Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p58210 Brassica napus HOM05D002382 ORTHO05D000411 6.4e-106 387.5 206 100.0
BolC6t37172H Brassica oleracea HOM05D000496 ORTHO05D000411 3.4e-22 109.4 129 50.4
A06p37020 Brassica napus HOM05D000496 ORTHO05D000411 1.8e-20 103.6 129 45.7
BcaC07g41265 Brassica carinata HOM05D002382 ORTHO05D019928 2.4e-20 103.2 57 100.0
BolC1t04290H Brassica oleracea HOM05D002382 ORTHO05D019928 9.2e-20 101.3 56 100.0
C08p42690 Brassica napus HOM05D002382 ORTHO05D019928 3.9e-18 95.9 54 94.4
A05p24030 Brassica napus HOM05D002382 ORTHO05D019928 1.1e-17 94.4 54 92.6
A07p05980 Brassica napus HOM05D002382 ORTHO05D019928 1.1e-17 94.4 54 92.6
BraA05t21282Z Brassica rapa HOM05D002382 ORTHO05D019928 1.1e-17 94.4 54 92.6
BolC4t27349H Brassica oleracea HOM05D002382 ORTHO05D019928 9.5e-17 91.3 54 90.7
BolC8t50528H Brassica oleracea HOM05D000003 ORTHO05D000411 8.3e-13 78.2 108 41.7
BcaB03g12607 Brassica carinata HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
BcaC01g01170 Brassica carinata HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
BcaNung00475 Brassica carinata HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
A03p58940 Brassica napus HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
A08p19680 Brassica napus HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
BolC3t21240H Brassica oleracea HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
BraA03t14954Z Brassica rapa HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
BraA08t33926Z Brassica rapa HOM05D002382 ORTHO05D002622 4.6e-11 72.4 57 78.9
C03p89300 Brassica napus HOM05D002382 ORTHO05D002622 6.0e-11 72.0 56 80.4
BcaC04g21635 Brassica carinata HOM05D000003 ORTHO05D001498 3.9e-10 69.3 73 53.4
A01p08620 Brassica napus HOM05D002382 ORTHO05D002622 5.0e-10 68.9 57 75.4
C01p10090 Brassica napus HOM05D002382 ORTHO05D002622 5.0e-10 68.9 57 75.4
BolC1t00967H Brassica oleracea HOM05D002382 ORTHO05D002622 5.0e-10 68.9 57 75.4
BolC8t51809H Brassica oleracea HOM05D002382 ORTHO05D002622 6.6e-10 68.6 57 71.9
Sp7g27290 Schrenkiella parvula HOM05D002382 ORTHO05D002622 6.6e-10 68.6 57 75.4
BcaB08g34878 Brassica carinata HOM05D002382 ORTHO05D002622 1.1e-09 67.8 57 71.9
A09p59190 Brassica napus HOM05D002382 ORTHO05D002622 1.1e-09 67.8 57 71.9
BraA09t41303Z Brassica rapa HOM05D002382 ORTHO05D002622 1.1e-09 67.8 57 71.9
Carub.0003s3401 Capsella rubella HOM05D002382 ORTHO05D002622 1.5e-09 67.4 66 62.1
AL3G48510 Arabidopsis lyrata HOM05D002382 ORTHO05D002622 1.9e-09 67.0 65 63.1
AL7G22990 Arabidopsis lyrata HOM05D002382 ORTHO05D002622 1.9e-09 67.0 57 71.9
AT2G19730 Arabidopsis thaliana HOM05D002382 ORTHO05D002622 1.9e-09 67.0 65 63.1
BcaB03g16754 Brassica carinata HOM05D002382 ORTHO05D002622 3.3e-09 66.2 91 52.7
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 3.3e-09 66.2 75 49.3
BcaC06g36612 Brassica carinata HOM05D002382 ORTHO05D002622 3.3e-09 66.2 91 52.7
C07p02170 Brassica napus HOM05D002382 ORTHO05D002622 3.3e-09 66.2 91 52.7
BolC7t40626H Brassica oleracea HOM05D002382 ORTHO05D002622 3.3e-09 66.2 91 52.7
BolC9t54383H Brassica oleracea HOM05D002382 ORTHO05D002622 3.3e-09 66.2 91 52.7
BraA09t36896Z Brassica rapa HOM05D002382 ORTHO05D002622 3.3e-09 66.2 91 52.7
C09p14830 Brassica napus HOM05D002382 ORTHO05D002622 4.3e-09 65.9 100 49.0
Thhalv10026507m.g Eutrema salsugineum HOM05D002382 ORTHO05D002622 4.3e-09 65.9 57 71.9
BcaC07g41242 Brassica carinata HOM05D002382 ORTHO05D002622 5.6e-09 65.5 57 70.2
C08p42480 Brassica napus HOM05D002382 ORTHO05D002622 5.6e-09 65.5 57 70.2
Thhalv10002093m.g Eutrema salsugineum HOM05D002382 ORTHO05D002622 5.6e-09 65.5 57 70.2
Sp3g33060 Schrenkiella parvula HOM05D002382 ORTHO05D002622 5.6e-09 65.5 57 70.2
BcaC04g22833 Brassica carinata HOM05D002382 ORTHO05D002622 7.3e-09 65.1 98 50.0
A07p01010 Brassica napus HOM05D002382 ORTHO05D002622 7.3e-09 65.1 90 52.2
BraA07t27902Z Brassica rapa HOM05D002382 ORTHO05D002622 7.3e-09 65.1 91 51.6
BcaB01g02503 Brassica carinata HOM05D002382 ORTHO05D002622 9.5e-09 64.7 85 55.3
CARHR110180 Cardamine hirsuta HOM05D002382 ORTHO05D002622 9.5e-09 64.7 66 60.6
Aa31LG2G21020 Aethionema arabicum HOM05D002382 ORTHO05D002622 1.2e-08 64.3 57 66.7
THA.LOC104814597 Tarenaya hassleriana HOM05D002382 ORTHO05D002622 4.7e-08 62.4 63 65.1
Aa31LG8G16700 Aethionema arabicum HOM05D002382 ORTHO05D002622 1.4e-07 60.8 91 49.5
THA.LOC104803990 Tarenaya hassleriana HOM05D002382 ORTHO05D002622 1.4e-07 60.8 55 70.9
Carub.0007s1113 Capsella rubella HOM05D002382 ORTHO05D002622 6.8e-07 58.5 91 48.4
TWI32G1202 Tripterygium wilfordii HOM05D002382 ORTHO05D002622 6.8e-07 58.5 55 65.5
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 1.2e-06 57.8 124 32.3
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 1.5e-06 57.4 52 55.8
AT4G29410 Arabidopsis thaliana HOM05D002382 ORTHO05D002622 2.6e-06 56.6 91 47.3
TWI34G1429 Tripterygium wilfordii HOM05D002382 ORTHO05D002622 4.4e-06 55.8 55 61.8
TWI63G1268 Tripterygium wilfordii HOM05D002382 ORTHO05D002622 5.8e-06 55.5 55 60.0
CARHR237230 Cardamine hirsuta HOM05D002382 ORTHO05D002622 7.5e-06 55.1 57 61.4
BcaB07g32696 Brassica carinata HOM05D002382 ORTHO05D002622 9.9e-06 54.7 37 81.1


User provided reference genes

Program Settings