Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p58400 Brassica napus HOM05D009418 ORTHO05D017574 3.9e-54 214.5 108 100.0
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 2.6e-50 201.8 107 94.4
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 2.3e-46 188.7 106 88.7
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 2.3e-46 188.7 106 88.7
BraA05t19812Z Brassica rapa HOM05D000017 ORTHO05D000013 1.4e-22 109.8 98 54.1
A04p22200 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-22 109.4 109 52.3
BolC8t47293H Brassica oleracea HOM05D000017 ORTHO05D000013 1.1e-19 100.1 101 52.5
BolC7t43637H Brassica oleracea HOM05D000017 ORTHO05D000013 1.5e-18 96.3 108 45.4
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 4.5e-18 94.7 106 47.2
BolC6t36137H Brassica oleracea HOM05D000017 ORTHO05D000013 4.5e-18 94.7 106 47.2
C07p09740 Brassica napus HOM05D000017 ORTHO05D000013 1.3e-17 93.2 106 42.5
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 1.3e-17 93.2 82 52.4
Sp4g09850 Schrenkiella parvula HOM05D006289 ORTHO05D000013 2.2e-17 92.4 79 53.2
BolC1t02114H Brassica oleracea HOM05D000017 ORTHO05D000013 1.1e-16 90.1 107 43.0
A02p37010 Brassica napus HOM05D000017 ORTHO05D000013 1.4e-16 89.7 98 45.9
BraA02t08688Z Brassica rapa HOM05D000017 ORTHO05D000013 1.4e-16 89.7 98 45.9
A02p12550 Brassica napus HOM05D006289 ORTHO05D000013 3.2e-16 88.6 86 50.0
BraA10t43451Z Brassica rapa HOM05D006289 ORTHO05D000013 3.2e-16 88.6 86 50.0
BraA05t21308Z Brassica rapa HOM05D006289 ORTHO05D000013 4.2e-16 88.2 86 50.0
A08p09560 Brassica napus HOM05D000017 ORTHO05D000013 5.5e-16 87.8 108 40.7
A09p34770 Brassica napus HOM05D000017 ORTHO05D000013 7.2e-16 87.4 82 50.0
A05p28240 Brassica napus HOM05D006289 ORTHO05D000013 4.7e-15 84.7 86 47.7
BraA05t21705Z Brassica rapa HOM05D006289 ORTHO05D000013 4.7e-15 84.7 86 47.7
BraA07t28815Z Brassica rapa HOM05D000017 ORTHO05D000013 4.7e-15 84.7 109 40.4
A09p28370 Brassica napus HOM05D000017 ORTHO05D000013 1.0e-14 83.6 108 41.7
A02p27280 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-14 82.8 95 41.1
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 2.3e-14 82.4 82 48.8
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 2.3e-14 82.4 82 48.8
A06p16010 Brassica napus HOM05D000017 ORTHO05D000013 3.0e-14 82.0 114 43.0
A10p07440 Brassica napus HOM05D006289 ORTHO05D000013 1.5e-13 79.7 85 45.9
BraA08t34503Z Brassica rapa HOM05D000017 ORTHO05D000013 2.6e-13 79.0 108 38.9
BraA09t36745Z Brassica rapa HOM05D006289 ORTHO05D000013 7.0e-11 70.9 67 47.8
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 3.5e-10 68.6 33 97.0
BolC2t08170H Brassica oleracea HOM05D014889 ORTHO05D000013 1.0e-09 67.0 101 35.6
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 5.0e-09 64.7 84 41.7
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 8.5e-09 63.9 94 35.1
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 1.1e-08 63.5 94 35.1
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 1.5e-08 63.2 100 38.0
C06p05160 Brassica napus HOM05D000017 ORTHO05D000013 2.5e-08 62.4 94 37.2
C07p60300 Brassica napus HOM05D014889 ORTHO05D000013 9.4e-08 60.5 84 35.7
