Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 3.2e-153 545.0 276 100.0
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 1.8e-151 539.3 277 99.3
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 4.8e-149 531.2 276 98.2
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 1.1e-148 530.0 276 97.5
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 2.0e-142 509.2 277 93.5
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 2.2e-141 505.8 276 93.1
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 2.2e-141 505.8 259 95.0
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 4.8e-141 504.6 261 93.9
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 3.5e-139 498.4 278 92.8
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 7.7e-139 497.3 262 93.5
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 2.2e-138 495.7 277 92.4
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 5.5e-137 491.1 277 90.6
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 1.4e-135 486.5 250 92.8
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 5.2e-135 484.6 250 92.0
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 8.8e-135 483.8 250 92.4
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 3.3e-134 481.9 250 91.6
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 9.7e-134 480.3 255 91.0
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 9.7e-134 480.3 249 92.8
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 2.2e-133 479.2 250 91.6
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 4.8e-133 478.0 259 89.6
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 6.3e-133 477.6 250 90.8
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 8.2e-133 477.2 249 91.2
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 1.1e-132 476.9 251 90.4
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 1.8e-132 476.1 250 90.8
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 3.1e-132 475.3 255 90.2
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 5.3e-132 474.6 256 88.7
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 5.3e-132 474.6 255 90.6
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 5.3e-132 474.6 249 91.6
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 5.3e-132 474.6 254 90.6
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 7.0e-132 474.2 249 91.2
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 7.0e-132 474.2 248 91.5
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 9.1e-132 473.8 259 88.0
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.2e-131 473.4 250 90.4
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.2e-131 473.4 250 90.0
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.6e-131 473.0 252 90.5
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 1.6e-131 473.0 252 89.7
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 1.6e-131 473.0 254 90.2
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 2.7e-131 472.2 254 89.8
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 3.5e-131 471.9 252 89.7
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 3.5e-131 471.9 252 89.7
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 5.9e-131 471.1 249 91.6
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 7.7e-131 470.7 255 88.2
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 1.0e-130 470.3 249 89.6
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 1.3e-130 469.9 252 89.3
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 1.7e-130 469.5 248 91.1
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.7e-130 469.5 252 89.3
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.7e-130 469.5 249 90.0
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 1.7e-130 469.5 252 90.1
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.2e-130 469.2 250 90.4
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.2e-130 469.2 250 90.4
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 2.9e-130 468.8 248 91.1
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 2.9e-130 468.8 249 90.0
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.9e-130 468.8 249 90.0
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 2.9e-130 468.8 263 86.3
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.8e-130 468.4 252 89.7
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 5.0e-130 468.0 249 89.2
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 5.0e-130 468.0 252 88.9
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 8.5e-130 467.2 249 89.6
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 1.1e-129 466.8 250 89.6
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.5e-129 466.5 253 89.7
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 2.5e-129 465.7 252 88.1
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 3.2e-129 465.3 255 87.8
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 3.2e-129 465.3 249 90.4
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 4.2e-129 464.9 251 88.0
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 5.5e-129 464.5 250 88.0
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 7.2e-129 464.2 250 89.6
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 9.4e-129 463.8 251 88.4
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.2e-128 463.4 251 87.6
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.6e-128 463.0 248 90.7
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 2.1e-128 462.6 251 89.6
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 2.1e-128 462.6 249 89.6
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 2.7e-128 462.2 250 88.8
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 3.6e-128 461.8 244 91.4
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 3.6e-128 461.8 248 90.3
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 3.6e-128 461.8 249 89.6
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 6.1e-128 461.1 252 88.1
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 8.0e-128 460.7 249 88.8
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 1.0e-127 460.3 246 88.6
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 1.8e-127 459.5 249 89.2
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 2.3e-127 459.1 273 82.8
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 4.0e-127 458.4 255 89.0
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 1.2e-126 456.8 255 87.1
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 2.6e-126 455.7 246 88.6
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 4.4e-126 454.9 249 88.0
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 5.7e-126 454.5 245 90.2
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.2e-125 452.6 247 88.3
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 6.3e-125 451.1 248 87.1
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 7.0e-124 447.6 251 86.9
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 5.5e-121 438.0 248 83.5
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 5.5e-121 438.0 247 85.8
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 1.2e-120 436.8 254 85.0
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 1.4e-119 433.3 290 80.7
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 2.3e-119 432.6 233 91.0
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 7.5e-118 427.6 250 81.6
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 2.4e-116 422.5 247 81.0
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 3.1e-116 422.2 347 64.6
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 4.1e-116 421.8 228 89.9
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 3.5e-115 418.7 251 82.1
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 2.9e-114 415.6 242 82.2
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 4.9e-109 398.3 246 76.4
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 2.5e-105 386.0 217 87.6
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 1.5e-97 360.1 191 92.1
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 9.9e-94 347.4 190 88.9
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 1.3e-93 347.1 256 66.8
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 8.1e-88 327.8 171 92.4
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 1.1e-87 327.4 183 90.7
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 2.4e-87 326.2 171 91.2
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 1.1e-84 317.4 181 86.2
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 7.1e-84 314.7 168 91.1
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.5e-81 307.0 162 90.7
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 5.4e-76 288.5 185 75.7
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 2.1e-75 286.6 147 98.0
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 7.8e-75 284.6 145 97.9
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 7.8e-75 284.6 155 94.2
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.1e-74 282.0 164 85.4
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 1.1e-73 280.8 155 92.9
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.6e-73 278.5 164 82.9
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.6e-72 276.9 164 84.1
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.2e-67 260.8 171 75.4
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.1e-67 260.0 213 66.2
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 1.5e-65 253.8 142 85.9
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 7.4e-65 251.5 156 79.5
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 5.5e-60 235.3 148 79.1
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 1.9e-52 210.3 191 55.5
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.6e-51 207.2 151 71.5
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 2.1e-51 206.8 141 74.5
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 8.2e-40 168.3 167 56.9
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 2.4e-39 166.8 93 84.9
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 4.1e-31 139.4 76 90.8
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 1.9e-28 130.6 194 44.8
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 3.0e-26 123.2 71 84.5
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 6.7e-26 122.1 64 87.5
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 2.8e-24 116.7 93 62.4
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 2.9e-21 106.7 55 89.1
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 8.5e-21 105.1 55 87.3
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 3.6e-19 99.8 46 100.0
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 3.0e-18 96.7 50 88.0


User provided reference genes

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