Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 1.1e-145 520.4 372 100.0
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 2.2e-141 506.1 386 95.6
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 1.1e-116 424.1 384 85.9
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 1.8e-82 310.5 382 73.8
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 1.9e-79 300.4 378 67.7
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 7.1e-71 271.9 177 85.9
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 7.8e-70 268.5 180 82.8
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 9.6e-68 261.5 173 84.4
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 3.6e-67 259.6 182 79.1
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 2.4e-66 256.9 174 82.2
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 1.5e-65 254.2 177 80.2
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 1.3e-64 251.1 184 75.0
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 1.7e-64 250.8 182 76.4
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 1.9e-63 247.3 139 93.5
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 4.2e-63 246.1 182 75.8
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 1.2e-62 244.6 175 78.9
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 1.6e-62 244.2 127 97.6
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 3.5e-62 243.0 127 96.9
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 4.6e-62 242.7 127 96.9
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 4.6e-62 242.7 127 96.9
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 1.8e-61 240.7 178 76.4
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 3.0e-61 240.0 127 96.1
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 3.9e-61 239.6 127 96.1
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 3.9e-61 239.6 127 96.1
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 6.7e-61 238.8 168 79.2
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 6.7e-61 238.8 172 76.7
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 6.7e-61 238.8 168 79.2
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 7.4e-60 235.3 167 79.0
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 1.6e-59 234.2 127 93.7
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 1.6e-59 234.2 127 93.7
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 2.1e-59 233.8 172 75.6
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 2.8e-59 233.4 127 93.7
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 4.8e-59 232.6 123 95.9
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 1.7e-56 224.2 178 73.0
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 2.9e-56 223.4 162 75.9
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 1.1e-55 221.5 168 71.4
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 1.1e-55 221.5 164 73.2
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 1.1e-55 221.5 164 72.6
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 7.1e-55 218.8 128 85.9
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 7.1e-55 218.8 152 78.3
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 9.3e-55 218.4 172 71.5
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 1.2e-54 218.0 178 70.2
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 1.2e-54 218.0 176 69.9
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 1.6e-54 217.6 128 85.9
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 1.6e-54 217.6 180 67.2
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 2.1e-54 217.2 173 69.9
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 2.1e-54 217.2 173 69.9
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 2.7e-54 216.9 155 76.1
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 2.7e-54 216.9 128 86.7
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 2.7e-54 216.9 139 80.6
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 4.6e-54 216.1 169 72.2
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 4.6e-54 216.1 127 85.0
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 6.0e-54 215.7 128 84.4
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 7.9e-54 215.3 148 78.4
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 1.0e-53 214.9 156 75.0
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 1.0e-53 214.9 128 85.2
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 1.0e-53 214.9 128 85.2
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 1.0e-53 214.9 174 70.7
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 1.0e-53 214.9 178 67.4
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 1.3e-53 214.5 174 70.7
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 1.3e-53 214.5 174 70.7
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 1.3e-53 214.5 166 72.3
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 1.3e-53 214.5 178 69.7
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 1.3e-53 214.5 163 71.2
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 1.3e-53 214.5 172 69.2
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 1.8e-53 214.2 178 70.2
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 1.8e-53 214.2 169 72.8
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 1.8e-53 214.2 168 70.2
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 1.8e-53 214.2 152 75.0
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 1.8e-53 214.2 174 69.5
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 2.3e-53 213.8 142 79.6
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 2.3e-53 213.8 152 75.0
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 2.3e-53 213.8 174 69.5
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 2.3e-53 213.8 185 65.9
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 2.3e-53 213.8 152 75.0
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 2.3e-53 213.8 153 75.8
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 2.3e-53 213.8 135 83.0
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 2.3e-53 213.8 135 83.0
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 3.0e-53 213.4 169 69.2
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 3.0e-53 213.4 143 78.3
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 3.9e-53 213.0 163 71.2
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 3.9e-53 213.0 178 66.9
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 5.1e-53 212.6 143 78.3
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 6.7e-53 212.2 153 74.5
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 6.7e-53 212.2 153 75.8
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 8.7e-53 211.8 132 83.3
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 8.7e-53 211.8 134 82.1
