Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 1.3e-263 912.5 462 100.0
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 9.9e-240 833.2 456 93.9
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 4.9e-239 830.9 456 94.1
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 5.3e-233 810.8 420 98.6
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 2.7e-229 798.5 457 90.8
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.8e-228 795.8 456 91.2
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 2.3e-228 795.4 456 91.0
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 5.1e-228 794.3 457 91.0
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 2.5e-227 792.0 456 91.2
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 2.8e-226 788.5 457 90.4
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 2.8e-226 788.5 457 90.4
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 1.2e-224 783.1 456 89.3
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 1.7e-223 779.2 456 88.6
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 8.2e-218 760.4 456 87.3
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 4.5e-216 754.6 456 86.2
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 4.5e-208 728.0 456 83.8
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 1.9e-206 722.6 421 89.5
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 4.7e-197 691.4 463 80.6
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.3e-180 636.0 460 75.2
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 6.1e-165 584.7 466 70.6
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 1.2e-157 560.5 315 91.4
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 2.0e-152 543.1 461 64.4
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 8.6e-151 537.7 460 64.1
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 5.2e-148 528.5 459 63.4
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.6e-144 516.9 459 61.4
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.6e-144 516.9 459 61.4
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 2.7e-144 516.2 460 63.0
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.7e-144 516.2 463 63.7
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 3.5e-144 515.8 461 61.0
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.0e-144 515.0 459 61.2
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.3e-143 513.8 461 61.6
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.5e-142 510.4 459 59.0
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.5e-142 509.6 459 58.6
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 7.3e-142 508.1 461 61.4
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 1.2e-141 507.3 459 60.8
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.6e-141 505.8 465 62.4
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 4.7e-141 505.4 462 62.8
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.8e-140 503.4 460 62.4
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 5.2e-140 501.9 469 57.8
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 5.2e-140 501.9 466 59.4
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 1.5e-139 500.4 468 62.0
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.6e-139 499.6 462 59.1
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 5.8e-139 498.4 460 60.4
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.9e-137 493.4 462 59.7
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 4.1e-137 492.3 458 60.7
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.2e-136 490.7 460 59.3
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 1.9e-134 483.4 458 58.7
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 3.3e-134 482.6 465 59.6
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 3.3e-134 482.6 460 60.2
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 7.3e-134 481.5 462 57.6
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.2e-133 480.7 465 59.1
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.2e-133 480.7 463 59.8
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.8e-133 479.6 462 58.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 3.6e-133 479.2 451 59.6
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 1.1e-132 477.6 465 57.2
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.4e-132 477.2 462 57.6
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.4e-132 477.2 458 58.7
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 2.4e-132 476.5 451 58.3
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 2.4e-132 476.5 465 57.2
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 2.4e-132 476.5 465 60.0
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 3.1e-132 476.1 458 58.3
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 3.4e-131 472.6 459 58.2
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 4.4e-131 472.2 463 59.6
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 4.9e-130 468.8 465 57.0
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 6.4e-130 468.4 465 57.4
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.9e-129 466.8 452 59.7
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 1.9e-129 466.8 460 58.0
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 1.9e-129 466.8 442 59.5
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 3.2e-129 466.1 454 57.5
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 9.3e-129 464.5 463 56.4
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 1.6e-128 463.8 465 56.1
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 2.1e-128 463.4 461 59.2
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 2.7e-128 463.0 465 58.7
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 7.8e-128 461.5 465 58.5
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.0e-127 461.1 465 58.1
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.0e-127 461.1 464 58.4
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 5.1e-127 458.8 460 56.1
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 6.6e-127 458.4 451 58.1
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 1.1e-126 457.6 459 57.5
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.1e-126 457.6 468 57.1
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 4.3e-126 455.7 458 57.0
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 9.6e-126 454.5 461 57.3
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.6e-125 453.8 461 57.3
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 2.1e-125 453.4 475 57.7
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.6e-125 452.6 464 57.1
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 5.3e-124 448.7 463 56.6
