Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 1.1e-153 546.6 283 100.0
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 1.0e-138 496.9 282 94.0
BcaB06g28487 Brassica carinata HOM05D011670 ORTHO05D027357 2.3e-90 336.3 183 95.6
BcaB06g28484 Brassica carinata HOM05D011670 ORTHO05D027357 1.5e-60 237.3 132 97.0
BcaB06g28485 Brassica carinata HOM05D011670 ORTHO05D001112 7.3e-52 208.4 150 78.0
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-40 168.7 214 48.6
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 2.1e-27 127.1 228 39.9
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-26 124.0 200 43.0
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 2.4e-26 123.6 275 35.6
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 1.2e-25 121.3 203 40.4
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 1.4e-23 114.4 140 50.7
BcaC09g50328 Brassica carinata HOM05D000018 ORTHO05D008577 2.5e-23 113.6 190 41.6
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 2.7e-22 110.2 204 40.2
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 2.7e-22 110.2 204 40.2
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 1.3e-21 107.8 139 49.6
BcaC06g33612 Brassica carinata HOM05D011670 ORTHO05D031889 2.2e-19 100.5 129 48.8
BolC1t02602H Brassica oleracea HOM05D011670 ORTHO05D031889 6.5e-16 89.0 103 47.6
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 3.0e-13 80.1 127 40.2
C01p26600 Brassica napus HOM05D011670 ORTHO05D031889 7.4e-12 75.5 111 42.3
BcaC07g36896 Brassica carinata HOM05D004566 ORTHO05D000925 1.7e-11 74.3 129 42.6
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 4.8e-11 72.8 242 26.9
BolC9t59809H Brassica oleracea HOM05D016815 ORTHO05D012489 1.1e-10 71.6 116 42.2
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 5.3e-10 69.3 69 53.6
BcaB06g25898 Brassica carinata HOM05D011670 ORTHO05D012489 6.9e-10 68.9 120 42.5
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-10 68.6 136 36.0
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 1.5e-09 67.8 92 46.7
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 2.0e-09 67.4 58 56.9
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 5.9e-09 65.9 59 57.6
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 7.7e-09 65.5 201 30.3
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-08 64.7 149 36.2
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-08 63.9 116 39.7
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 2.2e-08 63.9 131 34.4
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 2.2e-08 63.9 51 66.7
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 2.2e-08 63.9 131 34.4
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 2.9e-08 63.5 86 44.2
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 2.9e-08 63.5 86 44.2
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 2.9e-08 63.5 55 56.4
BcaC02g10496 Brassica carinata HOM05D011670 ORTHO05D012489 5.0e-08 62.8 51 62.7
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 5.0e-08 62.8 53 64.2
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 5.0e-08 62.8 51 64.7
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 6.5e-08 62.4 64 50.0
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 8.5e-08 62.0 53 66.0
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.1e-07 61.6 55 58.2
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 1.1e-07 61.6 91 41.8
BcaB03g14365 Brassica carinata HOM05D011670 ORTHO05D027274 1.4e-07 61.2 71 50.7
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 1.9e-07 60.8 54 59.3
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 2.5e-07 60.5 81 42.0
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 3.2e-07 60.1 93 40.9
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 3.2e-07 60.1 93 40.9
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-07 59.7 62 48.4
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 4.2e-07 59.7 46 67.4
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 5.5e-07 59.3 124 36.3
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 7.2e-07 58.9 73 43.8
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 7.2e-07 58.9 46 63.0
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 7.2e-07 58.9 86 39.5
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 2.7e-06 57.0 113 37.2
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-06 56.2 63 46.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 4.7e-06 56.2 208 27.9


User provided reference genes

Program Settings