Gorai.013G104200 Gossypium raimondii HOM05D000017 ORTHO05D000013 3.6e-07 58.5 79 35.4
C01p14300 Brassica napus HOM05D000017 ORTHO05D000013 6.1e-07 57.8 77 35.1
C02p27850 Brassica napus HOM05D000017 ORTHO05D000013 6.1e-07 57.8 77 35.1
C07p19290 Brassica napus HOM05D000017 ORTHO05D000013 6.1e-07 57.8 77 35.1
BolC2t08829H Brassica oleracea HOM05D009117 ORTHO05D012204 6.1e-07 57.8 77 35.1
A09p24240 Brassica napus HOM05D000017 ORTHO05D000013 8.0e-07 57.4 77 33.8
C05p38720 Brassica napus HOM05D034814 ORTHO05D039365 1.0e-06 57.0 60 43.3
C01p25770 Brassica napus HOM05D000017 ORTHO05D000013 1.4e-06 56.6 77 35.1
CANSAT11G2016 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 56.6 72 38.9
BraA01t02654Z Brassica rapa HOM05D009117 ORTHO05D000013 1.8e-06 56.2 77 35.1
BraA06t26007Z Brassica rapa HOM05D000017 ORTHO05D000013 1.8e-06 56.2 100 32.0
Duzib138G0626 Durio zibethinus HOM05D000017 ORTHO05D000013 1.8e-06 56.2 79 32.9
A09p17270 Brassica napus HOM05D000017 ORTHO05D000013 2.3e-06 55.8 77 33.8
BraA10t42592Z Brassica rapa HOM05D006289 ORTHO05D000013 2.3e-06 55.8 46 50.0
Pp3c12_23210 Physcomitrium patens HOM05D000017 ORTHO05D000013 2.3e-06 55.8 57 45.6
A02p26130 Brassica napus HOM05D000017 ORTHO05D000013 3.0e-06 55.5 77 33.8
C02p28430 Brassica napus HOM05D000017 ORTHO05D000013 3.0e-06 55.5 77 33.8
Nitab4.5_0011238g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.0e-06 55.5 75 34.7
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.0e-06 55.5 79 31.6
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-06 55.1 75 40.0
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-06 55.1 75 40.0
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 4.0e-06 55.1 77 33.8
THA.LOC104821604 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.0e-06 55.1 82 37.8
Atru.chr6.113 Acer truncatum HOM05D000017 ORTHO05D000013 5.2e-06 54.7 62 41.9
A01p20700 Brassica napus HOM05D000017 ORTHO05D000013 5.2e-06 54.7 77 32.5
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 5.2e-06 54.7 108 30.6
CANSAT56G3678 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 54.7 79 32.9
Nitab4.5_0001730g0080 Nicotiana tabacum HOM05D008577 ORTHO05D010519 5.2e-06 54.7 75 34.7
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 6.7e-06 54.3 108 29.6
A05p27950 Brassica napus HOM05D000017 ORTHO05D000013 6.7e-06 54.3 77 33.8
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 6.7e-06 54.3 80 38.8
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 6.7e-06 54.3 80 37.5
C09p42350 Brassica napus HOM05D009117 ORTHO05D000013 6.7e-06 54.3 77 39.0
BolC9t57114H Brassica oleracea HOM05D009117 ORTHO05D000013 6.7e-06 54.3 77 39.0
BraA05t21217Z Brassica rapa HOM05D000017 ORTHO05D000013 6.7e-06 54.3 108 29.6
FAN28G0297 Fragaria x ananassa HOM05D000017 ORTHO05D000013 6.7e-06 54.3 92 33.7
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 8.8e-06 53.9 80 38.8
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.8e-06 53.9 70 35.7
Sed0000977 Sechium edule HOM05D000017 ORTHO05D000013 8.8e-06 53.9 81 32.1


User provided reference genes

Program Settings