Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 5.9e-42 173.7 83 100.0
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 2.9e-41 171.4 83 98.8
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 8.5e-41 169.9 83 97.6
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 2.5e-40 168.3 83 97.6
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 3.2e-40 167.9 81 98.8
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.2e-40 167.5 83 97.6
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.2e-40 167.5 83 97.6
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.2e-40 167.5 83 97.6
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.2e-40 167.5 83 97.6
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 5.5e-40 167.2 81 97.5
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 7.2e-40 166.8 83 96.4
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 9.4e-40 166.4 80 98.8
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 9.4e-40 166.4 80 98.8
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 1.8e-38 162.2 78 97.4
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.8e-38 162.2 78 97.4
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.0e-38 161.4 77 98.7
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 3.9e-38 161.0 83 94.0
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.9e-38 161.0 78 97.4
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.9e-38 161.0 78 97.4
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.9e-38 161.0 78 97.4
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 5.1e-38 160.6 84 95.2
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 5.1e-38 160.6 83 95.2
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 6.7e-38 160.2 83 90.4
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 8.8e-38 159.8 76 98.7
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 8.8e-38 159.8 76 98.7
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 1.1e-37 159.5 76 97.4
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 1.1e-37 159.5 79 94.9
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 1.1e-37 159.5 79 94.9
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 1.5e-37 159.1 78 96.2
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 2.5e-37 158.3 76 97.4
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 2.5e-37 158.3 76 97.4
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 2.5e-37 158.3 76 97.4
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 2.5e-37 158.3 79 94.9
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 3.3e-37 157.9 76 97.4
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 3.3e-37 157.9 77 96.1
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 4.3e-37 157.5 76 97.4
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.7e-37 157.1 77 96.1
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 9.7e-37 156.4 74 98.6
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 9.7e-37 156.4 74 98.6
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 9.7e-37 156.4 74 98.6
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 1.3e-36 156.0 76 96.1
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 3.7e-36 154.5 77 96.1
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 6.3e-36 153.7 76 96.1
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 8.2e-36 153.3 76 94.7
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 1.1e-35 152.9 76 97.4
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 6.9e-35 150.2 83 90.4
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 6.9e-35 150.2 83 90.4
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.5e-34 147.5 71 98.6
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.5e-34 147.5 71 98.6
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 2.7e-31 138.3 83 83.1
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 3.6e-31 137.9 85 81.2
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 1.1e-29 132.9 76 85.5
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 1.1e-29 132.9 67 94.0
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 2.0e-29 132.1 64 96.9
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 4.4e-29 131.0 67 92.5
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 9.7e-29 129.8 76 82.9
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 9.7e-29 129.8 76 82.9
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 9.7e-29 129.8 76 82.9
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 9.7e-29 129.8 76 82.9
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 2.2e-28 128.6 62 98.4
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 2.2e-28 128.6 62 98.4
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 4.8e-28 127.5 64 93.8
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 6.3e-28 127.1 63 95.2
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 8.2e-28 126.7 76 80.3
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 90.5
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 5.0e-25 117.5 69 82.6
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 8.5e-25 116.7 61 90.2
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 1.1e-24 116.3 83 72.3
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 1.9e-24 115.5 59 93.2
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 1.9e-24 115.5 59 93.2
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.1e-23 112.1 58 91.4
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 3.6e-23 111.3 53 96.2
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 6.1e-23 110.5 56 92.9
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 8.0e-23 110.2 58 89.7
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 1.0e-22 109.8 74 75.7
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 2.3e-22 108.6 52 98.1
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 4.0e-22 107.8 52 96.2
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 9.7e-21 103.2 50 98.0
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 6.3e-20 100.5 54 92.6
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 2.4e-19 98.6 68 73.5
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 5.3e-19 97.4 59 74.6
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 9.1e-19 96.7 46 97.8
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 2.0e-18 95.5 74 66.2
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 2.7e-18 95.1 55 85.5
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 2.7e-18 95.1 73 63.0
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 7.7e-18 93.6 47 91.5
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 2.2e-17 92.0 54 83.3
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 6.5e-17 90.5 76 63.2
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 6.5e-17 90.5 76 61.8
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.5e-16 89.4 62 72.6
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 3.6e-15 84.7 40 97.5
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 4.7e-15 84.3 41 97.6
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 5.2e-14 80.9 42 88.1
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 8.8e-14 80.1 50 78.0
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 1.8e-11 72.4 36 94.4
FAN07G1458 Fragaria x ananassa HOM05D000388 ORTHO05D004227 2.4e-11 72.0 37 86.5
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 4.1e-11 71.2 53 66.0
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 2.5e-08 62.0 43 67.4
Eucgr.J00123 Eucalyptus grandis HOM05D000388 ORTHO05D004227 6.8e-06 53.9 27 88.9
HanXRQChr00c0268g0572931 Helianthus annuus HOM05D000388 ORTHO05D004227 8.8e-06 53.5 57 57.9


User provided reference genes

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