Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p56580 Brassica napus HOM05D005283 ORTHO05D006769 6.1e-57 223.8 102 100.0
BolC4t27184H Brassica oleracea HOM05D005283 ORTHO05D006769 2.0e-52 208.8 126 80.2
A04p20740 Brassica napus HOM05D005283 ORTHO05D006769 3.0e-32 141.7 138 55.8
BcaC02g08264 Brassica carinata HOM05D005283 ORTHO05D006769 1.8e-29 132.5 70 88.6
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 6.8e-24 114.0 129 48.1
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 6.8e-24 114.0 129 48.1
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 6.8e-24 114.0 129 48.1
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 1.5e-23 112.8 129 47.3
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 1.5e-23 112.8 129 47.3
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 1.5e-23 112.8 129 47.3
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 2.6e-23 112.1 129 48.1
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 2.6e-23 112.1 129 48.1
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 2.6e-23 112.1 129 48.1
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 4.4e-23 111.3 129 47.3
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 5.7e-23 110.9 129 47.3
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 7.5e-23 110.5 129 46.5
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 5.4e-21 104.4 128 44.5
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 3.8e-19 98.2 113 46.0
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 5.0e-19 97.8 129 42.6
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 6.6e-19 97.4 129 42.6
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 8.6e-19 97.1 129 41.9
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 1.5e-18 96.3 129 41.1
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 1.5e-18 96.3 128 42.2
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 1.9e-18 95.9 129 41.1
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 1.9e-18 95.9 129 41.1
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 2.5e-18 95.5 129 41.9
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 2.5e-18 95.5 129 41.9
Sabra10G0008900 Salix brachista HOM05D005283 ORTHO05D006769 4.3e-18 94.7 129 41.9
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 9.5e-18 93.6 129 41.1
Atru.chr4.2851 Acer truncatum HOM05D005283 ORTHO05D006769 9.5e-18 93.6 129 41.1
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 9.5e-18 93.6 129 41.9
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 1.2e-17 93.2 128 41.4
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 1.6e-17 92.8 129 40.3
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 1.6e-17 92.8 129 41.9
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 2.1e-17 92.4 129 41.1
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 2.1e-17 92.4 127 40.9
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 2.1e-17 92.4 129 40.3
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 2.8e-17 92.0 129 40.3
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 3.6e-17 91.7 129 40.3
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 3.6e-17 91.7 129 40.3
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 3.6e-17 91.7 129 41.1
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 3.6e-17 91.7 129 40.3
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 3.6e-17 91.7 129 41.1
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 3.6e-17 91.7 129 40.3
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 3.6e-17 91.7 128 41.4
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 4.7e-17 91.3 128 40.6
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 4.7e-17 91.3 129 41.1
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 6.1e-17 90.9 129 40.3
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 8.0e-17 90.5 129 39.5
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 1.0e-16 90.1 129 41.1
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 1.0e-16 90.1 128 40.6
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 1.0e-16 90.1 129 40.3
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 1.0e-16 90.1 129 39.5
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 1.4e-16 89.7 129 40.3
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 1.4e-16 89.7 129 39.5
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 1.4e-16 89.7 129 38.8
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 1.4e-16 89.7 129 39.5
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 1.4e-16 89.7 129 40.3
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 1.4e-16 89.7 119 41.2
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 1.8e-16 89.4 129 39.5
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 1.8e-16 89.4 129 39.5
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 1.8e-16 89.4 128 40.6
Eucgr.B01324 Eucalyptus grandis HOM05D005283 ORTHO05D006769 1.8e-16 89.4 129 40.3
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 1.8e-16 89.4 129 38.8
TAR633G1238 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.3e-16 89.0 125 41.6
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 2.3e-16 89.0 129 40.3
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 3.0e-16 88.6 129 39.5
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 3.0e-16 88.6 129 39.5
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 3.0e-16 88.6 129 39.5
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 3.0e-16 88.6 129 39.5
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 3.0e-16 88.6 129 39.5
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 3.0e-16 88.6 129 39.5
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 4.0e-16 88.2 129 38.8
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 5.2e-16 87.8 74 56.8
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 5.2e-16 87.8 139 37.4
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 6.8e-16 87.4 129 39.5
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 6.8e-16 87.4 129 39.5
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 6.8e-16 87.4 129 39.5
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 6.8e-16 87.4 129 38.8
Zm00001eb363540 Zea mays HOM05D005283 ORTHO05D006769 6.8e-16 87.4 129 39.5
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 1.2e-15 86.7 135 38.5
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 1.2e-15 86.7 129 38.8
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 1.2e-15 86.7 129 39.5
Lj6A677G73 Lonicera japonica HOM05D005283 ORTHO05D006769 1.5e-15 86.3 144 36.1
GSVIVG01017731001 Vitis vinifera HOM05D005283 ORTHO05D006769 2.6e-15 85.5 128 39.1
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 3.4e-15 85.1 129 37.2
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 4.4e-15 84.7 129 37.2
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 4.4e-15 84.7 129 37.2
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 4.4e-15 84.7 129 37.2
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 5.8e-15 84.3 129 38.8
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 5.8e-15 84.3 129 39.5
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 5.8e-15 84.3 129 39.5
Actinidia40275 Actinidia chinensis HOM05D005283 ORTHO05D006769 1.7e-14 82.8 129 37.2
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 4.9e-14 81.3 129 37.2
Cpa.g.sc66.36 Carica papaya HOM05D005283 ORTHO05D006769 6.4e-14 80.9 81 49.4
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 8.3e-14 80.5 128 37.5
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 1.1e-13 80.1 128 39.1
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 2.4e-13 79.0 129 36.4
CDE05G1280 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 4.1e-13 78.2 128 36.7
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 4.1e-13 78.2 129 36.4
Hma1.2p1_2906F.1_g330120 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 5.4e-13 77.8 108 39.8
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 5.4e-13 77.8 129 36.4
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 1.6e-12 76.3 169 31.4
HPP92_002144 Vanilla planifolia HOM05D005283 ORTHO05D006769 1.6e-12 76.3 108 39.8
FAN07G0879 Fragaria x ananassa HOM05D005283 ORTHO05D006769 3.9e-11 71.6 116 36.2
Pp3c5_16090 Physcomitrium patens HOM05D005283 ORTHO05D006769 1.9e-10 69.3 128 35.2
Rhsim04G0223000 Rhododendron simsii HOM05D005283 ORTHO05D006769 5.6e-10 67.8 183 27.9
SEGI_08317 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 9.5e-10 67.0 134 33.6
Pp3c20_17000 Physcomitrium patens HOM05D005283 ORTHO05D006769 1.2e-09 66.6 128 35.2
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 3.6e-09 65.1 50 58.0
Pp3c6_10590 Physcomitrium patens HOM05D005283 ORTHO05D006769 4.7e-09 64.7 128 33.6
BraA04t17647Z Brassica rapa HOM05D005283 ORTHO05D006769 1.8e-08 62.8 79 46.8
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 9.8e-07 57.0 67 46.3
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 1.7e-06 56.2 50 50.0


User provided reference genes

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