Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p60930 Brassica napus HOM05D005331 ORTHO05D097229 1.2e-49 199.5 98 100.0
Sp4g13980 Schrenkiella parvula HOM05D005331 ORTHO05D007596 1.0e-16 90.1 104 56.7
AL4G26780 Arabidopsis lyrata HOM05D005331 ORTHO05D007596 1.3e-16 89.7 102 53.9
Thhalv10016447m.g Eutrema salsugineum HOM05D005331 ORTHO05D007596 1.7e-16 89.4 102 54.9
AT2G31530 Arabidopsis thaliana HOM05D005331 ORTHO05D007596 6.5e-16 87.4 102 52.9
CARHR125170 Cardamine hirsuta HOM05D005331 ORTHO05D007596 5.5e-15 84.3 102 53.9
Aa31LG5G5400 Aethionema arabicum HOM05D005331 ORTHO05D007596 4.7e-14 81.3 103 49.5
BraA03t11033Z Brassica rapa HOM05D005331 ORTHO05D007596 8.0e-14 80.5 99 51.5
A03p17680 Brassica napus HOM05D005331 ORTHO05D007596 1.4e-13 79.7 98 51.0
BolC3t14446H Brassica oleracea HOM05D005331 ORTHO05D007596 3.0e-13 78.6 98 50.0
BcaC01g05946 Brassica carinata HOM05D005331 ORTHO05D007596 4.0e-13 78.2 98 50.0
C03p20770 Brassica napus HOM05D005331 ORTHO05D007596 4.0e-13 78.2 98 50.0
Carub.0004s1284 Capsella rubella HOM05D005331 ORTHO05D007596 6.8e-13 77.4 102 49.0
BcaB01g04039 Brassica carinata HOM05D005331 ORTHO05D007596 1.5e-12 76.3 107 49.5
THA.LOC104817518 Tarenaya hassleriana HOM05D005331 ORTHO05D007596 9.8e-12 73.6 105 45.7
TAR633G1479 Trochodendron aralioides HOM05D005331 ORTHO05D007596 5.4e-10 67.8 98 41.8
Prupe.8G241800 Prunus persica HOM05D005331 ORTHO05D007596 1.2e-09 66.6 101 41.6
Gorai.008G004800 Gossypium raimondii HOM05D005331 ORTHO05D007596 1.6e-09 66.2 103 40.8
COL.COLO4_09103 Corchorus olitorius HOM05D005331 ORTHO05D007596 2.0e-09 65.9 100 44.0
Haze_04717 Corylus avellana HOM05D005331 ORTHO05D007596 2.0e-09 65.9 77 48.1
Gohir.D12G004900 Gossypium hirsutum HOM05D005331 ORTHO05D007596 2.0e-09 65.9 103 40.8
Nn1g02210 Nelumbo nucifera HOM05D005331 ORTHO05D007596 2.0e-09 65.9 101 41.6
Duzib138G0982 Durio zibethinus HOM05D005331 ORTHO05D007596 2.7e-09 65.5 103 40.8
GSVIVG01011128001 Vitis vinifera HOM05D005331 ORTHO05D007596 2.7e-09 65.5 82 48.8
Sed0009831 Sechium edule HOM05D005331 ORTHO05D007596 3.5e-09 65.1 97 46.4
Gohir.A12G005400 Gossypium hirsutum HOM05D005331 ORTHO05D007596 4.5e-09 64.7 103 40.8
MD03G1266100 Malus domestica HOM05D005331 ORTHO05D007596 4.5e-09 64.7 109 38.5
Thecc.01G280200 Theobroma cacao HOM05D005331 ORTHO05D007596 4.5e-09 64.7 103 40.8
ClCG07G000230 Citrullus lanatus HOM05D005331 ORTHO05D007596 5.9e-09 64.3 75 49.3
PSO170G4087 Papaver somniferum HOM05D005331 ORTHO05D007596 5.9e-09 64.3 99 40.4
CsaV3_6G037090 Cucumis sativus L. HOM05D005331 ORTHO05D007596 7.7e-09 63.9 75 48.0
Migut.N02164 Erythranthe guttata HOM05D005331 ORTHO05D007596 7.7e-09 63.9 82 41.5