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 8.7e-53 211.8 153 75.2
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 1.1e-52 211.5 175 68.6
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 1.1e-52 211.5 173 69.4
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.1e-52 211.5 180 65.6
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 1.1e-52 211.5 177 67.8
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 1.1e-52 211.5 171 70.8
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 1.1e-52 211.5 138 80.4
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 1.1e-52 211.5 138 80.4
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 1.5e-52 211.1 174 70.7
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 1.9e-52 210.7 152 75.0
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 1.9e-52 210.7 152 75.0
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 1.9e-52 210.7 239 56.5
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 1.9e-52 210.7 181 65.7
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 2.5e-52 210.3 173 68.8
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 2.5e-52 210.3 148 75.7
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 2.5e-52 210.3 181 65.2
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 2.5e-52 210.3 181 65.2
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 2.5e-52 210.3 181 65.2
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 2.5e-52 210.3 160 71.9
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 2.5e-52 210.3 143 77.6
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 3.3e-52 209.9 172 67.4
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 3.3e-52 209.9 197 62.4
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 3.3e-52 209.9 173 69.4
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 3.3e-52 209.9 164 70.7
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 4.3e-52 209.5 132 82.6
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 4.3e-52 209.5 148 75.7
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 4.3e-52 209.5 173 69.4
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 5.6e-52 209.1 144 77.8
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 5.6e-52 209.1 206 60.7
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 7.4e-52 208.8 163 71.8
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 1.3e-51 208.0 146 76.0
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 1.3e-51 208.0 139 79.1
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.6e-51 207.6 141 78.7
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.6e-51 207.6 141 78.7
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 1.6e-51 207.6 141 78.7
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 1.6e-51 207.6 171 68.4
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 1.6e-51 207.6 171 68.4
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 2.1e-51 207.2 132 80.3
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 2.8e-51 206.8 224 58.5
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 2.8e-51 206.8 149 75.2
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 2.8e-51 206.8 172 68.6
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 3.7e-51 206.5 242 52.5
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 6.2e-51 205.7 141 78.0
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 3.1e-50 203.4 219 58.0
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 9.0e-50 201.8 221 59.3
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 1.2e-49 201.4 413 46.7
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 2.6e-49 200.3 252 52.8
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 2.6e-49 200.3 152 72.4
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 4.9e-48 196.1 171 66.1
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 1.9e-47 194.1 148 73.0
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 7.1e-47 192.2 167 66.5
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 1.2e-46 191.4 129 75.2
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 1.0e-45 188.3 100 93.0
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 2.5e-44 183.7 145 69.7
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 2.8e-43 180.3 127 78.7
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-40 171.0 127 79.5
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 8.5e-40 168.7 150 68.7
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 9.3e-39 165.2 106 79.2
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 7.9e-38 162.2 81 98.8
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 5.1e-37 159.5 81 97.5
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 7.4e-36 155.6 101 75.2
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 3.4e-33 146.7 169 52.7
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 7.7e-33 145.6 82 87.8
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 2.2e-32 144.1 82 86.6
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 5.0e-32 142.9 123 59.3
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 8.5e-32 142.1 89 77.5
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 1.6e-30 137.9 165 52.7
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 3.6e-30 136.7 127 66.1
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 1.0e-29 135.2 93 79.6
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 1.4e-29 134.8 122 63.1
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 2.3e-29 134.0 147 55.8
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 2.0e-28 131.0 148 48.6
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 2.2e-27 127.5 202 52.5
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 4.8e-27 126.3 65 96.9
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 4.8e-27 126.3 65 96.9
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 3.1e-26 123.6 70 85.7
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 2.2e-24 117.5 65 92.3
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 2.0e-20 104.4 66 80.3
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 5.3e-18 96.3 56 87.5
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 7.0e-18 95.9 56 83.9
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 1.2e-14 85.1 54 79.6
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 1.0e-13 82.0 104 44.2
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 5.2e-13 79.7 55 72.7
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 3.8e-08 63.5 90 50.0
BNapus_Darmor_BZH_scaffold_38p02420 Brassica napus HOM05D003848 ORTHO05D004616 3.2e-07 60.5 29 93.1
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 8.0e-06 55.8 67 52.2


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