Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p60280 Brassica napus HOM05D002006 ORTHO05D021918 1.2e-74 283.1 146 100.0
BolC4t27527H Brassica oleracea HOM05D002006 ORTHO05D021918 1.2e-74 283.1 146 100.0
BcaB06g28480 Brassica carinata HOM05D002006 ORTHO05D021918 2.9e-60 235.3 254 57.1
A04p23790 Brassica napus HOM05D002006 ORTHO05D021918 6.3e-39 164.5 224 48.7
BcaB06g28405 Brassica carinata HOM05D002006 ORTHO05D021918 5.5e-27 124.8 231 39.8
AL4G38290 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 1.5e-24 116.7 197 38.6
BraA04t17903Z Brassica rapa HOM05D002006 ORTHO05D002128 3.3e-24 115.5 397 29.0
AL4G16550 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 1.7e-23 113.2 194 37.1
Sp4g22790 Schrenkiella parvula HOM05D002006 ORTHO05D002128 4.8e-23 111.7 201 36.8
BolC4t21846H Brassica oleracea HOM05D002006 ORTHO05D002128 6.3e-23 111.3 194 36.6
BraA03t11497Z Brassica rapa HOM05D002006 ORTHO05D002128 6.3e-23 111.3 198 38.9
BraA05t19167Z Brassica rapa HOM05D002006 ORTHO05D002128 8.2e-23 110.9 198 36.4
AT2G40450 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 1.8e-22 109.8 194 37.6
AL4G16510 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 2.4e-22 109.4 194 36.6
BcaC01g05401 Brassica carinata HOM05D002006 ORTHO05D002128 3.1e-22 109.0 198 38.4
C03p26960 Brassica napus HOM05D002006 ORTHO05D002128 4.1e-22 108.6 198 38.4
C04p01960 Brassica napus HOM05D002006 ORTHO05D002128 4.1e-22 108.6 194 36.1
AL8G21400 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 9.1e-22 107.5 189 38.1
C04p60230 Brassica napus HOM05D002006 ORTHO05D002128 1.5e-21 106.7 159 45.3
Carub.0008s0809 Capsella rubella HOM05D002006 ORTHO05D002128 3.4e-21 105.5 189 38.6
AT5G48510 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 4.5e-21 105.1 188 37.2
BolC3t15079H Brassica oleracea HOM05D002006 ORTHO05D002128 1.0e-20 104.0 202 36.1
A03p22730 Brassica napus HOM05D002006 ORTHO05D002128 1.3e-20 103.6 192 38.5
BolC3t15078H Brassica oleracea HOM05D002006 ORTHO05D002128 2.2e-20 102.8 209 36.8
BraA04t17904Z Brassica rapa HOM05D002006 ORTHO05D021918 2.9e-20 102.4 57 93.0
Sp7g13200 Schrenkiella parvula HOM05D002006 ORTHO05D002128 3.8e-20 102.1 194 36.1
Aa31sc126G20 Aethionema arabicum HOM05D002006 ORTHO05D002128 5.0e-20 101.7 189 36.5
BcaB02g07843 Brassica carinata HOM05D002006 ORTHO05D002128 5.0e-20 101.7 196 36.2
A05p01700 Brassica napus HOM05D002006 ORTHO05D002128 5.0e-20 101.7 198 35.4
Carub.0004s2270 Capsella rubella HOM05D002006 ORTHO05D002128 5.0e-20 101.7 196 37.8
C03p26980 Brassica napus HOM05D002006 ORTHO05D002128 1.9e-19 99.8 193 38.3
BcaC02g12714 Brassica carinata HOM05D002006 ORTHO05D002128 2.5e-19 99.4 162 40.1
BolC3t15080H Brassica oleracea HOM05D002006 ORTHO05D002128 2.5e-19 99.4 193 38.3
A05p16920 Brassica napus HOM05D002006 ORTHO05D002128 3.2e-19 99.0 199 35.2
BcaB06g28475 Brassica carinata HOM05D002006 ORTHO05D002128 4.2e-19 98.6 198 38.9
Thhalv10029325m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 4.2e-19 98.6 189 39.2
CARHR135560 Cardamine hirsuta HOM05D002006 ORTHO05D002128 3.6e-18 95.5 191 36.1
BcaB06g28404 Brassica carinata HOM05D002006 ORTHO05D002128 4.7e-18 95.1 191 37.7
Aa31LG5G19100 Aethionema arabicum HOM05D002006 ORTHO05D002128 6.1e-18 94.7 193 35.2
A03p22740 Brassica napus HOM05D002006 ORTHO05D002128 8.0e-18 94.4 193 37.3
BraA04t17902Z Brassica rapa HOM05D002006 ORTHO05D002128 1.0e-17 94.0 192 36.5
Sp1g34650 Schrenkiella parvula HOM05D002006 ORTHO05D002128 1.4e-17 93.6 198 34.3
C04p60210 Brassica napus HOM05D002006 ORTHO05D002128 3.0e-17 92.4 192 38.0
BraA03t11498Z Brassica rapa HOM05D002006 ORTHO05D002128 3.9e-17 92.0 193 36.8
Thhalv10017581m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 6.7e-17 91.3 196 35.2
AL8G21380 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 8.8e-17 90.9 189 36.5
Thhalv10012008m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 1.1e-16 90.5 205 32.7
A04p23770 Brassica napus HOM05D002006 ORTHO05D002128 2.0e-16 89.7 193 36.8
Thhalv10017873m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 3.3e-16 89.0 168 36.3
Carub.0004s0485 Capsella rubella HOM05D002006 ORTHO05D002128 4.4e-16 88.6 182 31.9