Aqoxy2G03313 Aquilegia oxysepala HOM05D005331 ORTHO05D007596 1.0e-08 63.5 91 45.1
CSS0010605 Camellia sinensis var. sinensis HOM05D005331 ORTHO05D007596 1.0e-08 63.5 77 45.5
CSS0033819 Camellia sinensis var. sinensis HOM05D005331 ORTHO05D007596 1.0e-08 63.5 77 45.5
Eucgr.K03374 Eucalyptus grandis HOM05D005331 ORTHO05D007596 1.0e-08 63.5 103 39.8
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.3e-08 63.2 77 49.4
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.3e-08 63.2 77 49.4
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.3e-08 63.2 77 49.4
MD11G1286500 Malus domestica HOM05D005331 ORTHO05D007596 1.3e-08 63.2 95 41.1
PSO302G0146 Papaver somniferum HOM05D005331 ORTHO05D007596 1.3e-08 63.2 99 39.4
QL12p021971 Quercus lobata HOM05D005331 ORTHO05D007596 1.3e-08 63.2 73 46.6
RcHm_v2.0_Chr6g0291131 Rosa chinensis HOM05D005331 ORTHO05D007596 1.3e-08 63.2 77 48.1
Cpa.g.sc52.30 Carica papaya HOM05D005331 ORTHO05D007596 1.7e-08 62.8 103 39.8
Nitab4.5_0010448g0040 Nicotiana tabacum HOM05D005331 ORTHO05D007596 1.7e-08 62.8 98 38.8
Ciclev10023848m.g Citrus clementina HOM05D005331 ORTHO05D007596 2.2e-08 62.4 103 36.9
Cc01_g19540 Coffea canephora HOM05D005331 ORTHO05D007596 2.2e-08 62.4 75 46.7
MELO3C014403.2 Cucumis melo HOM05D005331 ORTHO05D007596 2.2e-08 62.4 75 46.7
Oeu028078.2 Olea europaea HOM05D005331 ORTHO05D007596 2.2e-08 62.4 79 43.0
Rhsim01G0275000 Rhododendron simsii HOM05D005331 ORTHO05D007596 3.8e-08 61.6 97 38.1
CDE04G0111 Ceratophyllum demersum HOM05D005331 ORTHO05D007596 5.0e-08 61.2 82 43.9
SGA_v2.0_scaffold81G25989 Striga asiatica HOM05D005331 ORTHO05D007596 5.0e-08 61.2 79 40.5
Phvul.001G150500 Phaseolus vulgaris HOM05D005331 ORTHO05D007596 6.5e-08 60.8 72 48.6
TWI14G1044 Tripterygium wilfordii HOM05D005331 ORTHO05D007596 6.5e-08 60.8 104 38.5
Atru.chr5.1429 Acer truncatum HOM05D005331 ORTHO05D007596 8.5e-08 60.5 104 39.4
EL10Ac4g08368 Beta vulgaris HOM05D005331 ORTHO05D007596 8.5e-08 60.5 73 45.2
CANSAT25G3094 Cannabis sativa HOM05D005331 ORTHO05D007596 1.1e-07 60.1 100 37.0
Actinidia24888 Actinidia chinensis HOM05D005331 ORTHO05D007596 1.5e-07 59.7 77 42.9
Ah.04g164200 Amaranthus hybridus HOM05D005331 ORTHO05D007596 1.5e-07 59.7 96 38.5
arahy.Tifrunner.gnm1.ann1.BTF7DQ Arachis hypogaea HOM05D005331 ORTHO05D007596 1.5e-07 59.7 75 42.7
arahy.Tifrunner.gnm1.ann1.Z72PTZ Arachis hypogaea HOM05D005331 ORTHO05D007596 1.5e-07 59.7 75 42.7
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 1.5e-07 59.7 100 39.0
Zm00001eb287470 Zea mays HOM05D005331 ORTHO05D007596 1.5e-07 59.7 68 51.5
CAN.G567.46 Capsicum annuum HOM05D005331 ORTHO05D007596 1.9e-07 59.3 96 37.5
Glyma.03G153100 Glycine max HOM05D005331 ORTHO05D007596 1.9e-07 59.3 72 47.2
