Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 8.9e-185 650.2 347 100.0
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 2.6e-184 648.7 347 99.7
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 1.8e-39 167.5 360 37.5
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 3.3e-38 163.3 356 37.9
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 2.0e-35 154.1 381 35.4
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 1.0e-34 151.8 367 34.9
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 6.5e-34 149.1 353 35.4
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 2.7e-32 143.7 413 32.9
BcaC09g48023 Brassica carinata HOM05D007244 ORTHO05D011635 1.3e-31 141.4 400 33.8
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 3.9e-31 139.8 393 32.8
BolC6t35250H Brassica oleracea HOM05D007244 ORTHO05D015497 4.3e-30 136.3 403 32.3
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 9.7e-30 135.2 383 34.2
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 2.8e-29 133.7 309 37.5
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-27 127.5 353 34.6
A04p29850 Brassica napus HOM05D007244 ORTHO05D028076 2.9e-26 123.6 391 34.5
BraA04t18445Z Brassica rapa HOM05D007244 ORTHO05D028076 2.9e-26 123.6 391 34.5
A05p03870 Brassica napus HOM05D007244 ORTHO05D027185 8.5e-26 122.1 296 33.8
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 5.5e-25 119.4 410 31.2
C04p39440 Brassica napus HOM05D007244 ORTHO05D011635 1.6e-24 117.9 152 48.7
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 2.1e-24 117.5 165 44.2
C04p39410 Brassica napus HOM05D007244 ORTHO05D011635 3.6e-24 116.7 152 48.7
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.3e-23 114.0 384 31.5
BolC7t40578H Brassica oleracea HOM05D007244 ORTHO05D028076 2.3e-23 114.0 289 36.3
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.3e-23 114.0 384 31.5
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 2.0e-22 110.9 219 37.9
A02p36210 Brassica napus HOM05D007244 ORTHO05D042440 2.5e-22 110.5 356 33.4
BraA06t24270Z Brassica rapa HOM05D007244 ORTHO05D011635 2.5e-22 110.5 95 67.4
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 9.7e-22 108.6 403 28.8
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 4.8e-21 106.3 214 39.3
BolC8t48551H Brassica oleracea HOM05D007244 ORTHO05D011635 1.4e-20 104.8 187 41.7
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 1.4e-20 104.8 415 28.0
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 5.3e-20 102.8 319 31.3
BolC7t45144H Brassica oleracea HOM05D007244 ORTHO05D042440 5.3e-20 102.8 293 35.2
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 9.1e-20 102.1 224 39.7
C02p37770 Brassica napus HOM05D007244 ORTHO05D015497 1.5e-19 101.3 334 30.2
BcaC01g04059 Brassica carinata HOM05D007244 ORTHO05D024067 2.0e-19 100.9 148 42.6
C03p14600 Brassica napus HOM05D000496 ORTHO05D000411 2.0e-19 100.9 256 34.4
C04p72950 Brassica napus HOM05D007244 ORTHO05D011635 1.0e-18 98.6 218 36.7
BolC1t04930H Brassica oleracea HOM05D007244 ORTHO05D024067 1.3e-18 98.2 119 50.4
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 1.7e-18 97.8 360 31.4
C04p05140 Brassica napus HOM05D007244 ORTHO05D011635 2.2e-18 97.4 209 39.7
BcaB07g32388 Brassica carinata HOM05D000777 ORTHO05D000595 8.5e-18 95.5 120 53.3
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 8.5e-18 95.5 178 41.6
