Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p61070 Brassica napus HOM05D012749 ORTHO05D024259 2.8e-188 661.8 327 100.0
BcaC02g07986 Brassica carinata HOM05D012749 ORTHO05D024259 3.1e-187 658.3 327 99.4
BolC4t27591H Brassica oleracea HOM05D012749 ORTHO05D024259 9.0e-187 656.8 327 99.1
A04p24250 Brassica napus HOM05D012749 ORTHO05D024259 1.4e-150 536.6 337 82.2
BraA04t17944Z Brassica rapa HOM05D012749 ORTHO05D024259 1.5e-149 533.1 337 82.2
BcaC02g07991 Brassica carinata HOM05D012749 ORTHO05D039536 2.0e-85 320.1 224 72.8
C04p60990 Brassica napus HOM05D012749 ORTHO05D039536 3.4e-85 319.3 224 72.3
C04p61030 Brassica napus HOM05D012749 ORTHO05D040184 6.7e-73 278.5 142 98.6
BolC4t27594H Brassica oleracea HOM05D012749 ORTHO05D040184 2.1e-71 273.5 139 98.6
BcaB06g28543 Brassica carinata HOM05D012749 ORTHO05D000594 3.9e-65 252.7 186 71.5
Carub.0004s1432 Capsella rubella HOM05D000896 ORTHO05D000594 2.6e-16 90.5 205 31.2
AT2G31420 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 4.9e-15 86.3 146 34.2
Aa31LG5G5500 Aethionema arabicum HOM05D000896 ORTHO05D000594 6.3e-15 85.9 172 32.0
BcaB01g01586 Brassica carinata HOM05D000896 ORTHO05D000594 1.1e-14 85.1 146 37.0
A04p23930 Brassica napus HOM05D016978 ORTHO05D018741 1.1e-14 85.1 133 37.6
A04p23950 Brassica napus HOM05D016978 ORTHO05D018741 1.1e-14 85.1 133 37.6
BraA04t17917Z Brassica rapa HOM05D016978 ORTHO05D018741 1.1e-14 85.1 133 37.6
BraA04t17919Z Brassica rapa HOM05D016978 ORTHO05D018741 1.1e-14 85.1 133 37.6
AL4G28060 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 3.1e-14 83.6 138 35.5
BolC4t27593H Brassica oleracea HOM05D000896 ORTHO05D000594 4.1e-14 83.2 141 34.0
Carub.0004s1399 Capsella rubella HOM05D000896 ORTHO05D000594 1.6e-13 81.3 166 32.5
BcaB06g28546 Brassica carinata HOM05D000896 ORTHO05D000594 5.9e-13 79.3 144 34.0
C04p60560 Brassica napus HOM05D016978 ORTHO05D018741 5.9e-13 79.3 133 36.1
C04p60630 Brassica napus HOM05D016978 ORTHO05D018741 5.9e-13 79.3 133 36.1
AL4G26670 Arabidopsis lyrata HOM05D012749 ORTHO05D000594 1.3e-12 78.2 133 31.6
Carub.0004s1350 Capsella rubella HOM05D000896 ORTHO05D000594 1.3e-12 78.2 143 35.0
AT2G27410 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.7e-12 77.8 163 35.0
Carub.0004s1274 Capsella rubella HOM05D000896 ORTHO05D000594 2.3e-12 77.4 163 29.4
CARHR125400 Cardamine hirsuta HOM05D000896 ORTHO05D000594 2.3e-12 77.4 127 35.4
Thhalv10012233m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.3e-12 77.4 146 32.2
C04p60580 Brassica napus HOM05D016978 ORTHO05D018741 5.0e-12 76.3 131 35.9
Carub.0004s1302 Capsella rubella HOM05D000896 ORTHO05D000594 1.1e-11 75.1 150 32.0
AL1G15880 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.5e-11 74.7 189 28.6
A04p24270 Brassica napus HOM05D000896 ORTHO05D000594 1.5e-11 74.7 150 30.0
BraA04t17946Z Brassica rapa HOM05D000896 ORTHO05D000594 1.5e-11 74.7 150 30.0
A04p23440 Brassica napus HOM05D000896 ORTHO05D000594 1.9e-11 74.3 176 34.1
BcaC02g07983 Brassica carinata HOM05D000896 ORTHO05D000594 2.5e-11 73.9 151 31.8
BcaC02g07988 Brassica carinata HOM05D000896 ORTHO05D000594 2.5e-11 73.9 151 31.8
C04p61050 Brassica napus HOM05D000896 ORTHO05D000594 2.5e-11 73.9 151 31.8
BolC4t27592H Brassica oleracea HOM05D000896 ORTHO05D000594 2.5e-11 73.9 151 31.8
