Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 3.0e-290 1001.1 504 100.0
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.5e-281 971.5 505 97.2
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 6.3e-272 940.3 504 95.4
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.7e-269 932.2 509 93.1
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 3.8e-269 931.0 507 93.3
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.2e-235 819.7 514 83.3
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.8e-235 818.5 506 82.8
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 8.0e-235 817.0 514 82.7
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.0e-234 816.6 506 81.2
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.8e-234 815.8 508 82.5
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 4.4e-233 811.2 512 81.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 7.3e-220 767.3 514 76.7
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.7e-208 729.6 512 73.6
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 8.4e-176 620.9 451 74.3
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 2.7e-174 615.9 517 61.3
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.1e-172 610.5 483 63.8
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.5e-172 610.1 521 61.8
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 1.5e-172 610.1 517 61.5
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 1.5e-169 600.1 492 63.0
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 3.8e-168 595.5 516 60.1
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 3.8e-168 595.5 511 60.7
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 5.0e-168 595.1 457 65.2
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 8.5e-168 594.3 521 58.5
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 8.5e-168 594.3 513 60.4
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.9e-167 593.2 516 60.1
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 9.3e-167 590.9 517 60.0
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.2e-166 590.5 481 62.6
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.2e-166 590.5 514 58.6
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.6e-166 590.1 468 62.8
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.6e-166 590.1 513 59.8
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 2.1e-166 589.7 453 64.2
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 2.1e-166 589.7 521 58.3
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 6.1e-166 588.2 506 58.9
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 7.9e-166 587.8 517 58.2
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.3e-165 587.0 453 63.6
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 2.3e-165 586.3 476 62.2
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 3.0e-165 585.9 514 59.3
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 3.0e-165 585.9 516 59.9
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.9e-164 583.2 513 59.1
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 4.3e-164 582.0 522 57.5
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 5.7e-164 581.6 506 58.9
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 5.7e-164 581.6 452 63.7
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.7e-164 580.9 455 63.1
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.8e-163 579.3 474 62.2
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 3.7e-163 578.9 511 59.5
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 3.7e-163 578.9 460 62.6
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 6.3e-163 578.2 459 62.7
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 8.2e-163 577.8 453 63.6
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.1e-162 577.4 504 59.1
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 2.4e-162 576.2 453 63.8
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 3.1e-162 575.9 486 60.3
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 5.3e-162 575.1 511 59.1
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 5.3e-162 575.1 485 60.0
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 6.9e-162 574.7 544 57.5
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.2e-161 573.9 485 59.8
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.2e-161 573.9 513 56.9
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 1.5e-161 573.5 451 62.5
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 5.9e-161 571.6 490 59.2
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 5.9e-161 571.6 513 59.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.0e-160 570.9 451 64.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.0e-160 570.9 518 57.5
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.3e-160 570.5 485 59.6
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.7e-160 570.1 519 56.5
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.2e-160 569.7 506 57.9
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.8e-160 568.9 460 62.2
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.1e-159 567.4 453 62.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 2.5e-159 566.2 516 57.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 3.2e-159 565.8 460 62.2
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 7.2e-159 564.7 465 59.6
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 7.2e-159 564.7 449 62.1
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 9.4e-159 564.3 449 62.1
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 4.6e-158 562.0 456 62.5
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 4.6e-158 562.0 457 62.1
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.4e-157 560.5 455 62.6
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.3e-157 559.7 502 58.2
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.5e-156 557.0 453 60.9
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 2.6e-156 556.2 449 61.7
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 5.7e-156 555.1 460 59.3
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.2e-155 553.1 482 58.5
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 4.8e-155 552.0 460 60.2
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.3e-155 551.6 517 55.3
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 3.1e-154 549.3 467 59.3
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 2.0e-153 546.6 430 63.0
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 5.9e-153 545.0 468 59.4
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.9e-152 542.7 451 59.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 6.5e-152 541.6 506 55.9
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.9e-151 540.0 487 58.7
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.1e-146 522.7 464 58.6
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.2e-145 520.8 457 58.0
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 2.6e-145 519.6 436 59.2
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 2.2e-144 516.5 422 61.4
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 8.0e-142 508.1 511 53.4
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 3.7e-139 499.2 424 57.8
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 5.9e-129 465.3 404 56.9
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 2.0e-124 450.3 460 51.5
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 2.0e-124 450.3 426 53.1
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 5.7e-124 448.7 387 59.7
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.1e-122 443.0 424 52.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 4.1e-122 442.6 360 58.9
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 4.3e-103 379.4 408 51.5
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 2.8e-102 376.7 432 44.9
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.5e-95 354.4 298 61.1
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.9e-87 327.4 259 57.9
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.2e-84 318.2 472 39.0
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.1e-69 268.5 429 40.6
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.4e-66 257.3 194 67.0
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.8e-62 243.8 211 62.6
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.8e-62 243.8 433 34.2
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.4e-61 241.5 436 33.0
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.3e-56 224.2 155 72.3
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 2.0e-52 211.1 161 67.7
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 7.9e-41 172.6 178 46.1
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 5.2e-32 143.3 224 37.9
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 1.0e-27 129.0 131 53.4
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-26 124.4 130 53.1
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 3.6e-25 120.6 230 34.3
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.0e-23 114.8 230 32.2
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 6.3e-22 109.8 97 58.8
C02p15210 Brassica napus HOM05D018598 ORTHO05D103804 7.0e-13 79.7 40 95.0
C01p38520 Brassica napus HOM05D018598 ORTHO05D098635 5.9e-12 76.6 40 92.5
C02p38610 Brassica napus HOM05D018598 ORTHO05D097828 5.9e-12 76.6 40 92.5
C04p14220 Brassica napus HOM05D018598 ORTHO05D101392 5.9e-12 76.6 40 92.5
C05p40560 Brassica napus HOM05D018598 ORTHO05D096464 5.9e-12 76.6 40 92.5
BolC5t30236H Brassica oleracea HOM05D018598 ORTHO05D042499 5.9e-12 76.6 40 92.5
C05p46340 Brassica napus HOM05D018598 ORTHO05D042499 2.9e-11 74.3 40 90.0
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 5.2e-08 63.5 145 29.7


User provided reference genes

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