Thhalv10017253m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 5.7e-16 88.2 189 37.6
Thhalv10017692m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 5.7e-16 88.2 185 38.9
Carub.0004s0484 Capsella rubella HOM05D002006 ORTHO05D002128 7.4e-16 87.8 189 31.7
C03p26970 Brassica napus HOM05D002006 ORTHO05D002128 2.2e-15 86.3 78 56.4
Aa31LG5G19080 Aethionema arabicum HOM05D002006 ORTHO05D002128 4.8e-15 85.1 189 31.7
Thhalv10011969m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 4.8e-15 85.1 172 36.0
BcaB01g03541 Brassica carinata HOM05D002006 ORTHO05D002128 6.3e-15 84.7 189 34.4
Aa31sc351G30 Aethionema arabicum HOM05D002006 ORTHO05D002128 1.2e-13 80.5 197 32.0
Carub.0005s0831 Capsella rubella HOM05D002006 ORTHO05D002128 1.6e-13 80.1 189 33.9
C04p01980 Brassica napus HOM05D002006 ORTHO05D002128 2.0e-13 79.7 183 32.2
BolC4t21848H Brassica oleracea HOM05D002006 ORTHO05D002128 2.0e-13 79.7 183 32.2
Aa31sc236G40 Aethionema arabicum HOM05D002006 ORTHO05D002128 2.6e-13 79.3 187 31.6
BraA05t19168Z Brassica rapa HOM05D002006 ORTHO05D002128 3.5e-13 79.0 181 32.6
AL4G38280 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 7.7e-13 77.8 68 61.8
A05p01710 Brassica napus HOM05D002006 ORTHO05D002128 1.3e-12 77.0 177 32.2
BolC4t27524H Brassica oleracea HOM05D002006 ORTHO05D002128 1.7e-12 76.6 67 59.7
BraA04t17900Z Brassica rapa HOM05D002006 ORTHO05D002128 1.7e-12 76.6 66 60.6
Carub.0004s0486 Capsella rubella HOM05D002006 ORTHO05D002128 2.2e-12 76.3 170 31.2
Sp6g04670 Schrenkiella parvula HOM05D002006 ORTHO05D002128 2.2e-12 76.3 198 33.3
CARHR253390 Cardamine hirsuta HOM05D002006 ORTHO05D002128 2.9e-12 75.9 192 32.8
BolC4t27522H Brassica oleracea HOM05D002006 ORTHO05D002128 6.5e-12 74.7 66 60.6
AT3G29740 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 1.1e-11 73.9 65 60.0
BcaC02g12715 Brassica carinata HOM05D002006 ORTHO05D002128 5.5e-11 71.6 66 53.0
Thhalv10017689m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 1.6e-10 70.1 198 30.8
THA.LOC104812138 Tarenaya hassleriana HOM05D002006 ORTHO05D002128 2.1e-10 69.7 198 29.8
A03p66000 Brassica napus HOM05D002006 ORTHO05D002128 8.0e-10 67.8 197 32.0
BraA03t15654Z Brassica rapa HOM05D002006 ORTHO05D002128 8.0e-10 67.8 197 32.0
Aa31sc26G50 Aethionema arabicum HOM05D002006 ORTHO05D002128 3.0e-09 65.9 190 31.1
AL6G47800 Arabidopsis lyrata HOM05D000070 ORTHO05D005950 4.0e-09 65.5 78 46.2
Aa31sc19G50 Aethionema arabicum HOM05D002006 ORTHO05D002128 8.8e-09 64.3 190 30.0
CARHR253260 Cardamine hirsuta HOM05D002006 ORTHO05D002128 1.2e-08 63.9 63 54.0
Thhalv10029229m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 2.0e-08 63.2 67 52.2
THA.LOC104801406 Tarenaya hassleriana HOM05D002006 ORTHO05D002128 1.3e-07 60.5 191 27.7
AL4G16530 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 2.2e-07 59.7 188 29.3
BcaC08g44769 Brassica carinata HOM05D002006 ORTHO05D024234 2.2e-07 59.7 190 24.7
A07p22840 Brassica napus HOM05D002006 ORTHO05D024234 2.2e-07 59.7 188 24.5
BraA07t29949Z Brassica rapa HOM05D002006 ORTHO05D024234 2.2e-07 59.7 188 24.5
C06p23390 Brassica napus HOM05D002006 ORTHO05D024234 3.7e-07 58.9 190 24.7
CARHR000710 Cardamine hirsuta HOM05D002006 ORTHO05D002128 6.3e-07 58.2 186 27.4
Aa31sc689G10 Aethionema arabicum HOM05D002006 ORTHO05D002128 1.4e-06 57.0 176 29.5
THA.LOC104824348 Tarenaya hassleriana HOM05D002006 ORTHO05D002128 1.4e-06 57.0 191 27.7
Thhalv10006174m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 1.8e-06 56.6 179 24.0
Gorai.012G016600 Gossypium raimondii HOM05D002006 ORTHO05D002128 1.8e-06 56.6 184 24.5
Carub.0001s0058 Capsella rubella HOM05D002006 ORTHO05D002128 3.1e-06 55.8 186 25.3
Thhalv10012296m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 3.1e-06 55.8 149 32.2
BcaB01g03542 Brassica carinata HOM05D002006 ORTHO05D002128 4.1e-06 55.5 56 50.0
Gohir.A05G401600 Gossypium hirsutum HOM05D002006 ORTHO05D002128 5.3e-06 55.1 182 26.4
A04p23740 Brassica napus HOM05D002006 ORTHO05D002128 7.0e-06 54.7 102 44.1
Gohir.D04G014150 Gossypium hirsutum HOM05D002006 ORTHO05D002128 7.0e-06 54.7 181 24.3
AT1G01640 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 9.1e-06 54.3 186 25.8


User provided reference genes

Program Settings