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.2e-123 447.6 460 56.3
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 3.4e-123 446.0 469 57.6
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 7.6e-123 444.9 464 56.5
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 2.2e-122 443.4 456 54.8
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 8.4e-122 441.4 446 58.3
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.1e-121 441.0 457 57.1
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 1.1e-121 441.0 467 54.4
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 2.4e-121 439.9 455 54.9
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 7.1e-121 438.3 459 55.8
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 9.3e-121 438.0 466 54.3
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 9.3e-121 438.0 462 54.3
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 9.3e-121 438.0 462 54.3
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.2e-120 437.6 459 54.0
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 1.3e-119 434.1 507 53.3
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 1.5e-118 430.6 460 52.8
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 3.3e-118 429.5 461 53.8
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 4.3e-118 429.1 465 56.8
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 9.6e-118 427.9 484 53.7
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 6.2e-117 425.2 503 52.9
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 1.4e-116 424.1 466 54.7
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 1.8e-116 423.7 462 52.8
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 2.4e-116 423.3 468 53.0
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 3.1e-116 422.9 463 52.3
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 2.0e-115 420.2 478 51.7
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.0e-115 420.2 478 53.3
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 7.6e-115 418.3 459 52.7
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 9.9e-115 417.9 486 51.9
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 4.9e-114 415.6 451 57.2
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 8.4e-114 414.8 494 50.8
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 6.7e-111 405.2 461 52.9
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 4.0e-108 396.0 464 52.8
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 5.3e-108 395.6 370 60.5
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 3.8e-106 389.4 442 52.7
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.4e-105 387.5 466 51.3
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 5.5e-105 385.6 450 50.4
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 3.5e-104 382.9 445 51.5
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.3e-103 380.9 449 51.2
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 1.8e-103 380.6 481 49.3
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 1.8e-103 380.6 465 50.5
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.4e-102 375.2 394 54.6
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 1.6e-101 374.0 432 51.2
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 3.7e-101 372.9 464 50.0
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.0e-99 367.1 351 58.7
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 2.6e-99 366.7 460 48.7
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 5.9e-99 365.5 377 54.6
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.9e-95 352.8 401 52.6
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.8e-90 336.3 470 45.3
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 9.4e-89 331.6 465 46.5
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 1.2e-88 331.3 260 70.4
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.6e-88 330.9 448 46.4
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 3.6e-88 329.7 441 46.9
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 5.1e-87 325.9 347 55.6
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.4e-84 317.0 470 44.5
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.3e-84 315.8 291 61.2
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.6e-83 313.5 376 50.5
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 3.8e-82 309.7 458 45.9
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 3.2e-81 306.6 452 46.0
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.4e-79 301.2 468 40.4
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 1.7e-77 294.3 295 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 9.1e-68 261.9 445 39.3
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 1.6e-67 261.2 480 37.5
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 2.3e-63 247.3 263 54.8
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 8.8e-63 245.4 381 42.0
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 1.5e-57 228.0 478 35.4
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 9.8e-54 215.3 464 36.0
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 3.6e-48 196.8 415 33.5
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 2.2e-45 187.6 223 53.4
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 1.1e-44 185.3 377 34.5
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 1.6e-40 171.4 249 42.6
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-38 164.9 253 40.7
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 8.3e-29 132.5 167 48.5
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.1e-28 132.1 495 29.5
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.2e-19 102.1 61 82.0
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 1.6e-19 101.7 181 40.3
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 3.5e-19 100.5 86 61.6
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 1.8e-15 88.2 68 66.2
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 1.8e-15 88.2 90 55.6
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 1.2e-14 85.5 71 59.2
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 1.0e-10 72.4 84 40.5
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 1.3e-10 72.0 78 44.9
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 3.9e-10 70.5 40 82.5
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.3e-09 67.0 89 42.7
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 5.6e-09 66.6 83 51.8
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 1.2e-06 58.9 46 60.9
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.6e-06 57.8 136 33.1
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 4.5e-06 57.0 81 37.0


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