A09p17570 Brassica napus HOM05D000896 ORTHO05D000594 5.6e-11 72.8 142 31.0
BraA09t37387Z Brassica rapa HOM05D000896 ORTHO05D000594 5.6e-11 72.8 142 31.0
AL4G27540 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 9.5e-11 72.0 128 33.6
AT2G31460 Arabidopsis thaliana HOM05D012749 ORTHO05D000594 9.5e-11 72.0 123 34.1
BraA04t17871Z Brassica rapa HOM05D000896 ORTHO05D000594 9.5e-11 72.0 146 34.2
CARHR125380 Cardamine hirsuta HOM05D000896 ORTHO05D000594 1.6e-10 71.2 167 30.5
AL1G15520 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.1e-10 70.9 159 31.4
Aa31LG1G8310 Aethionema arabicum HOM05D000896 ORTHO05D000594 3.6e-10 70.1 138 31.9
BcaC04g22224 Brassica carinata HOM05D000896 ORTHO05D000594 3.6e-10 70.1 142 31.0
C04p59750 Brassica napus HOM05D000896 ORTHO05D000594 4.7e-10 69.7 176 33.0
Thhalv10009984m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 4.7e-10 69.7 172 30.2
A04p24120 Brassica napus HOM05D000896 ORTHO05D000594 6.1e-10 69.3 216 28.2
C09p21870 Brassica napus HOM05D000896 ORTHO05D000594 6.1e-10 69.3 142 31.0
BolC9t55092H Brassica oleracea HOM05D000896 ORTHO05D000594 6.1e-10 69.3 142 31.0
Aa31LG1G8320 Aethionema arabicum HOM05D000896 ORTHO05D000594 8.0e-10 68.9 145 30.3
Aa31LG1G8390 Aethionema arabicum HOM05D000896 ORTHO05D000594 8.0e-10 68.9 145 30.3
C04p61210 Brassica napus HOM05D000896 ORTHO05D000594 1.0e-09 68.6 139 32.4
BolC4t27609H Brassica oleracea HOM05D000896 ORTHO05D000594 1.0e-09 68.6 139 32.4
BcaB07g31212 Brassica carinata HOM05D000896 ORTHO05D000594 1.4e-09 68.2 170 29.4
C04p61100 Brassica napus HOM05D000896 ORTHO05D000594 1.4e-09 68.2 136 32.4
BraA04t17932Z Brassica rapa HOM05D000896 ORTHO05D000594 1.4e-09 68.2 217 28.6
BraA04t17955Z Brassica rapa HOM05D000896 ORTHO05D000594 1.8e-09 67.8 163 28.8
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 4.0e-09 66.6 150 31.3
A05p13690 Brassica napus HOM05D000896 ORTHO05D000594 4.0e-09 66.6 134 30.6
BolC4t27481H Brassica oleracea HOM05D000896 ORTHO05D000594 4.0e-09 66.6 196 31.1
BraA05t20306Z Brassica rapa HOM05D000896 ORTHO05D000594 4.0e-09 66.6 134 30.6
AL4G27140 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 5.2e-09 66.2 158 31.0
Aa31LG1G8400 Aethionema arabicum HOM05D000896 ORTHO05D000594 8.9e-09 65.5 138 31.9
BcaB06g28529 Brassica carinata HOM05D000896 ORTHO05D000594 8.9e-09 65.5 189 31.2
C04p60850 Brassica napus HOM05D000896 ORTHO05D000594 1.2e-08 65.1 156 31.4
BcaC07g42126 Brassica carinata HOM05D000896 ORTHO05D000594 1.5e-08 64.7 169 32.0
C08p51670 Brassica napus HOM05D000896 ORTHO05D000594 1.5e-08 64.7 169 32.0
BolC8t52695H Brassica oleracea HOM05D000896 ORTHO05D000594 1.5e-08 64.7 169 32.0
BolC4t27576H Brassica oleracea HOM05D000896 ORTHO05D000594 2.0e-08 64.3 156 31.4
TPR.G9525 Trifolium pratense HOM05D000896 ORTHO05D000594 3.4e-08 63.5 133 32.3
BraA04t17973Z Brassica rapa HOM05D000896 ORTHO05D000594 4.4e-08 63.2 220 27.7
AL4G26970 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 5.7e-08 62.8 158 30.4
BcaC02g07964 Brassica carinata HOM05D000896 ORTHO05D000594 5.7e-08 62.8 225 25.8
BcaB06g28558 Brassica carinata HOM05D000896 ORTHO05D000594 7.5e-08 62.4 201 27.4
Medtr5g007890 Medicago truncatula HOM05D000896 ORTHO05D000594 7.5e-08 62.4 128 33.6
Medtr5g007950 Medicago truncatula HOM05D000896 ORTHO05D000594 7.5e-08 62.4 128 33.6