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 2.5e-17 94.0 88 62.5
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 2.1e-16 90.9 105 54.3
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 2.1e-16 90.9 193 37.8
BolC3t14675H Brassica oleracea HOM05D007244 ORTHO05D011635 2.7e-16 90.5 284 31.7
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 5.1e-15 86.3 180 36.7
BraA08t33378Z Brassica rapa HOM05D007244 ORTHO05D011709 1.1e-14 85.1 327 28.7
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 1.5e-14 84.7 208 33.7
C08p19570 Brassica napus HOM05D007244 ORTHO05D027899 2.0e-14 84.3 238 34.0
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 2.6e-14 84.0 115 47.8
BolC3t21246H Brassica oleracea HOM05D007244 ORTHO05D024067 3.3e-14 83.6 126 45.2
BolC6t35262H Brassica oleracea HOM05D007244 ORTHO05D027097 4.4e-14 83.2 133 44.4
BcaC04g23357 Brassica carinata HOM05D002074 ORTHO05D002164 5.7e-14 82.8 85 51.8
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 7.4e-14 82.4 72 56.9
BcaB05g21481 Brassica carinata HOM05D000048 ORTHO05D000436 1.3e-13 81.6 121 47.1
BraA10t42654Z Brassica rapa HOM05D007244 ORTHO05D024067 1.7e-13 81.3 157 38.2
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 4.8e-13 79.7 307 30.0
BolC7t40576H Brassica oleracea HOM05D007244 ORTHO05D039184 6.3e-13 79.3 403 27.3
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 8.2e-13 79.0 263 30.0
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-12 78.6 346 30.3
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 1.4e-12 78.2 85 54.1
BcaC06g36660 Brassica carinata HOM05D007244 ORTHO05D039184 1.4e-12 78.2 213 33.3
BcaB03g16499 Brassica carinata HOM05D013597 ORTHO05D011635 4.1e-12 76.6 89 51.7
BcaC03g17567 Brassica carinata HOM05D009169 ORTHO05D011621 4.1e-12 76.6 93 54.8
C06p49860 Brassica napus HOM05D007244 ORTHO05D011635 4.1e-12 76.6 78 50.0
BraA06t27694Z Brassica rapa HOM05D007244 ORTHO05D027097 7.0e-12 75.9 338 29.6
BraA09t37805Z Brassica rapa HOM05D007244 ORTHO05D011635 7.0e-12 75.9 113 46.0
C06p19100 Brassica napus HOM05D007244 ORTHO05D011635 9.1e-12 75.5 263 31.9
BolC4t22886H Brassica oleracea HOM05D007244 ORTHO05D015497 9.1e-12 75.5 116 46.6
BolC6t35336H Brassica oleracea HOM05D007244 ORTHO05D011635 1.5e-11 74.7 115 45.2
BcaB07g33891 Brassica carinata HOM05D007244 ORTHO05D011635 2.0e-11 74.3 88 50.0
BcaC07g39785 Brassica carinata HOM05D007244 ORTHO05D011635 2.6e-11 73.9 55 63.6
BcaC01g02738 Brassica carinata HOM05D000042 ORTHO05D003657 4.5e-11 73.2 135 41.5
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 5.9e-11 72.8 83 54.2
BolC4t23641H Brassica oleracea HOM05D007244 ORTHO05D011635 5.9e-11 72.8 120 46.7
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 1.0e-10 72.0 196 35.2
BcaC03g14048 Brassica carinata HOM05D007244 ORTHO05D000411 1.3e-10 71.6 129 41.1
BcaC07g41124 Brassica carinata HOM05D000249 ORTHO05D000206 1.3e-10 71.6 241 28.2
BolC7t41136H Brassica oleracea HOM05D045479 ORTHO05D042432 1.3e-10 71.6 165 37.0
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 1.7e-10 71.2 83 53.0
BolC7t43259H Brassica oleracea HOM05D007244 ORTHO05D105349 1.7e-10 71.2 297 34.7
A05p43470 Brassica napus HOM05D007244 ORTHO05D033750 3.8e-10 70.1 214 35.5
BraA07t31383Z Brassica rapa HOM05D007244 ORTHO05D033750 3.8e-10 70.1 214 35.5
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-10 69.3 381 29.1