Glyma.19G155500 Glycine max HOM05D005331 ORTHO05D007596 1.9e-07 59.3 72 47.2
CiPaw.08G104900 Carya illinoinensis HOM05D005331 ORTHO05D007596 2.5e-07 58.9 77 45.5
Lalb_Chr01g0013751 Lupinus albus HOM05D005331 ORTHO05D007596 2.5e-07 58.9 75 44.0
Manes.05G075600 Manihot esculenta HOM05D005331 ORTHO05D007596 2.5e-07 58.9 75 42.7
PGR044G2121 Punica granatum HOM05D005331 ORTHO05D007596 2.5e-07 58.9 87 40.2
VMungo1383G2522 Vigna mungo HOM05D005331 ORTHO05D007596 2.5e-07 58.9 72 47.2
Lj2A469T42 Lonicera japonica HOM05D005331 ORTHO05D007596 3.2e-07 58.5 78 42.3
Medtr7g094800 Medicago truncatula HOM05D005331 ORTHO05D007596 3.2e-07 58.5 87 40.2
Nitab4.5_0001028g0020 Nicotiana tabacum HOM05D005331 ORTHO05D007596 3.2e-07 58.5 71 43.7
Lsat_1_v5_gn_9_3840 Lactuca sativa HOM05D005331 ORTHO05D007596 4.2e-07 58.2 71 46.5
AUR62018058 Chenopodium quinoa HOM05D005331 ORTHO05D007596 7.2e-07 57.4 76 42.1
ECA247G2661 Erigeron canadensis HOM05D005331 ORTHO05D007596 7.2e-07 57.4 94 39.4
HanXRQChr13g0386871 Helianthus annuus HOM05D005331 ORTHO05D007596 7.2e-07 57.4 81 43.2
Lj1g0019807 Lotus japonicus HOM05D005331 ORTHO05D007596 7.2e-07 57.4 76 43.4
Psat3g064480 Pisum sativum HOM05D005331 ORTHO05D007596 7.2e-07 57.4 78 42.3
TPR.G6149 Trifolium pratense HOM05D005331 ORTHO05D007596 7.2e-07 57.4 78 42.3
HPP92_001334 Vanilla planifolia HOM05D005331 ORTHO05D007596 7.2e-07 57.4 75 42.7
CAN.G904.2 Capsicum annuum HOM05D005331 ORTHO05D018710 9.4e-07 57.0 95 36.8
HanXRQChr10g0282731 Helianthus annuus HOM05D005331 ORTHO05D007596 9.4e-07 57.0 81 43.2
Os05g0397700 Oryza sativa ssp. japonica HOM05D005331 ORTHO05D007596 9.4e-07 57.0 68 45.6
Peaxi162Scf01622g00017 Petunia axillaris HOM05D005331 ORTHO05D007596 9.4e-07 57.0 96 35.4
Solyc09g065120.4 Solanum lycopersicum HOM05D005331 ORTHO05D007596 9.4e-07 57.0 96 36.5
Potri.002G053900 Populus trichocarpa HOM05D005331 ORTHO05D007596 1.2e-06 56.6 106 34.9
SalBow6G0673 Salvia bowleyana HOM05D005331 ORTHO05D007596 1.2e-06 56.6 82 37.8
AUR62015257 Chenopodium quinoa HOM05D005331 ORTHO05D007596 1.6e-06 56.2 69 44.9
Sopen09g026840 Solanum pennellii HOM05D005331 ORTHO05D007596 1.6e-06 56.2 96 36.5
Ca_08578_v3 Cicer arietinum L. HOM05D005331 ORTHO05D007596 2.1e-06 55.8 78 41.0
ATR0626G344 Amborella trichopoda HOM05D005331 ORTHO05D007596 2.7e-06 55.5 93 36.6
A10p17750 Brassica napus HOM05D005331 ORTHO05D018710 3.6e-06 55.1 39 64.1
C06p10110 Brassica napus HOM05D005331 ORTHO05D018710 3.6e-06 55.1 39 64.1
Hund10478 Selenicereus undatus HOM05D005331 ORTHO05D007596 6.1e-06 54.3 75 41.3
Pp3c15_8820 Physcomitrium patens HOM05D005331 ORTHO05D007596 8.0e-06 53.9 78 43.6


User provided reference genes

Program Settings