Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.1e-87 326.6 167 100.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 6.0e-86 320.9 167 97.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 6.0e-86 320.9 167 97.0
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 2.3e-85 318.9 167 97.0
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 4.3e-84 314.7 167 95.8
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 5.8e-81 304.3 167 92.8
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 3.2e-79 298.5 167 89.8
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 3.1e-74 282.0 167 85.6
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 3.1e-66 255.4 167 80.8
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 3.1e-66 255.4 167 80.8
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 6.9e-66 254.2 167 78.4
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.0e-65 252.7 167 77.8
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 3.8e-64 248.4 167 77.2
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 3.4e-57 225.3 167 68.9
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.1e-42 177.2 173 58.4
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 6.9e-42 174.5 112 76.8
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 9.0e-42 174.1 176 57.4
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.0e-40 170.6 110 75.5
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 2.5e-39 166.0 118 71.2
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 4.2e-39 165.2 131 64.9
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 7.2e-39 164.5 154 55.8
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 7.2e-39 164.5 130 64.6
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 1.4e-37 160.2 109 74.3
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.8e-37 159.8 112 71.4
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 5.1e-37 158.3 128 65.6
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.1e-36 157.1 161 52.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.1e-36 157.1 120 66.7
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.1e-36 157.1 173 53.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.9e-36 156.4 129 60.5
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 3.3e-36 155.6 93 79.6
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 5.7e-36 154.8 114 67.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 5.7e-36 154.8 96 78.1
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 5.7e-36 154.8 96 78.1
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 7.4e-36 154.5 112 72.3
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 7.4e-36 154.5 129 63.6
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 7.4e-36 154.5 97 77.3
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 9.7e-36 154.1 93 78.5
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.3e-35 153.7 94 77.7
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.7e-35 153.3 94 76.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.2e-35 152.9 112 70.5
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.2e-35 152.9 112 70.5
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 2.8e-35 152.5 92 80.4
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 3.7e-35 152.1 118 64.4
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 3.7e-35 152.1 92 80.4
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 139 57.6
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 96 76.0
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 4.8e-35 151.8 96 76.0
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 96 76.0
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 6.3e-35 151.4 117 64.1
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 8.2e-35 151.0 96 75.0
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.1e-34 150.6 93 77.4
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.1e-34 150.6 93 77.4
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.1e-34 150.6 104 70.2
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.4e-34 150.2 115 68.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.4e-34 150.2 93 78.5
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.4e-34 150.2 113 67.3
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.4e-34 150.2 94 75.5
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.8e-34 149.8 96 74.0
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.8e-34 149.8 96 74.0
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.8e-34 149.8 160 54.4
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.4e-34 149.4 135 61.5
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 2.4e-34 149.4 93 76.3
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.4e-34 149.4 93 76.3
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.4e-34 149.4 93 76.3
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 2.4e-34 149.4 93 74.2
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 2.4e-34 149.4 93 74.2
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.1e-34 149.1 159 52.8
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 4.1e-34 148.7 130 57.7
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 5.3e-34 148.3 105 70.5
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 2.0e-33 146.4 136 55.9
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 2.0e-33 146.4 112 67.9
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.0e-33 146.4 140 57.1
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 4.5e-33 145.2 142 55.6
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 5.9e-33 144.8 161 49.1
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.7e-32 143.3 108 67.6
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.1e-31 140.6 170 46.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.1e-31 140.6 170 46.5
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.4e-31 140.2 96 69.8
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.4e-31 140.2 114 62.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.9e-31 139.8 100 66.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 3.2e-31 139.0 105 70.5
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 4.2e-31 138.7 93 71.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 1.6e-30 136.7 137 51.8
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.1e-30 136.3 100 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 2.3e-29 132.9 93 68.8
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 3.0e-29 132.5 128 56.2
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 7.4e-28 127.9 71 83.1
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 2.8e-27 125.9 79 78.5
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 4.5e-25 118.6 72 76.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 2.2e-24 116.3 106 54.7
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 5.0e-24 115.2 96 63.5
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.4e-23 113.6 89 60.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-22 110.5 62 80.6
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 1.2e-22 110.5 76 71.1
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 4.7e-22 108.6 64 76.6
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 8.0e-22 107.8 63 79.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 2.0e-20 103.2 134 44.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.3e-19 98.2 62 71.0
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.4e-18 97.1 80 58.8
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 4.8e-11 72.0 51 68.6
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 2.4e-10 69.7 51 66.7
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 3.1e-10 69.3 44 77.3


User provided reference genes

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