Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 6.1e-200 700.7 367 100.0
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 5.7e-198 694.1 367 98.9
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 3.6e-176 621.7 333 98.5
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.4e-156 555.8 333 88.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.1e-153 547.0 333 88.0
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.4e-148 529.3 335 86.6
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.0e-146 523.9 337 85.8
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.3e-146 523.5 335 86.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 4.0e-135 485.3 354 75.4
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.8e-133 478.8 347 79.3
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.9e-132 476.5 333 77.2
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 9.3e-124 447.6 330 73.3
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.8e-120 435.3 329 72.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.4e-119 433.0 335 71.3
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 5.3e-119 431.8 337 71.5
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 9.0e-119 431.0 333 70.0
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 3.4e-118 429.1 324 72.2
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 4.9e-117 425.2 293 75.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 8.4e-117 424.5 332 71.1
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 5.5e-116 421.8 322 70.5
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 5.5e-116 421.8 329 69.3
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 3.5e-115 419.1 327 72.2
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 3.5e-115 419.1 261 82.0
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 6.0e-115 418.3 295 75.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 7.9e-115 417.9 316 72.2
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 5.1e-114 415.2 293 74.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 6.7e-114 414.8 334 68.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 8.7e-114 414.5 321 69.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.7e-113 411.8 280 76.8
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 7.4e-113 411.4 320 69.7
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 7.4e-113 411.4 322 70.2
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 8.2e-112 407.9 288 73.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.1e-111 407.5 329 69.3
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.1e-111 407.5 330 67.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.1e-111 406.0 329 69.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.1e-111 406.0 329 70.2
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 4.1e-111 405.6 325 68.9
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 5.3e-111 405.2 329 68.7
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 6.9e-111 404.8 297 73.4
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.2e-110 404.1 291 72.5
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.0e-110 403.3 298 70.8
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.6e-110 402.9 332 65.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.4e-110 402.5 329 68.4
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 7.6e-110 401.4 333 66.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 7.6e-110 401.4 316 69.0
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 5.0e-109 398.7 330 66.4
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 6.5e-109 398.3 260 75.8
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.4e-108 397.1 339 65.8
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.4e-108 397.1 334 65.0
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.9e-108 396.7 343 65.6
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.5e-108 396.4 260 75.4
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.5e-108 396.4 308 68.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 3.2e-108 396.0 261 76.2
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.2e-108 396.0 332 65.4
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 7.2e-108 394.8 327 65.4
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 7.2e-108 394.8 322 64.9
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 9.3e-108 394.4 259 78.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 9.3e-108 394.4 297 71.7
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.2e-107 394.0 316 67.7
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.6e-107 393.7 271 74.2
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.8e-106 390.2 323 64.7
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.3e-106 389.8 339 63.1
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.1e-106 388.7 261 77.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.5e-105 386.3 249 78.7
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 4.3e-105 385.6 323 64.1
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.6e-104 383.6 250 80.0
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.2e-104 383.3 331 62.8
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 2.8e-104 382.9 344 62.8
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.7e-104 382.5 332 63.9
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 8.2e-104 381.3 330 65.5
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 8.2e-104 381.3 287 71.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.8e-103 380.2 332 63.3
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 5.3e-103 378.6 320 65.9
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 5.3e-103 378.6 290 70.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 9.1e-103 377.9 296 67.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.0e-102 376.7 236 80.5
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.6e-102 376.3 336 62.8
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.3e-101 374.0 332 62.0
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.7e-101 373.6 304 65.1
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 2.2e-101 373.2 330 65.2
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.2e-100 369.4 353 60.9
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.2e-100 369.4 330 64.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.7e-99 366.3 238 77.7
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.0e-97 360.1 337 61.7
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-94 350.9 250 72.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 3.8e-93 345.9 289 64.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 3.8e-93 345.9 259 68.0
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.7e-91 339.7 270 65.9
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 7.9e-91 338.2 269 66.2
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 6.7e-90 335.1 288 62.5
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.7e-89 332.0 252 72.2
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 4.8e-88 328.9 221 72.9
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.4e-87 326.6 261 66.7
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 4.5e-86 322.4 235 69.8
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.0e-85 321.2 332 57.2
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 3.1e-79 299.7 216 65.3
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.1e-79 299.3 297 59.3
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.5e-78 296.2 219 71.7
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 9.4e-76 288.1 260 56.2
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.3e-74 283.5 260 56.2
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.2e-74 282.3 188 77.7
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.7e-72 277.3 264 53.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 5.0e-69 265.8 257 59.9
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.2e-64 250.4 251 53.0
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.4e-63 246.9 263 49.8
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.5e-60 237.7 280 48.6
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.6e-59 234.2 249 53.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.0e-58 229.9 253 49.4
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.9e-53 213.0 129 83.7
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.5e-49 201.1 251 42.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 8.6e-45 185.3 244 44.7
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.7e-43 179.5 171 63.2
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.3e-40 171.4 246 39.4
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 7.8e-38 162.2 125 68.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.3e-24 118.2 244 29.9
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.0e-21 108.6 288 34.0
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 5.6e-20 102.8 253 31.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 2.1e-06 57.8 32 93.8


User provided reference genes

Program Settings