BcaC09g48969 Brassica carinata HOM05D007244 ORTHO05D011635 6.5e-10 69.3 81 53.1
BolC5t29837H Brassica oleracea HOM05D007244 ORTHO05D021589 6.5e-10 69.3 102 50.0
BcaC04g22876 Brassica carinata HOM05D007244 ORTHO05D011635 1.5e-09 68.2 87 44.8
C08p13350 Brassica napus HOM05D013597 ORTHO05D017540 1.5e-09 68.2 153 34.0
BolC5t33793H Brassica oleracea HOM05D007244 ORTHO05D032887 2.5e-09 67.4 152 40.1
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-09 66.6 307 27.0
A03p24790 Brassica napus HOM05D000496 ORTHO05D000411 4.2e-09 66.6 40 70.0
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 4.2e-09 66.6 361 28.0
BolC3t14156H Brassica oleracea HOM05D007244 ORTHO05D015497 9.4e-09 65.5 74 44.6
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-08 65.1 351 29.1
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 1.2e-08 65.1 142 39.4
BcaB04g20713 Brassica carinata HOM05D007244 ORTHO05D011635 1.6e-08 64.7 121 37.2
BcaC01g01541 Brassica carinata HOM05D000081 ORTHO05D014497 1.6e-08 64.7 151 35.8
A04p30590 Brassica napus HOM05D007244 ORTHO05D015497 1.6e-08 64.7 297 28.6
BcaC08g43238 Brassica carinata HOM05D007244 ORTHO05D094667 2.1e-08 64.3 194 32.0
BolC4t22147H Brassica oleracea HOM05D007244 ORTHO05D015497 2.7e-08 63.9 40 65.0
C04p07250 Brassica napus HOM05D007244 ORTHO05D021882 3.6e-08 63.5 176 34.1
C06p04460 Brassica napus HOM05D007244 ORTHO05D015497 3.6e-08 63.5 152 36.8
BolC6t35576H Brassica oleracea HOM05D007244 ORTHO05D015497 3.6e-08 63.5 152 36.8
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 6.1e-08 62.8 134 40.3
BcaC03g17553 Brassica carinata HOM05D000055 ORTHO05D093663 1.4e-07 61.6 188 30.3
C03p03260 Brassica napus HOM05D007244 ORTHO05D015497 1.4e-07 61.6 46 54.3
BolC5t31092H Brassica oleracea HOM05D007244 ORTHO05D024493 1.4e-07 61.6 36 72.2
BcaC05g29073 Brassica carinata HOM05D007244 ORTHO05D011635 2.3e-07 60.8 90 41.1
BolC5t31512H Brassica oleracea HOM05D007244 ORTHO05D015497 2.3e-07 60.8 70 45.7
BcaB07g33782 Brassica carinata HOM05D007244 ORTHO05D021882 3.0e-07 60.5 101 46.5
BcaB07g34150 Brassica carinata HOM05D007244 ORTHO05D091796 3.0e-07 60.5 58 56.9
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 3.0e-07 60.5 134 38.8
BolC5t33308H Brassica oleracea HOM05D007244 ORTHO05D011635 3.0e-07 60.5 75 50.7
BcaB07g33461 Brassica carinata HOM05D007244 ORTHO05D032887 4.0e-07 60.1 98 45.9
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 5.2e-07 59.7 119 40.3
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 8.8e-07 58.9 56 51.8
BcaC09g48319 Brassica carinata HOM05D007244 ORTHO05D027185 1.1e-06 58.5 170 34.7
BolC6t35913H Brassica oleracea HOM05D007244 ORTHO05D021882 1.5e-06 58.2 81 50.6
BcaB06g28278 Brassica carinata HOM05D007244 ORTHO05D039573 2.0e-06 57.8 109 36.7
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 2.0e-06 57.8 151 32.5
BolC2t12338H Brassica oleracea HOM05D007244 ORTHO05D011635 2.6e-06 57.4 71 46.5
BolC9t55947H Brassica oleracea HOM05D002126 ORTHO05D002195 3.3e-06 57.0 222 28.4
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 4.4e-06 56.6 115 38.3
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 5.7e-06 56.2 132 39.4
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-06 56.2 316 23.1
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 7.5e-06 55.8 60 46.7


User provided reference genes

Program Settings