BcaB04g18266 Brassica carinata HOM05D000896 ORTHO05D000594 9.8e-08 62.0 155 32.3
BcaB06g28569 Brassica carinata HOM05D000896 ORTHO05D000594 9.8e-08 62.0 150 28.7
C04p61400 Brassica napus HOM05D000896 ORTHO05D000594 9.8e-08 62.0 225 25.3
Sc22g0001910 Simmondsia chinensis HOM05D000896 ORTHO05D000594 9.8e-08 62.0 150 27.3
BcaB06g28445 Brassica carinata HOM05D000896 ORTHO05D000594 1.3e-07 61.6 197 26.4
BcaC04g21106 Brassica carinata HOM05D000896 ORTHO05D000594 1.3e-07 61.6 157 29.9
A04p24520 Brassica napus HOM05D000896 ORTHO05D000594 1.3e-07 61.6 218 27.1
BolC9t56400H Brassica oleracea HOM05D000896 ORTHO05D000594 1.3e-07 61.6 157 29.9
A04p24380 Brassica napus HOM05D000896 ORTHO05D000594 1.7e-07 61.2 216 26.4
BolC1t01330H Brassica oleracea HOM05D000896 ORTHO05D000594 1.7e-07 61.2 131 29.0
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.9e-07 60.5 140 30.7
AT2G24670 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 2.9e-07 60.5 172 30.2
Carub.0001s0495 Capsella rubella HOM05D000896 ORTHO05D000594 2.9e-07 60.5 184 28.8
ClCG08G015080 Citrullus lanatus HOM05D000896 ORTHO05D000594 3.7e-07 60.1 138 31.9
PGSC0003DMG400006296 Solanum tuberosum HOM05D000011 ORTHO05D007164 3.7e-07 60.1 117 33.3
AT2G32645 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 4.9e-07 59.7 161 30.4
Carub.0007s1353 Capsella rubella HOM05D000896 ORTHO05D000594 4.9e-07 59.7 176 27.8
A09p28140 Brassica napus HOM05D000896 ORTHO05D000594 6.4e-07 59.3 70 35.7
A09p67360 Brassica napus HOM05D000896 ORTHO05D000594 6.4e-07 59.3 169 31.4
BraA09t42067Z Brassica rapa HOM05D000896 ORTHO05D000594 6.4e-07 59.3 169 31.4
Aa31LG1G8430 Aethionema arabicum HOM05D000896 ORTHO05D000594 8.3e-07 58.9 178 25.3
C05p03980 Brassica napus HOM05D000896 ORTHO05D000594 1.4e-06 58.2 136 33.1
BolC5t29176H Brassica oleracea HOM05D000896 ORTHO05D000594 1.4e-06 58.2 136 33.1
ClCG01G006230 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.4e-06 58.2 126 29.4
ClCG01G006250 Citrullus lanatus HOM05D000896 ORTHO05D000594 1.4e-06 58.2 173 26.6
Medtr3g452640 Medicago truncatula HOM05D000896 ORTHO05D000594 1.4e-06 58.2 169 28.4
AL3G40220 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.8e-06 57.8 170 28.2
AL4G15340 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.8e-06 57.8 150 30.7
C04p61060 Brassica napus HOM05D000896 ORTHO05D000594 3.2e-06 57.0 125 31.2
BcaC02g07987 Brassica carinata HOM05D000896 ORTHO05D000594 4.1e-06 56.6 141 28.4
BcaC05g24358 Brassica carinata HOM05D000896 ORTHO05D000594 4.1e-06 56.6 136 33.1
AL7G52070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 5.4e-06 56.2 176 26.1
BcaB06g28447 Brassica carinata HOM05D000896 ORTHO05D000594 5.4e-06 56.2 184 26.6
C04p61020 Brassica napus HOM05D000896 ORTHO05D000594 5.4e-06 56.2 135 28.9
BraA10t42685Z Brassica rapa HOM05D000896 ORTHO05D000594 5.4e-06 56.2 129 32.6
MELO3C005256.2 Cucumis melo HOM05D000896 ORTHO05D000594 5.4e-06 56.2 178 27.0
Sed0008121 Sechium edule HOM05D000896 ORTHO05D000594 7.0e-06 55.8 157 28.0
Duzib177G0732 Durio zibethinus HOM05D000896 ORTHO05D000594 9.2e-06 55.5 159 28.9
Lalb_Chr09g0329091 Lupinus albus HOM05D000896 ORTHO05D000594 9.2e-06 55.5 132 31.8


User provided reference genes

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