.5e-19 97.4 86 61.6
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 5.5e-19 97.4 86 59.3
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 7.2e-19 97.1 81 64.2
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 9.4e-19 96.7 79 64.6
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 9.4e-19 96.7 69 71.0
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 1.2e-18 96.3 82 64.6
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.2e-18 96.3 85 64.7
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 1.6e-18 95.9 92 64.1
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 1.6e-18 95.9 86 62.8
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 2.1e-18 95.5 87 62.1
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 2.1e-18 95.5 88 58.0
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 2.7e-18 95.1 85 63.5
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 6.1e-18 94.0 87 62.1
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 6.1e-18 94.0 79 65.8
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 8.0e-18 93.6 65 67.7
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 8.0e-18 93.6 84 65.5
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 8.0e-18 93.6 87 63.2
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 1.4e-17 92.8 84 65.5
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.8e-17 92.4 76 64.5
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.8e-17 92.4 62 74.2
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.8e-17 92.4 51 80.4
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.3e-17 92.0 50 84.0
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 2.3e-17 92.0 89 56.2
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 3.0e-17 91.7 84 60.7
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 3.0e-17 91.7 69 66.7
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 3.0e-17 91.7 79 65.8
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 4.0e-17 91.3 75 68.0
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 5.2e-17 90.9 76 65.8
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 6.8e-17 90.5 86 60.5
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 6.8e-17 90.5 87 57.5
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 8.8e-17 90.1 92 59.8
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 8.8e-17 90.1 86 59.3
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 1.2e-16 89.7 67 64.2
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.5e-16 89.4 79 64.6
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 1.5e-16 89.4 88 59.1
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 1.5e-16 89.4 48 85.4
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 1.5e-16 89.4 48 85.4
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 1.5e-16 89.4 86 59.3
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 2.0e-16 89.0 92 57.6
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 2.0e-16 89.0 86 58.1
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 2.6e-16 88.6 46 91.3
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 2.6e-16 88.6 62 72.6
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 3.4e-16 88.2 85 62.4
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.4e-16 87.8 48 83.3
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.4e-16 87.8 48 83.3
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.4e-16 87.8 48 83.3
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 4.4e-16 87.8 86 58.1
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 4.4e-16 87.8 86 57.0
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 5.7e-16 87.4 86 59.3
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 7.5e-16 87.0 65 67.7
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 1.3e-15 86.3 85 56.5
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.7e-15 85.9 86 59.3
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 2.8e-15 85.1 69 62.3
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 2.8e-15 85.1 92 55.4
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 3.7e-15 84.7 65 64.6
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.8e-15 84.3 86 59.3
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.8e-15 84.3 54 72.2
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 6.3e-15 84.0 58 72.4
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 6.3e-15 84.0 48 75.0
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 1.1e-14 83.2 88 54.5
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 1.4e-14 82.8 71 57.7
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.4e-14 82.8 80 57.5
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 3.1e-14 81.6 86 53.5
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 4.1e-14 81.3 50 74.0
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 7.0e-14 80.5 86 52.3
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 7.0e-14 80.5 81 55.6
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 9.1e-14 80.1 46 78.3
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 1.6e-13 79.3 81 58.0
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 7.7e-13 77.0 76 53.9
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.3e-12 76.3 57 63.2
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 9.5e-11 70.1 49 63.3
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 3.0e-09 65.1 75 49.3
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 1.1e-06 56.6 29 75.9
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 2.4e-06 55.5 55 49.1
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 2.4e-06 55.5 49 46.9


User provided reference genes

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